RNA–Protein interactions for RNA: ENST00000468949.1

HDAC6-216, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-216ENST00000468949 SERPINI2O75830 405 aa7.29□□□□□ -1.24
HDAC6-216ENST00000468949 RCBTB2O95199 551 aa7.29□□□□□ -1.24
HDAC6-216ENST00000468949 LYPD3O95274 346 aa7.29□□□□□ -1.24
HDAC6-216ENST00000468949 HPRP00739 348 aa7.29□□□□□ -1.24
HDAC6-216ENST00000468949 ADORA3P0DMS8 318 aa7.29□□□□□ -1.24
HDAC6-216ENST00000468949 GABRA1P14867 456 aa7.29□□□□□ -1.24
HDAC6-216ENST00000468949 CPN1P15169 458 aa7.29□□□□□ -1.24
HDAC6-216ENST00000468949 FUT1P19526 365 aa7.29□□□□□ -1.24
HDAC6-216ENST00000468949 AHCYP23526 432 aa7.29□□□□□ -1.24
HDAC6-216ENST00000468949 POU1F1P28069 291 aa7.29□□□□□ -1.24
HDAC6-216ENST00000468949 PEX2P28328 305 aa7.29□□□□□ -1.24
HDAC6-216ENST00000468949 SHC1P29353 583 aa7.29□□□□□ -1.24
HDAC6-216ENST00000468949 GRPRP30550 384 aa7.29□□□□□ -1.24
HDAC6-216ENST00000468949 PTGER4P35408 488 aa7.29□□□□□ -1.24
HDAC6-216ENST00000468949 LIMS1P48059 325 aa7.29□□□□□ -1.24
HDAC6-216ENST00000468949 ALDH3A2P51648 485 aa7.29□□□□□ -1.24
HDAC6-216ENST00000468949 MLLT10P55197 1068 aa7.29□□□□□ -1.24
HDAC6-216ENST00000468949 TPD52P55327 224 aaPredicted RBP7.29□□□□□ -1.24
HDAC6-216ENST00000468949 CLDN18P56856 261 aa7.29□□□□□ -1.24
HDAC6-216ENST00000468949 RAC3P60763 192 aa7.29□□□□□ -1.24
HDAC6-216ENST00000468949 PRPS1P60891 318 aa7.29□□□□□ -1.24
HDAC6-216ENST00000468949 TSPAN31Q12999 210 aa7.29□□□□□ -1.24
HDAC6-216ENST00000468949 C1DQ13901 141 aaKnown RBP7.29□□□□□ -1.24
HDAC6-216ENST00000468949 DAG1Q14118 895 aa7.29□□□□□ -1.24
HDAC6-216ENST00000468949 PON3Q15166 354 aa7.29□□□□□ -1.24
HDAC6-216ENST00000468949 C3AR1Q16581 482 aa7.29□□□□□ -1.24
HDAC6-216ENST00000468949 RFX4Q33E94 735 aa7.29□□□□□ -1.24
HDAC6-216ENST00000468949 FBXW10Q5XX13 1052 aa7.29□□□□□ -1.24
HDAC6-216ENST00000468949 GTF2IRD2BQ6EKJ0 949 aa7.29□□□□□ -1.24
HDAC6-216ENST00000468949 TMEM225Q6GV28 225 aa7.29□□□□□ -1.24
HDAC6-216ENST00000468949 LINC00114Q6XXX2 140 aa7.29□□□□□ -1.24
HDAC6-216ENST00000468949 LIAT1Q6ZQX7 453 aa7.29□□□□□ -1.24
HDAC6-216ENST00000468949 GPAT4Q86UL3 456 aa7.29□□□□□ -1.24
HDAC6-216ENST00000468949 GTF2IRD2Q86UP8 949 aa7.29□□□□□ -1.24
HDAC6-216ENST00000468949 GGNQ86UU5 652 aa7.29□□□□□ -1.24
HDAC6-216ENST00000468949 HS3ST5Q8IZT8 346 aa7.29□□□□□ -1.24
HDAC6-216ENST00000468949 CBR4Q8N4T8 237 aa7.29□□□□□ -1.24
HDAC6-216ENST00000468949 SCAIQ8N9R8 606 aa7.29□□□□□ -1.24
HDAC6-216ENST00000468949 GALNT11Q8NCW6 608 aa7.29□□□□□ -1.24
HDAC6-216ENST00000468949 OR5M9Q8NGP3 310 aa7.29□□□□□ -1.24
HDAC6-216ENST00000468949 OR13C2Q8NGS9 318 aa7.29□□□□□ -1.24
HDAC6-216ENST00000468949 OR5J2Q8NH18 312 aa7.29□□□□□ -1.24
HDAC6-216ENST00000468949 ZNF417Q8TAU3 575 aa7.29□□□□□ -1.24
HDAC6-216ENST00000468949 OSTF1Q92882 214 aa7.29□□□□□ -1.24
HDAC6-216ENST00000468949 TAAR8Q969N4 342 aa7.29□□□□□ -1.24
HDAC6-216ENST00000468949 ZNF524Q96C55 264 aa7.29□□□□□ -1.24
HDAC6-216ENST00000468949 TRIB1Q96RU8 372 aa7.29□□□□□ -1.24
HDAC6-216ENST00000468949 ZNF587Q96SQ5 575 aaPredicted RBP7.29□□□□□ -1.24
HDAC6-216ENST00000468949 FEVQ99581 238 aa7.29□□□□□ -1.24
HDAC6-216ENST00000468949 TIMP4Q99727 224 aa7.29□□□□□ -1.24
HDAC6-216ENST00000468949 SLX1AQ9BQ83 275 aa7.29□□□□□ -1.24
HDAC6-216ENST00000468949 PRRG3Q9BZD7 231 aa7.29□□□□□ -1.24
HDAC6-216ENST00000468949 PRDM14Q9GZV8 571 aa7.29□□□□□ -1.24
HDAC6-216ENST00000468949 GABARAPL1Q9H0R8 117 aa7.29□□□□□ -1.24
HDAC6-216ENST00000468949 RASSF4Q9H2L5 321 aa7.29□□□□□ -1.24
HDAC6-216ENST00000468949 COQ10BQ9H8M1 238 aa7.29□□□□□ -1.24
HDAC6-216ENST00000468949 NTN4Q9HB63 628 aa7.29□□□□□ -1.24
HDAC6-216ENST00000468949 CHST11Q9NPF2 352 aa7.29□□□□□ -1.24
HDAC6-216ENST00000468949 MEPEQ9NQ76 525 aaPredicted RBP7.29□□□□□ -1.24
HDAC6-216ENST00000468949 C20orf141Q9NUB4 165 aa7.29□□□□□ -1.24
HDAC6-216ENST00000468949 EMC3Q9P0I2 261 aa7.29□□□□□ -1.24
HDAC6-216ENST00000468949 TRAPPC4Q9Y296 219 aa7.29□□□□□ -1.24
HDAC6-216ENST00000468949 BSNQ9UPA5 3926 aa7.29□□□□□ -1.24
HDAC6-216ENST00000468949 NINQ8N4C6 2090 aa7.29□□□□□ -1.24
HDAC6-216ENST00000468949 CNTRLQ7Z7A1 2325 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 TRAV27A0A087WT01 109 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 A0A1W2PRG6 482 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 CLCA1A8K7I4 914 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 AHRRA9YTQ3 701 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 C11orf98E9PRG8 122 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 H0YC42 278 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 SLC19A2O60779 497 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 NPIPB7O75200 414 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 AKR7A3O95154 331 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 NDUFB2O95178 105 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 SOX14O95416 240 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 GASTP01350 101 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 BGLAPP02818 100 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 IMPDH2P12268 514 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 MAKP20794 623 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 PRKACGP22612 351 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 NOS3P29474 1203 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 SLC6A6P31641 620 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 OMPP47874 163 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 TDGF1P3P51864 188 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 SUCLG1P53597 346 aaKnown RBP7.28□□□□□ -1.24
HDAC6-216ENST00000468949 PER3P56645 1201 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 EGR4Q05215 589 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 PUDPQ08623 228 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 COX10Q12887 443 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 ZNF239Q16600 458 aaKnown RBP7.28□□□□□ -1.24
HDAC6-216ENST00000468949 ANKDD1AQ495B1 522 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 ZBED5Q49AG3 693 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 ALG10Q5BKT4 473 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 C1QL3Q5VWW1 255 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 LPCAT4Q643R3 524 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 ZNF324BQ6AW86 544 aaPredicted RBP7.28□□□□□ -1.24
HDAC6-216ENST00000468949 C1orf94Q6P1W5 598 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 SMARCD3Q6STE5 483 aa7.28□□□□□ -1.24
HDAC6-216ENST00000468949 PAQR6Q6TCH4 344 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms