RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 PRAMEF7Q5VXH5 474 aa15.04■□□□□ -0
TRIM56-203ENST00000467847 FAM166AQ6J272 317 aa15.04■□□□□ -0
TRIM56-203ENST00000467847 CREB3L2Q70SY1 520 aa15.04■□□□□ -0
TRIM56-203ENST00000467847 C3orf49Q96BT1 292 aa15.04■□□□□ -0
TRIM56-203ENST00000467847 VRK1Q99986 396 aaPredicted RBP15.04■□□□□ -0
TRIM56-203ENST00000467847 KATNB1Q9BVA0 655 aa15.04■□□□□ -0
TRIM56-203ENST00000467847 WDR55Q9H6Y2 383 aaPredicted RBP15.04■□□□□ -0
TRIM56-203ENST00000467847 CHODLQ9H9P2 273 aa15.04■□□□□ -0
TRIM56-203ENST00000467847 CA10Q9NS85 328 aa15.04■□□□□ -0
TRIM56-203ENST00000467847 SLC6A13Q9NSD5 602 aa15.04■□□□□ -0
TRIM56-203ENST00000467847 CALML5Q9NZT1 146 aa15.04■□□□□ -0
TRIM56-203ENST00000467847 KCNS2Q9ULS6 477 aa15.04■□□□□ -0
TRIM56-203ENST00000467847 ZNF443Q9Y2A4 671 aaPredicted RBP15.04■□□□□ -0
TRIM56-203ENST00000467847 LOC100289279A0A1B0GTE1 492 aa15.03■□□□□ -0
TRIM56-203ENST00000467847 OR6C65A6NJZ3 312 aa15.03■□□□□ -0
TRIM56-203ENST00000467847 FRS3O43559 492 aa15.03■□□□□ -0
TRIM56-203ENST00000467847 IL6P05231 212 aa15.03■□□□□ -0
TRIM56-203ENST00000467847 BCHEP06276 602 aa15.03■□□□□ -0
TRIM56-203ENST00000467847 ETFAP13804 333 aa15.03■□□□□ -0
TRIM56-203ENST00000467847 SRD5A1P18405 259 aa15.03■□□□□ -0
TRIM56-203ENST00000467847 PAX7P23759 505 aa15.03■□□□□ -0
TRIM56-203ENST00000467847 IGFBP5P24593 272 aa15.03■□□□□ -0
TRIM56-203ENST00000467847 CRATP43155 626 aa15.03■□□□□ -0
TRIM56-203ENST00000467847 NR4A2P43354 598 aa15.03■□□□□ -0
TRIM56-203ENST00000467847 CRISP3P54108 245 aa15.03■□□□□ -0
TRIM56-203ENST00000467847 LARS2Q15031 903 aaKnown RBP15.03■□□□□ -0
TRIM56-203ENST00000467847 RNF220Q5VTB9 566 aa15.03■□□□□ -0
TRIM56-203ENST00000467847 NIPAL3Q6P499 406 aa15.03■□□□□ -0
TRIM56-203ENST00000467847 ANKS4BQ8N8V4 417 aa15.03■□□□□ -0
TRIM56-203ENST00000467847 GLB1L3Q8NCI6 653 aaPredicted RBP15.03■□□□□ -0
TRIM56-203ENST00000467847 SLC38A5Q8WUX1 472 aa15.03■□□□□ -0
TRIM56-203ENST00000467847 CACYBPQ9HB71 228 aaKnown RBP15.03■□□□□ -0
TRIM56-203ENST00000467847 MYOZ1Q9NP98 299 aaPredicted RBP15.03■□□□□ -0
TRIM56-203ENST00000467847 RASD1Q9Y272 281 aa15.03■□□□□ -0
TRIM56-203ENST00000467847 A0A096LPE4 126 aa15.02■□□□□ -0
TRIM56-203ENST00000467847 A0A096LPI6 279 aa15.02■□□□□ -0
TRIM56-203ENST00000467847 A0A1W2PPZ6 126 aa15.02■□□□□ -0
TRIM56-203ENST00000467847 LOC390937A0A1W2PQ73 354 aa15.02■□□□□ -0
TRIM56-203ENST00000467847 TRPC5OSA6NMA1 111 aa15.02■□□□□ -0
TRIM56-203ENST00000467847 B9A039 149 aa15.02■□□□□ -0
TRIM56-203ENST00000467847 NR5A2O00482 541 aa15.02■□□□□ -0
TRIM56-203ENST00000467847 ANP32DO95626 131 aa15.02■□□□□ -0
TRIM56-203ENST00000467847 TFPTP0C1Z6 253 aa15.02■□□□□ -0
TRIM56-203ENST00000467847 OR4A8P0C604 315 aa15.02■□□□□ -0
TRIM56-203ENST00000467847 PRG2P13727 222 aa15.02■□□□□ -0
TRIM56-203ENST00000467847 APEHP13798 732 aaKnown RBP15.02■□□□□ -0
TRIM56-203ENST00000467847 MVDP53602 400 aa15.02■□□□□ -0
TRIM56-203ENST00000467847 DSTNP60981 165 aa15.02■□□□□ -0
TRIM56-203ENST00000467847 TUBA1BP68363 451 aa15.02■□□□□ -0
TRIM56-203ENST00000467847 TUBA4AP68366 448 aa15.02■□□□□ -0
TRIM56-203ENST00000467847 ZSWIM7Q19AV6 140 aa15.02■□□□□ -0
TRIM56-203ENST00000467847 KRTAP24-1Q3LI83 254 aa15.02■□□□□ -0
TRIM56-203ENST00000467847 RPS26P11Q5JNZ5 115 aaPredicted RBP15.02■□□□□ -0
TRIM56-203ENST00000467847 VHLLQ6RSH7 139 aa15.02■□□□□ -0
TRIM56-203ENST00000467847 TUBA1AQ71U36 451 aa15.02■□□□□ -0
TRIM56-203ENST00000467847 LINGO2Q7L985 606 aa15.02■□□□□ -0
TRIM56-203ENST00000467847 EPHX4Q8IUS5 362 aa15.02■□□□□ -0
TRIM56-203ENST00000467847 CLIP4Q8N3C7 705 aa15.02■□□□□ -0
TRIM56-203ENST00000467847 BCL2L2Q92843 193 aaPredicted RBP15.02■□□□□ -0
TRIM56-203ENST00000467847 ZBTB9Q96C00 473 aa15.02■□□□□ -0
TRIM56-203ENST00000467847 MSI2Q96DH6 328 aaKnown RBP15.02■□□□□ -0
TRIM56-203ENST00000467847 FOXN4Q96NZ1 517 aa15.02■□□□□ -0
TRIM56-203ENST00000467847 PRR14Q9BWN1 585 aa15.02■□□□□ -0
TRIM56-203ENST00000467847 ARMC7Q9H6L4 198 aa15.02■□□□□ -0
TRIM56-203ENST00000467847 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.02■□□□□ -0
TRIM56-203ENST00000467847 ZNF232Q9UNY5 417 aa15.02■□□□□ -0
TRIM56-203ENST00000467847 V9GYY5 206 aaPredicted RBP15.02■□□□□ -0
TRIM56-203ENST00000467847 ARPC4-TTLL3A0A0A6YYG9 625 aa15.01□□□□□ -0.01
TRIM56-203ENST00000467847 IGHV4-61A0A0C4DH41 118 aa15.01□□□□□ -0.01
TRIM56-203ENST00000467847 SLC35F4A4IF30 521 aa15.01□□□□□ -0.01
TRIM56-203ENST00000467847 HDAC3O15379 428 aa15.01□□□□□ -0.01
TRIM56-203ENST00000467847 NPIPB7O75200 414 aa15.01□□□□□ -0.01
TRIM56-203ENST00000467847 UPK3AO75631 287 aa15.01□□□□□ -0.01
TRIM56-203ENST00000467847 SLC22A3O75751 556 aa15.01□□□□□ -0.01
TRIM56-203ENST00000467847 AHSA1O95433 338 aa15.01□□□□□ -0.01
TRIM56-203ENST00000467847 CECR9P0C854 216 aa15.01□□□□□ -0.01
TRIM56-203ENST00000467847 KITP10721 976 aa15.01□□□□□ -0.01
TRIM56-203ENST00000467847 IDO1P14902 403 aa15.01□□□□□ -0.01
TRIM56-203ENST00000467847 THBS2P35442 1172 aa15.01□□□□□ -0.01
TRIM56-203ENST00000467847 NAAAQ02083 359 aa15.01□□□□□ -0.01
TRIM56-203ENST00000467847 ADIPOQQ15848 244 aa15.01□□□□□ -0.01
TRIM56-203ENST00000467847 IQCCQ4KMZ1 466 aa15.01□□□□□ -0.01
TRIM56-203ENST00000467847 CEP85LQ5SZL2 805 aa15.01□□□□□ -0.01
TRIM56-203ENST00000467847 FAM120AOSQ5T036 256 aa15.01□□□□□ -0.01
TRIM56-203ENST00000467847 HHATQ5VTY9 493 aa15.01□□□□□ -0.01
TRIM56-203ENST00000467847 NXNQ6DKJ4 435 aa15.01□□□□□ -0.01
TRIM56-203ENST00000467847 ANKRD16Q6P6B7 361 aa15.01□□□□□ -0.01
TRIM56-203ENST00000467847 IL17RELQ6ZVW7 336 aa15.01□□□□□ -0.01
TRIM56-203ENST00000467847 SERPINA11Q86U17 422 aa15.01□□□□□ -0.01
TRIM56-203ENST00000467847 ANKRD42Q8N9B4 389 aa15.01□□□□□ -0.01
TRIM56-203ENST00000467847 SLC25A36Q96CQ1 311 aa15.01□□□□□ -0.01
TRIM56-203ENST00000467847 ZNF317Q96PQ6 595 aaPredicted RBP15.01□□□□□ -0.01
TRIM56-203ENST00000467847 TPT1P8Q9HAU6 139 aa15.01□□□□□ -0.01
TRIM56-203ENST00000467847 CRNNQ9UBG3 495 aaPredicted RBP15.01□□□□□ -0.01
TRIM56-203ENST00000467847 TMEM247A6NEH6 219 aa15□□□□□ -0.01
TRIM56-203ENST00000467847 TMEM229AB2RXF0 380 aa15□□□□□ -0.01
TRIM56-203ENST00000467847 PDE5AO76074 875 aa15□□□□□ -0.01
TRIM56-203ENST00000467847 HNF1AP20823 631 aa15□□□□□ -0.01
TRIM56-203ENST00000467847 RPS5P46782 204 aaKnown RBP15□□□□□ -0.01
TRIM56-203ENST00000467847 SH3BGRP55822 239 aaPredicted RBP15□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms