RNA–Protein interactions for RNA: ENST00000467838.2

SEC16A-208, Transcript of SEC16 homolog A, endoplasmic reticulum export factor, humanhuman

TSL 2

Gene SEC16A, Length 1,988 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC16A-208ENST00000467838 ACSM4P0C7M7 580 aa13.3□□□□□ -0.28
SEC16A-208ENST00000467838 GABRA3P34903 492 aa13.3□□□□□ -0.28
SEC16A-208ENST00000467838 RAD52P43351 418 aa13.3□□□□□ -0.28
SEC16A-208ENST00000467838 P2RX1P51575 399 aa13.3□□□□□ -0.28
SEC16A-208ENST00000467838 PON3Q15166 354 aa13.3□□□□□ -0.28
SEC16A-208ENST00000467838 ALG10BQ5I7T1 473 aa13.3□□□□□ -0.28
SEC16A-208ENST00000467838 HES5Q5TA89 166 aa13.3□□□□□ -0.28
SEC16A-208ENST00000467838 FCRL6Q6DN72 434 aa13.3□□□□□ -0.28
SEC16A-208ENST00000467838 FAM198BQ6UWH4 519 aa13.3□□□□□ -0.28
SEC16A-208ENST00000467838 KIAA1324Q6UXG2 1013 aaKnown RBP13.3□□□□□ -0.28
SEC16A-208ENST00000467838 VITQ6UXI7 678 aa13.3□□□□□ -0.28
SEC16A-208ENST00000467838 DPY19L2P2Q6ZN68 376 aa13.3□□□□□ -0.28
SEC16A-208ENST00000467838 CAMKVQ8NCB2 501 aa13.3□□□□□ -0.28
SEC16A-208ENST00000467838 GALNT11Q8NCW6 608 aa13.3□□□□□ -0.28
SEC16A-208ENST00000467838 NPEPL1Q8NDH3 523 aa13.3□□□□□ -0.28
SEC16A-208ENST00000467838 TMEM52Q8NDY8 209 aa13.3□□□□□ -0.28
SEC16A-208ENST00000467838 FCAMRQ8WWV6 532 aa13.3□□□□□ -0.28
SEC16A-208ENST00000467838 CDCP1Q9H5V8 836 aa13.3□□□□□ -0.28
SEC16A-208ENST00000467838 CA10Q9NS85 328 aa13.3□□□□□ -0.28
SEC16A-208ENST00000467838 MOSPD1Q9UJG1 213 aa13.3□□□□□ -0.28
SEC16A-208ENST00000467838 PCOLCE2Q9UKZ9 415 aa13.3□□□□□ -0.28
SEC16A-208ENST00000467838 MCIDASD6RGH6 385 aa13.29□□□□□ -0.28
SEC16A-208ENST00000467838 ACOT7O00154 380 aa13.29□□□□□ -0.28
SEC16A-208ENST00000467838 B3GALNT1O75752 331 aa13.29□□□□□ -0.28
SEC16A-208ENST00000467838 NDUFB6O95139 128 aa13.29□□□□□ -0.28
SEC16A-208ENST00000467838 EML2O95834 649 aa13.29□□□□□ -0.28
SEC16A-208ENST00000467838 CT62P0C5K7 136 aa13.29□□□□□ -0.28
SEC16A-208ENST00000467838 SPI1P17947 270 aa13.29□□□□□ -0.28
SEC16A-208ENST00000467838 CALCRP30988 508 aa13.29□□□□□ -0.28
SEC16A-208ENST00000467838 EMDP50402 254 aa13.29□□□□□ -0.28
SEC16A-208ENST00000467838 SGCGQ13326 291 aa13.29□□□□□ -0.28
SEC16A-208ENST00000467838 ZNF267Q14586 743 aaPredicted RBP13.29□□□□□ -0.28
SEC16A-208ENST00000467838 EXOSC7Q15024 291 aaKnown RBP13.29□□□□□ -0.28
SEC16A-208ENST00000467838 APOOLQ6UXV4 268 aa13.29□□□□□ -0.28
SEC16A-208ENST00000467838 C3P1Q6ZMU1 363 aa13.29□□□□□ -0.28
SEC16A-208ENST00000467838 SLC35F3Q8IY50 421 aa13.29□□□□□ -0.28
SEC16A-208ENST00000467838 PCNPQ8WW12 178 aaKnown RBP13.29□□□□□ -0.28
SEC16A-208ENST00000467838 ZNRF4Q8WWF5 429 aa13.29□□□□□ -0.28
SEC16A-208ENST00000467838 GCDHQ92947 438 aaPredicted RBP13.29□□□□□ -0.28
SEC16A-208ENST00000467838 SFXN2Q96NB2 322 aa13.29□□□□□ -0.28
SEC16A-208ENST00000467838 PTCHD1Q96NR3 888 aa13.29□□□□□ -0.28
SEC16A-208ENST00000467838 GPX7Q96SL4 187 aaPredicted RBP13.29□□□□□ -0.28
SEC16A-208ENST00000467838 SEC22CQ9BRL7 303 aa13.29□□□□□ -0.28
SEC16A-208ENST00000467838 LMF2Q9BU23 707 aaKnown RBP13.29□□□□□ -0.28
SEC16A-208ENST00000467838 SLC17A9Q9BYT1 436 aa13.29□□□□□ -0.28
SEC16A-208ENST00000467838 PPA2Q9H2U2 334 aa13.29□□□□□ -0.28
SEC16A-208ENST00000467838 NKX2-4Q9H2Z4 354 aa13.29□□□□□ -0.28
SEC16A-208ENST00000467838 CCDC86Q9H6F5 360 aaKnown RBP13.29□□□□□ -0.28
SEC16A-208ENST00000467838 LIN7BQ9HAP6 207 aa13.29□□□□□ -0.28
SEC16A-208ENST00000467838 NOX3Q9HBY0 568 aa13.29□□□□□ -0.28
SEC16A-208ENST00000467838 MRPL15Q9P015 296 aaKnown RBP13.29□□□□□ -0.28
SEC16A-208ENST00000467838 HCN3Q9P1Z3 774 aa13.29□□□□□ -0.28
SEC16A-208ENST00000467838 OR5V1Q9UGF6 321 aa13.29□□□□□ -0.28
SEC16A-208ENST00000467838 PPIEQ9UNP9 301 aaKnown RBP13.29□□□□□ -0.28
SEC16A-208ENST00000467838 IER3IP1Q9Y5U9 82 aa13.29□□□□□ -0.28
SEC16A-208ENST00000467838 KCNMB2Q9Y691 235 aa13.29□□□□□ -0.28
SEC16A-208ENST00000467838 V9GY05 133 aa13.29□□□□□ -0.28
SEC16A-208ENST00000467838 C2orf16Q68DN1 1984 aa13.29□□□□□ -0.28
SEC16A-208ENST00000467838 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.29□□□□□ -0.28
SEC16A-208ENST00000467838 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.29□□□□□ -0.28
SEC16A-208ENST00000467838 PRSS38A1L453 326 aa13.29□□□□□ -0.28
SEC16A-208ENST00000467838 ACOD1A6NK06 481 aa13.29□□□□□ -0.28
SEC16A-208ENST00000467838 TRIM77I1YAP6 450 aa13.29□□□□□ -0.28
SEC16A-208ENST00000467838 PLRG1O43660 514 aaKnown RBP13.29□□□□□ -0.28
SEC16A-208ENST00000467838 CREBL2O60519 120 aaPredicted RBP13.29□□□□□ -0.28
SEC16A-208ENST00000467838 SELENOFO60613 162 aa13.29□□□□□ -0.28
SEC16A-208ENST00000467838 CBX7O95931 251 aa13.29□□□□□ -0.28
SEC16A-208ENST00000467838 HOXD4P09016 255 aaPredicted RBP13.29□□□□□ -0.28
SEC16A-208ENST00000467838 SCAND1P57086 179 aa13.29□□□□□ -0.28
SEC16A-208ENST00000467838 RPS4XP62701 263 aaKnown RBP13.29□□□□□ -0.28
SEC16A-208ENST00000467838 LINC00303Q3SY05 128 aa13.29□□□□□ -0.28
SEC16A-208ENST00000467838 B3GNTL1Q67FW5 361 aaPredicted RBP13.29□□□□□ -0.28
SEC16A-208ENST00000467838 ULK3Q6PHR2 472 aa13.29□□□□□ -0.28
SEC16A-208ENST00000467838 FCRLAQ7L513 359 aa13.29□□□□□ -0.28
SEC16A-208ENST00000467838 LHFPL5Q8TAF8 219 aa13.29□□□□□ -0.28
SEC16A-208ENST00000467838 MIB2Q96AX9 1013 aa13.29□□□□□ -0.28
SEC16A-208ENST00000467838 ARSGQ96EG1 525 aa13.29□□□□□ -0.28
SEC16A-208ENST00000467838 SGTBQ96EQ0 304 aa13.29□□□□□ -0.28
SEC16A-208ENST00000467838 ELMOD3Q96FG2 381 aa13.29□□□□□ -0.28
SEC16A-208ENST00000467838 RBM18Q96H35 190 aaKnown RBP13.29□□□□□ -0.28
SEC16A-208ENST00000467838 SLC25A18Q9H1K4 315 aa13.29□□□□□ -0.28
SEC16A-208ENST00000467838 SRMSQ9H3Y6 488 aa13.29□□□□□ -0.28
SEC16A-208ENST00000467838 TRPV4Q9HBA0 871 aa13.29□□□□□ -0.28
SEC16A-208ENST00000467838 GPN1Q9HCN4 374 aaPredicted RBP13.29□□□□□ -0.28
SEC16A-208ENST00000467838 DPP7Q9UHL4 492 aa13.29□□□□□ -0.28
SEC16A-208ENST00000467838 MRPS2Q9Y399 296 aaKnown RBP13.29□□□□□ -0.28
SEC16A-208ENST00000467838 CHD9Q3L8U1 2897 aa13.28□□□□□ -0.28
SEC16A-208ENST00000467838 A0A1W2PQU0 124 aa13.28□□□□□ -0.28
SEC16A-208ENST00000467838 KHDRBS3O75525 346 aaKnown RBP13.28□□□□□ -0.28
SEC16A-208ENST00000467838 ALDOBP05062 364 aa13.28□□□□□ -0.28
SEC16A-208ENST00000467838 HOXC4P09017 264 aaPredicted RBP13.28□□□□□ -0.28
SEC16A-208ENST00000467838 FCARP24071 287 aa13.28□□□□□ -0.28
SEC16A-208ENST00000467838 GJA4P35212 333 aa13.28□□□□□ -0.28
SEC16A-208ENST00000467838 PSMB10P40306 273 aa13.28□□□□□ -0.28
SEC16A-208ENST00000467838 KIAA1024LP59773 190 aa13.28□□□□□ -0.28
SEC16A-208ENST00000467838 NANOS3P60323 173 aaKnown RBP13.28□□□□□ -0.28
SEC16A-208ENST00000467838 TMEM69Q5SWH9 247 aa13.28□□□□□ -0.28
SEC16A-208ENST00000467838 LINC01590Q5TEZ4 76 aa13.28□□□□□ -0.28
SEC16A-208ENST00000467838 SLC6A19Q695T7 634 aa13.28□□□□□ -0.28
SEC16A-208ENST00000467838 SLC25A25Q6KCM7 469 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms