RNA–Protein interactions for RNA: ENST00000467663.5

CTNS-205, Transcript of cystinosin, lysosomal cystine transporter, human

TSL 3

Gene CTNS, Length 590 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CTNS-205	ENST00000467663	OSM	P13725	252 aa		10.85	□□□□□ -0.67
CTNS-205	ENST00000467663	APOBEC1	P41238	236 aa	Known RBP	10.85	□□□□□ -0.67
CTNS-205	ENST00000467663	GSS	P48637	474 aa		10.85	□□□□□ -0.67
CTNS-205	ENST00000467663	SLC9A3	P48764	834 aa		10.85	□□□□□ -0.67
CTNS-205	ENST00000467663	ZNF41	P51814	821 aa	Predicted RBP	10.85	□□□□□ -0.67
CTNS-205	ENST00000467663	POLR2H	P52434	150 aa	Known RBP	10.85	□□□□□ -0.67
CTNS-205	ENST00000467663	ADARB1	P78563	741 aa	Known RBP	10.85	□□□□□ -0.67
CTNS-205	ENST00000467663	HOXC5	Q00444	222 aa		10.85	□□□□□ -0.67
CTNS-205	ENST00000467663	NPRL3	Q12980	569 aa		10.85	□□□□□ -0.67
CTNS-205	ENST00000467663	RASSF6	Q6ZTQ3	369 aa		10.85	□□□□□ -0.67
CTNS-205	ENST00000467663	SEM1	Q6ZVN7	128 aa		10.85	□□□□□ -0.67
CTNS-205	ENST00000467663	ATG4D	Q86TL0	474 aa	Predicted RBP	10.85	□□□□□ -0.67
CTNS-205	ENST00000467663	TSPYL5	Q86VY4	417 aa	Predicted RBP	10.85	□□□□□ -0.67
CTNS-205	ENST00000467663	PLCZ1	Q86YW0	608 aa		10.85	□□□□□ -0.67
CTNS-205	ENST00000467663	LIX1L	Q8IVB5	337 aa		10.85	□□□□□ -0.67
CTNS-205	ENST00000467663	NKAIN4	Q8IVV8	208 aa		10.85	□□□□□ -0.67
CTNS-205	ENST00000467663	FADS6	Q8N9I5	356 aa		10.85	□□□□□ -0.67
CTNS-205	ENST00000467663	WDSUB1	Q8N9V3	476 aa		10.85	□□□□□ -0.67
CTNS-205	ENST00000467663	STK35	Q8TDR2	534 aa		10.85	□□□□□ -0.67
CTNS-205	ENST00000467663	LIPH	Q8WWY8	451 aa		10.85	□□□□□ -0.67
CTNS-205	ENST00000467663	ZBTB8A	Q96BR9	441 aa		10.85	□□□□□ -0.67
CTNS-205	ENST00000467663	HRASLS5	Q96KN8	279 aa		10.85	□□□□□ -0.67
CTNS-205	ENST00000467663	APOL4	Q9BPW4	351 aa		10.85	□□□□□ -0.67
CTNS-205	ENST00000467663	PRRG3	Q9BZD7	231 aa		10.85	□□□□□ -0.67
CTNS-205	ENST00000467663	GRIP2	Q9C0E4	1043 aa		10.85	□□□□□ -0.67
CTNS-205	ENST00000467663	NDEL1	Q9GZM8	345 aa		10.85	□□□□□ -0.67
CTNS-205	ENST00000467663	TOR3A	Q9H497	397 aa		10.85	□□□□□ -0.67
CTNS-205	ENST00000467663	FAM118A	Q9NWS6	357 aa		10.85	□□□□□ -0.67
CTNS-205	ENST00000467663	MAGED1	Q9Y5V3	778 aa	Predicted RBP	10.85	□□□□□ -0.67
CTNS-205	ENST00000467663	SPIN1	Q9Y657	262 aa	Predicted RBP	10.85	□□□□□ -0.67
CTNS-205	ENST00000467663	NCKAP5	O14513	1909 aa		10.84	□□□□□ -0.67
CTNS-205	ENST00000467663	LOC100130705	A0A1B0GUX0	176 aa		10.84	□□□□□ -0.67
CTNS-205	ENST00000467663	OR2T1	O43869	369 aa		10.84	□□□□□ -0.67
CTNS-205	ENST00000467663	MPZL2	O60487	215 aa		10.84	□□□□□ -0.67
CTNS-205	ENST00000467663	ADAM11	O75078	769 aa		10.84	□□□□□ -0.67
CTNS-205	ENST00000467663	RCBTB2	O95199	551 aa		10.84	□□□□□ -0.67
CTNS-205	ENST00000467663	THY1	P04216	161 aa		10.84	□□□□□ -0.67
CTNS-205	ENST00000467663	BMP7	P18075	431 aa		10.84	□□□□□ -0.67
CTNS-205	ENST00000467663	MYF6	P23409	242 aa		10.84	□□□□□ -0.67
CTNS-205	ENST00000467663	CXCR1	P25024	350 aa		10.84	□□□□□ -0.67
CTNS-205	ENST00000467663	OMP	P47874	163 aa		10.84	□□□□□ -0.67
CTNS-205	ENST00000467663	CLK1	P49759	484 aa	Known RBP	10.84	□□□□□ -0.67
CTNS-205	ENST00000467663	MFSD13A	Q14CX5	517 aa		10.84	□□□□□ -0.67
CTNS-205	ENST00000467663	QPRT	Q15274	297 aa		10.84	□□□□□ -0.67
CTNS-205	ENST00000467663	SF3B4	Q15427	424 aa	Known RBP eCLIP	10.84	□□□□□ -0.67
CTNS-205	ENST00000467663	SEC23B	Q15437	767 aa		10.84	□□□□□ -0.67
CTNS-205	ENST00000467663	SLC25A35	Q3KQZ1	300 aa		10.84	□□□□□ -0.67
CTNS-205	ENST00000467663	ACSF3	Q4G176	576 aa	Predicted RBP	10.84	□□□□□ -0.67
CTNS-205	ENST00000467663	WIPI1	Q5MNZ9	446 aa	Predicted RBP	10.84	□□□□□ -0.67
CTNS-205	ENST00000467663	USP51	Q70EK9	711 aa		10.84	□□□□□ -0.67
CTNS-205	ENST00000467663	ZER1	Q7Z7L7	766 aa		10.84	□□□□□ -0.67
CTNS-205	ENST00000467663	DMRTC2	Q8IXT2	367 aa	Predicted RBP	10.84	□□□□□ -0.67
CTNS-205	ENST00000467663	PM20D2	Q8IYS1	436 aa		10.84	□□□□□ -0.67
CTNS-205	ENST00000467663	DEPDC4	Q8N2C3	294 aa		10.84	□□□□□ -0.67
CTNS-205	ENST00000467663	FAM83F	Q8NEG4	500 aa	Predicted RBP	10.84	□□□□□ -0.67
CTNS-205	ENST00000467663	OR4K17	Q8NGC6	315 aa		10.84	□□□□□ -0.67
CTNS-205	ENST00000467663	OR9Q2	Q8NGE9	314 aa		10.84	□□□□□ -0.67
CTNS-205	ENST00000467663	RNF217	Q8TC41	542 aa		10.84	□□□□□ -0.67
CTNS-205	ENST00000467663	OSTF1	Q92882	214 aa		10.84	□□□□□ -0.67
CTNS-205	ENST00000467663	SH3YL1	Q96HL8	342 aa	Predicted RBP	10.84	□□□□□ -0.67
CTNS-205	ENST00000467663	PITX2	Q99697	317 aa		10.84	□□□□□ -0.67
CTNS-205	ENST00000467663	PRR14	Q9BWN1	585 aa		10.84	□□□□□ -0.67
CTNS-205	ENST00000467663	YTHDF1	Q9BYJ9	559 aa	Known RBP	10.84	□□□□□ -0.67
CTNS-205	ENST00000467663	RTN4R	Q9BZR6	473 aa		10.84	□□□□□ -0.67
CTNS-205	ENST00000467663	GALNT9	Q9HCQ5	603 aa		10.84	□□□□□ -0.67
CTNS-205	ENST00000467663	CTPS2	Q9NRF8	586 aa		10.84	□□□□□ -0.67
CTNS-205	ENST00000467663	SERINC1	Q9NRX5	453 aa		10.84	□□□□□ -0.67
CTNS-205	ENST00000467663	SLC6A5	Q9Y345	797 aa		10.84	□□□□□ -0.67
CTNS-205	ENST00000467663	C2orf72	A6NCS6	295 aa		10.83	□□□□□ -0.68
CTNS-205	ENST00000467663	HSPB2	A8KAH6	182 aa		10.83	□□□□□ -0.68
CTNS-205	ENST00000467663		E9PQ18	207 aa		10.83	□□□□□ -0.68
CTNS-205	ENST00000467663	LINC01387	J3KSC0	135 aa		10.83	□□□□□ -0.68
CTNS-205	ENST00000467663	ZNF208	O43345	1280 aa		10.83	□□□□□ -0.68
CTNS-205	ENST00000467663	KLF4	O43474	513 aa		10.83	□□□□□ -0.68
CTNS-205	ENST00000467663	ACTL6A	O96019	429 aa		10.83	□□□□□ -0.68
CTNS-205	ENST00000467663	TACR3	P29371	465 aa		10.83	□□□□□ -0.68
CTNS-205	ENST00000467663	CEACAM8	P31997	349 aa	Predicted RBP	10.83	□□□□□ -0.68
CTNS-205	ENST00000467663	TIMP3	P35625	211 aa		10.83	□□□□□ -0.68
CTNS-205	ENST00000467663	CRISP1	P54107	249 aa		10.83	□□□□□ -0.68
CTNS-205	ENST00000467663	DSCR4	P56555	118 aa	Predicted RBP	10.83	□□□□□ -0.68
CTNS-205	ENST00000467663	CSNK2B	P67870	215 aa		10.83	□□□□□ -0.68
CTNS-205	ENST00000467663	TEK	Q02763	1124 aa		10.83	□□□□□ -0.68
CTNS-205	ENST00000467663	TLE4	Q04727	773 aa		10.83	□□□□□ -0.68
CTNS-205	ENST00000467663	LAPTM4A	Q15012	233 aa		10.83	□□□□□ -0.68
CTNS-205	ENST00000467663	TOMM20	Q15388	145 aa		10.83	□□□□□ -0.68
CTNS-205	ENST00000467663	HSPB2	Q16082	182 aa		10.83	□□□□□ -0.68
CTNS-205	ENST00000467663	NDUFAF6	Q330K2	333 aa		10.83	□□□□□ -0.68
CTNS-205	ENST00000467663	NSUN5P2	Q63ZY6	315 aa		10.83	□□□□□ -0.68
CTNS-205	ENST00000467663	KRT80	Q6KB66	452 aa		10.83	□□□□□ -0.68
CTNS-205	ENST00000467663	KLHL17	Q6TDP4	642 aa		10.83	□□□□□ -0.68
CTNS-205	ENST00000467663	YRDC	Q86U90	279 aa	Known RBP	10.83	□□□□□ -0.68
CTNS-205	ENST00000467663	NRM	Q8IXM6	262 aa		10.83	□□□□□ -0.68
CTNS-205	ENST00000467663	C8orf59	Q8N0T1	100 aa	Predicted RBP	10.83	□□□□□ -0.68
CTNS-205	ENST00000467663	OR2M3	Q8NG83	312 aa		10.83	□□□□□ -0.68
CTNS-205	ENST00000467663	SLC25A43	Q8WUT9	341 aa	Predicted RBP	10.83	□□□□□ -0.68
CTNS-205	ENST00000467663	TMEM255B	Q8WV15	326 aa		10.83	□□□□□ -0.68
CTNS-205	ENST00000467663	TRUB1	Q8WWH5	349 aa	Known RBP	10.83	□□□□□ -0.68
CTNS-205	ENST00000467663	CYGB	Q8WWM9	190 aa		10.83	□□□□□ -0.68
CTNS-205	ENST00000467663	ABTB1	Q969K4	478 aa	Predicted RBP	10.83	□□□□□ -0.68
CTNS-205	ENST00000467663	BPIFA2	Q96DR5	249 aa		10.83	□□□□□ -0.68

Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms