RNA–Protein interactions for RNA: ENST00000467533.5

HDAC3-203, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 663 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-203ENST00000467533 ADAMTS15Q8TE58 950 aa8.7□□□□□ -1.02
HDAC3-203ENST00000467533 ZDHHC16Q969W1 377 aa8.7□□□□□ -1.02
HDAC3-203ENST00000467533 DDIT4LQ96D03 193 aa8.7□□□□□ -1.02
HDAC3-203ENST00000467533 FAM120BQ96EK7 910 aaKnown RBP8.7□□□□□ -1.02
HDAC3-203ENST00000467533 KTI12Q96EK9 354 aaPredicted RBP8.7□□□□□ -1.02
HDAC3-203ENST00000467533 ZNF382Q96SR6 550 aa8.7□□□□□ -1.02
HDAC3-203ENST00000467533 OSBPL9Q96SU4 736 aa8.7□□□□□ -1.02
HDAC3-203ENST00000467533 KRTAP17-1Q9BYP8 105 aa8.7□□□□□ -1.02
HDAC3-203ENST00000467533 SERHL2Q9H4I8 314 aa8.7□□□□□ -1.02
HDAC3-203ENST00000467533 MMP26Q9NRE1 261 aa8.7□□□□□ -1.02
HDAC3-203ENST00000467533 ASH2LQ9UBL3 628 aa8.7□□□□□ -1.02
HDAC3-203ENST00000467533 JRKLQ9Y4A0 524 aa8.7□□□□□ -1.02
HDAC3-203ENST00000467533 TIMM22Q9Y584 194 aa8.7□□□□□ -1.02
HDAC3-203ENST00000467533 SOX21Q9Y651 276 aaPredicted RBP8.7□□□□□ -1.02
HDAC3-203ENST00000467533 COL7A1Q02388 2944 aa8.7□□□□□ -1.02
HDAC3-203ENST00000467533 C5orf63A6NC05 138 aa8.69□□□□□ -1.02
HDAC3-203ENST00000467533 A8MT66 165 aa8.69□□□□□ -1.02
HDAC3-203ENST00000467533 C17orf100A8MU93 164 aa8.69□□□□□ -1.02
HDAC3-203ENST00000467533 TRAF3IP2O43734 574 aaPredicted RBP8.69□□□□□ -1.02
HDAC3-203ENST00000467533 PIP5K1CO60331 668 aa8.69□□□□□ -1.02
HDAC3-203ENST00000467533 ERLIN1O75477 346 aa8.69□□□□□ -1.02
HDAC3-203ENST00000467533 UPK3AO75631 287 aa8.69□□□□□ -1.02
HDAC3-203ENST00000467533 RSL1D1O76021 490 aaKnown RBP8.69□□□□□ -1.02
HDAC3-203ENST00000467533 SUPT7LO94864 414 aa8.69□□□□□ -1.02
HDAC3-203ENST00000467533 IGHV4-38-2P0DP08 117 aa8.69□□□□□ -1.02
HDAC3-203ENST00000467533 EFNA1P20827 205 aaPredicted RBP8.69□□□□□ -1.02
HDAC3-203ENST00000467533 RYKP34925 604 aa8.69□□□□□ -1.02
HDAC3-203ENST00000467533 CRYBB2P43320 205 aa8.69□□□□□ -1.02
HDAC3-203ENST00000467533 ARF1P84077 181 aaKnown RBP8.69□□□□□ -1.02
HDAC3-203ENST00000467533 GPR68Q15743 365 aa8.69□□□□□ -1.02
HDAC3-203ENST00000467533 HFEQ30201 348 aa8.69□□□□□ -1.02
HDAC3-203ENST00000467533 PCGF3Q3KNV8 242 aa8.69□□□□□ -1.02
HDAC3-203ENST00000467533 USP51Q70EK9 711 aa8.69□□□□□ -1.02
HDAC3-203ENST00000467533 TMEM99Q8N816 258 aa8.69□□□□□ -1.02
HDAC3-203ENST00000467533 KIF18AQ8NI77 898 aa8.69□□□□□ -1.02
HDAC3-203ENST00000467533 MGARPQ8TDB4 240 aa8.69□□□□□ -1.02
HDAC3-203ENST00000467533 SNX33Q8WV41 574 aa8.69□□□□□ -1.02
HDAC3-203ENST00000467533 PPCDCQ96CD2 204 aa8.69□□□□□ -1.02
HDAC3-203ENST00000467533 MS4A3Q96HJ5 214 aa8.69□□□□□ -1.02
HDAC3-203ENST00000467533 EGLN2Q96KS0 407 aa8.69□□□□□ -1.02
HDAC3-203ENST00000467533 KCNA7Q96RP8 456 aa8.69□□□□□ -1.02
HDAC3-203ENST00000467533 SF3B5Q9BWJ5 86 aaKnown RBP8.69□□□□□ -1.02
HDAC3-203ENST00000467533 ACTRT3Q9BYD9 372 aa8.69□□□□□ -1.02
HDAC3-203ENST00000467533 MARCH7Q9H992 704 aa8.69□□□□□ -1.02
HDAC3-203ENST00000467533 SH3BP4Q9P0V3 963 aa8.69□□□□□ -1.02
HDAC3-203ENST00000467533 PCDHGB4Q9UN71 923 aa8.69□□□□□ -1.02
HDAC3-203ENST00000467533 FAF1Q9UNN5 650 aaPredicted RBP8.69□□□□□ -1.02
HDAC3-203ENST00000467533 KCNE3Q9Y6H6 103 aa8.69□□□□□ -1.02
HDAC3-203ENST00000467533 PLXNB1O43157 2135 aa8.68□□□□□ -1.02
HDAC3-203ENST00000467533 TRAV40A0A0B4J280 105 aa8.68□□□□□ -1.02
HDAC3-203ENST00000467533 CENPVL1A0A0U1RR11 272 aa8.68□□□□□ -1.02
HDAC3-203ENST00000467533 SRRM5B3KS81 715 aa8.68□□□□□ -1.02
HDAC3-203ENST00000467533 EIF3HO15372 352 aaKnown RBP eCLIP8.68□□□□□ -1.02
HDAC3-203ENST00000467533 CLPXO76031 633 aa8.68□□□□□ -1.02
HDAC3-203ENST00000467533 ZNF432O94892 652 aa8.68□□□□□ -1.02
HDAC3-203ENST00000467533 AKR7A3O95154 331 aa8.68□□□□□ -1.02
HDAC3-203ENST00000467533 IGHMP01871 453 aa8.68□□□□□ -1.02
HDAC3-203ENST00000467533 KRT16P08779 473 aa8.68□□□□□ -1.02
HDAC3-203ENST00000467533 ZNF12P17014 697 aa8.68□□□□□ -1.02
HDAC3-203ENST00000467533 TP53BP2Q13625 1128 aa8.68□□□□□ -1.02
HDAC3-203ENST00000467533 NOXRED1Q6NXP6 359 aa8.68□□□□□ -1.02
HDAC3-203ENST00000467533 C9orf139Q6ZV77 190 aa8.68□□□□□ -1.02
HDAC3-203ENST00000467533 EIF3MQ7L2H7 374 aaKnown RBP8.68□□□□□ -1.02
HDAC3-203ENST00000467533 OR52E2Q8NGJ4 325 aa8.68□□□□□ -1.02
HDAC3-203ENST00000467533 FAM76AQ8TAV0 307 aa8.68□□□□□ -1.02
HDAC3-203ENST00000467533 WWC2-AS2Q96NR7 200 aa8.68□□□□□ -1.02
HDAC3-203ENST00000467533 C1QTNF3Q9BXJ4 246 aa8.68□□□□□ -1.02
HDAC3-203ENST00000467533 NMUR2Q9GZQ4 415 aa8.68□□□□□ -1.02
HDAC3-203ENST00000467533 HINT3Q9NQE9 182 aaKnown RBP8.68□□□□□ -1.02
HDAC3-203ENST00000467533 DECR2Q9NUI1 292 aa8.68□□□□□ -1.02
HDAC3-203ENST00000467533 AURKAIP1Q9NWT8 199 aaPredicted RBP8.68□□□□□ -1.02
HDAC3-203ENST00000467533 TAAR3PQ9P1P4 343 aa8.68□□□□□ -1.02
HDAC3-203ENST00000467533 GPR160Q9UJ42 338 aa8.68□□□□□ -1.02
HDAC3-203ENST00000467533 SNX24Q9Y343 169 aa8.68□□□□□ -1.02
HDAC3-203ENST00000467533 INSIG2Q9Y5U4 225 aa8.68□□□□□ -1.02
HDAC3-203ENST00000467533 CACNG2Q9Y698 323 aa8.68□□□□□ -1.02
HDAC3-203ENST00000467533 TANC2Q9HCD6 1990 aa8.68□□□□□ -1.02
HDAC3-203ENST00000467533 TMED7-TICAM2A0A0A6YYA0 188 aa8.67□□□□□ -1.02
HDAC3-203ENST00000467533 TMEM72A0PK05 275 aa8.67□□□□□ -1.02
HDAC3-203ENST00000467533 HMX2A2RU54 273 aa8.67□□□□□ -1.02
HDAC3-203ENST00000467533 AGAP5A6NIR3 686 aa8.67□□□□□ -1.02
HDAC3-203ENST00000467533 AQP7P3A6NL99 342 aa8.67□□□□□ -1.02
HDAC3-203ENST00000467533 FRS3O43559 492 aa8.67□□□□□ -1.02
HDAC3-203ENST00000467533 AKAP10O43572 662 aa8.67□□□□□ -1.02
HDAC3-203ENST00000467533 URI1O94763 535 aaPredicted RBP8.67□□□□□ -1.02
HDAC3-203ENST00000467533 ENO1P06733 434 aaKnown RBP8.67□□□□□ -1.02
HDAC3-203ENST00000467533 CD79AP11912 226 aa8.67□□□□□ -1.02
HDAC3-203ENST00000467533 FRKP42685 505 aaPredicted RBP8.67□□□□□ -1.02
HDAC3-203ENST00000467533 GUCY2DQ02846 1103 aa8.67□□□□□ -1.02
HDAC3-203ENST00000467533 CEACAM7Q14002 265 aa8.67□□□□□ -1.02
HDAC3-203ENST00000467533 OR7A5Q15622 319 aa8.67□□□□□ -1.02
HDAC3-203ENST00000467533 FXNQ16595 210 aa8.67□□□□□ -1.02
HDAC3-203ENST00000467533 DEFB112Q30KQ8 113 aa8.67□□□□□ -1.02
HDAC3-203ENST00000467533 SPDYE7PQ495Y7 208 aa8.67□□□□□ -1.02
HDAC3-203ENST00000467533 TMEM225Q6GV28 225 aa8.67□□□□□ -1.02
HDAC3-203ENST00000467533 DCAKDQ8WVC6 231 aa8.67□□□□□ -1.02
HDAC3-203ENST00000467533 PMM1Q92871 262 aa8.67□□□□□ -1.02
HDAC3-203ENST00000467533 PPP1R14AQ96A00 147 aa8.67□□□□□ -1.02
HDAC3-203ENST00000467533 ZNF764Q96H86 408 aaPredicted RBP8.67□□□□□ -1.02
HDAC3-203ENST00000467533 LINC00470Q9BZP3 86 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms