RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 DUSP13Q9UII6 198 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 CCL26Q9Y258 94 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 SSUH2Q9Y2M2 353 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 E9PI62 339 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 H0YGG7 62 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 RGS11O94810 467 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 CXCL10P02778 98 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 F2RP25116 425 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 CD68P34810 354 aaPredicted RBP8.1□□□□□ -1.11
HPS4-209ENST00000466781 MTCP1P56278 107 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 TAS2R19P59542 299 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 LTBQ06643 244 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 HACD4Q5VWC8 232 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 CD163Q86VB7 1156 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 CMIPQ8IY22 773 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 OR5K2Q8NHB8 316 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 BRIX1Q8TDN6 353 aaKnown RBP8.1□□□□□ -1.11
HPS4-209ENST00000466781 TCTEX1D2Q8WW35 142 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 ZNF775Q96BV0 537 aaPredicted RBP8.1□□□□□ -1.11
HPS4-209ENST00000466781 PTERQ96BW5 349 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 CTRCQ99895 268 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 GINS3Q9BRX5 216 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 OR52D1Q9H346 318 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 MSTNO14793 375 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 ARPC1BO15143 372 aaKnown RBP8.1□□□□□ -1.11
HPS4-209ENST00000466781 CNIH1O95406 144 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 BCKDHBP21953 392 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 HIST1H1TP22492 207 aaPredicted RBP8.1□□□□□ -1.11
HPS4-209ENST00000466781 MYF6P23409 242 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 HOXD9P28356 352 aaPredicted RBP8.1□□□□□ -1.11
HPS4-209ENST00000466781 EDDM3BP56851 147 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 GNB2P62879 340 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 ANKRD13BQ86YJ7 626 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 SERPINA12Q8IW75 414 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 SLC35F3Q8IY50 421 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 SIMC1Q8NDZ2 872 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 OR4M1Q8NGD0 313 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 NT5C3BQ969T7 300 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 E7ESA3 106 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 LINC01565O15544 149 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 P2RX6O15547 441 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 ABLIM3O94929 683 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 PENKP01210 267 aaPredicted RBP8.1□□□□□ -1.11
HPS4-209ENST00000466781 F11P03951 625 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 GYPBP06028 91 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 CDK1P06493 297 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 RETP07949 1114 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 C1SP09871 688 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 LIPCP11150 499 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 CHRNB1P11230 501 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 MMP12P39900 470 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 HTR2BP41595 481 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 RAC1P63000 192 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 MFGE8Q08431 387 aaPredicted RBP8.1□□□□□ -1.11
HPS4-209ENST00000466781 MYBPHQ13203 477 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 TNK1Q13470 666 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 OR7E24Q6IFN5 339 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 CYP4V2Q6ZWL3 525 aaPredicted RBP8.1□□□□□ -1.11
HPS4-209ENST00000466781 OR2T27Q8NH04 317 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 TMEM163Q8TC26 289 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 ZNF778Q96MU6 729 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 SMIM14Q96QK8 99 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 LIN7BQ9HAP6 207 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 ADAMTS6Q9UKP5 1117 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 WASH4PA8MWX3 477 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 TGM6O95932 706 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 SLC1A3P43003 542 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 RAB40BQ12829 278 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 EXT1Q16394 746 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 GTDC1Q4AE62 458 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 CTSL3PQ5NE16 218 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 CCBE1Q6UXH8 406 aaPredicted RBP8.1□□□□□ -1.11
HPS4-209ENST00000466781 ZNF75AQ96N20 296 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 HES7Q9BYE0 225 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 SLC6A17Q9H1V8 727 aa8.1□□□□□ -1.11
HPS4-209ENST00000466781 CXXC1Q9P0U4 656 aaPredicted RBP8.1□□□□□ -1.11
HPS4-209ENST00000466781 LOC285095A0A1B0GVY8 99 aa8.09□□□□□ -1.11
HPS4-209ENST00000466781 TSPAN11A1L157 253 aa8.09□□□□□ -1.11
HPS4-209ENST00000466781 G3V3Y1 287 aa8.09□□□□□ -1.11
HPS4-209ENST00000466781 GAPDHSO14556 408 aaPredicted RBP8.09□□□□□ -1.11
HPS4-209ENST00000466781 AGPAT2O15120 278 aa8.09□□□□□ -1.11
HPS4-209ENST00000466781 OR7C1O76099 320 aaPredicted RBP8.09□□□□□ -1.11
HPS4-209ENST00000466781 ABHD16AO95870 558 aa8.09□□□□□ -1.11
HPS4-209ENST00000466781 ARAFP10398 606 aa8.09□□□□□ -1.11
HPS4-209ENST00000466781 SELEP16581 610 aa8.09□□□□□ -1.11
HPS4-209ENST00000466781 PTGER1P34995 402 aa8.09□□□□□ -1.11
HPS4-209ENST00000466781 VEGFCP49767 419 aa8.09□□□□□ -1.11
HPS4-209ENST00000466781 UBE2G2P60604 165 aa8.09□□□□□ -1.11
HPS4-209ENST00000466781 HOXC5Q00444 222 aa8.09□□□□□ -1.11
HPS4-209ENST00000466781 VEZF1Q14119 521 aa8.09□□□□□ -1.11
HPS4-209ENST00000466781 C6orf15Q6UXA7 325 aaPredicted RBP8.09□□□□□ -1.11
HPS4-209ENST00000466781 CNTN4Q8IWV2 1026 aa8.09□□□□□ -1.11
HPS4-209ENST00000466781 INSM2Q96T92 566 aaPredicted RBP8.09□□□□□ -1.11
HPS4-209ENST00000466781 INTS6Q9UL03 887 aaKnown RBP8.09□□□□□ -1.11
HPS4-209ENST00000466781 PRELID3BQ9Y3B1 194 aa8.09□□□□□ -1.11
HPS4-209ENST00000466781 PLEKHM1Q9Y4G2 1056 aa8.09□□□□□ -1.11
HPS4-209ENST00000466781 PRSS21Q9Y6M0 314 aa8.09□□□□□ -1.11
HPS4-209ENST00000466781 K7EQM0 130 aa8.09□□□□□ -1.11
HPS4-209ENST00000466781 KCNK2O95069 426 aa8.09□□□□□ -1.11
HPS4-209ENST00000466781 CAPNS1P04632 268 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms