RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 FKBP7Q9Y680 259 aa15.36■□□□□ 0.05
COL7A1-206ENST00000466591 ABCA2Q9BZC7 2435 aa15.36■□□□□ 0.05
COL7A1-206ENST00000466591 EVPLLA8MZ36 301 aa15.35■□□□□ 0.05
COL7A1-206ENST00000466591 AKAP8O43823 692 aaKnown RBP15.35■□□□□ 0.05
COL7A1-206ENST00000466591 CRYAAP02489 173 aa15.35■□□□□ 0.05
COL7A1-206ENST00000466591 APOBEC3AP31941 199 aaPredicted RBP15.35■□□□□ 0.05
COL7A1-206ENST00000466591 MVDP53602 400 aa15.35■□□□□ 0.05
COL7A1-206ENST00000466591 SNRPD2P62316 118 aaKnown RBP15.35■□□□□ 0.05
COL7A1-206ENST00000466591 HOXC5Q00444 222 aa15.35■□□□□ 0.05
COL7A1-206ENST00000466591 EPGNQ6UW88 154 aa15.35■□□□□ 0.05
COL7A1-206ENST00000466591 MAVSQ7Z434 540 aa15.35■□□□□ 0.05
COL7A1-206ENST00000466591 LSRQ86X29 649 aaPredicted RBP15.35■□□□□ 0.05
COL7A1-206ENST00000466591 GPR137CQ8N3F9 429 aa15.35■□□□□ 0.05
COL7A1-206ENST00000466591 WDR31Q8NA23 367 aa15.35■□□□□ 0.05
COL7A1-206ENST00000466591 NFKBIDQ8NI38 313 aa15.35■□□□□ 0.05
COL7A1-206ENST00000466591 FAM168AQ92567 244 aa15.35■□□□□ 0.05
COL7A1-206ENST00000466591 GTF2H4Q92759 462 aa15.35■□□□□ 0.05
COL7A1-206ENST00000466591 TLCD1Q96CP7 247 aa15.35■□□□□ 0.05
COL7A1-206ENST00000466591 OBP2BQ9NPH6 170 aa15.35■□□□□ 0.05
COL7A1-206ENST00000466591 CORO2BQ9UQ03 480 aa15.35■□□□□ 0.05
COL7A1-206ENST00000466591 MOKQ9UQ07 419 aa15.35■□□□□ 0.05
COL7A1-206ENST00000466591 PRR14LQ5THK1 2151 aa15.35■□□□□ 0.05
COL7A1-206ENST00000466591 ATP6V1G2-DDX39BF2Z307 99 aa15.34■□□□□ 0.05
COL7A1-206ENST00000466591 CRLF1O75462 422 aa15.34■□□□□ 0.05
COL7A1-206ENST00000466591 TGDSO95455 350 aa15.34■□□□□ 0.05
COL7A1-206ENST00000466591 LGI1O95970 557 aa15.34■□□□□ 0.05
COL7A1-206ENST00000466591 IFNA2P01563 188 aa15.34■□□□□ 0.05
COL7A1-206ENST00000466591 NUDT7P0C024 238 aa15.34■□□□□ 0.05
COL7A1-206ENST00000466591 NQO1P15559 274 aaKnown RBP15.34■□□□□ 0.05
COL7A1-206ENST00000466591 PAX7P23759 505 aa15.34■□□□□ 0.05
COL7A1-206ENST00000466591 CAPZA2P47755 286 aa15.34■□□□□ 0.05
COL7A1-206ENST00000466591 SELENOPP49908 381 aa15.34■□□□□ 0.05
COL7A1-206ENST00000466591 CLDN17P56750 224 aa15.34■□□□□ 0.05
COL7A1-206ENST00000466591 MAPK11Q15759 364 aa15.34■□□□□ 0.05
COL7A1-206ENST00000466591 CARTPTQ16568 116 aa15.34■□□□□ 0.05
COL7A1-206ENST00000466591 B3GLCTQ6Y288 498 aa15.34■□□□□ 0.05
COL7A1-206ENST00000466591 CREB3L2Q70SY1 520 aa15.34■□□□□ 0.05
COL7A1-206ENST00000466591 SLC46A3Q7Z3Q1 461 aa15.34■□□□□ 0.05
COL7A1-206ENST00000466591 PRIMA1Q86XR5 153 aa15.34■□□□□ 0.05
COL7A1-206ENST00000466591 C10orf53Q8N6V4 93 aa15.34■□□□□ 0.05
COL7A1-206ENST00000466591 MFSD8Q8NHS3 518 aa15.34■□□□□ 0.05
COL7A1-206ENST00000466591 SLC38A4Q969I6 547 aa15.34■□□□□ 0.05
COL7A1-206ENST00000466591 C3orf49Q96BT1 292 aa15.34■□□□□ 0.05
COL7A1-206ENST00000466591 SPDL1Q96EA4 605 aa15.34■□□□□ 0.05
COL7A1-206ENST00000466591 AMBRA1Q9C0C7 1298 aa15.34■□□□□ 0.05
COL7A1-206ENST00000466591 PAIP1Q9H074 479 aaKnown RBP15.34■□□□□ 0.05
COL7A1-206ENST00000466591 MOV10Q9HCE1 1003 aaKnown RBP15.34■□□□□ 0.05
COL7A1-206ENST00000466591 IGHV4-30-2A0A087WSY4 118 aa15.33■□□□□ 0.04
COL7A1-206ENST00000466591 A0A096LPE4 126 aa15.33■□□□□ 0.04
COL7A1-206ENST00000466591 A0A1W2PPZ6 126 aa15.33■□□□□ 0.04
COL7A1-206ENST00000466591 PRORSD1PA6NEY8 169 aa15.33■□□□□ 0.04
COL7A1-206ENST00000466591 KIAA1324LA8MWY0 1029 aaPredicted RBP15.33■□□□□ 0.04
COL7A1-206ENST00000466591 VSTM5A8MXK1 200 aa15.33■□□□□ 0.04
COL7A1-206ENST00000466591 PDLIM1O00151 329 aa15.33■□□□□ 0.04
COL7A1-206ENST00000466591 AIM2O14862 343 aa15.33■□□□□ 0.04
COL7A1-206ENST00000466591 CD5LO43866 347 aa15.33■□□□□ 0.04
COL7A1-206ENST00000466591 OR2T1O43869 369 aa15.33■□□□□ 0.04
COL7A1-206ENST00000466591 SLC43A1O75387 559 aa15.33■□□□□ 0.04
COL7A1-206ENST00000466591 CSF3P09919 207 aa15.33■□□□□ 0.04
COL7A1-206ENST00000466591 PNMTP11086 282 aa15.33■□□□□ 0.04
COL7A1-206ENST00000466591 SLC25A16P16260 332 aa15.33■□□□□ 0.04
COL7A1-206ENST00000466591 SLC6A2P23975 617 aa15.33■□□□□ 0.04
COL7A1-206ENST00000466591 SH3BGRP55822 239 aaPredicted RBP15.33■□□□□ 0.04
COL7A1-206ENST00000466591 TBRG1Q3YBR2 411 aa15.33■□□□□ 0.04
COL7A1-206ENST00000466591 ALG10BQ5I7T1 473 aa15.33■□□□□ 0.04
COL7A1-206ENST00000466591 AGBL2Q5U5Z8 902 aa15.33■□□□□ 0.04
COL7A1-206ENST00000466591 VHLLQ6RSH7 139 aa15.33■□□□□ 0.04
COL7A1-206ENST00000466591 C5orf46Q6UWT4 87 aa15.33■□□□□ 0.04
COL7A1-206ENST00000466591 ZNF525Q8N782 197 aa15.33■□□□□ 0.04
COL7A1-206ENST00000466591 OR1K1Q8NGR3 316 aa15.33■□□□□ 0.04
COL7A1-206ENST00000466591 SLC35B4Q969S0 331 aa15.33■□□□□ 0.04
COL7A1-206ENST00000466591 C7orf26Q96N11 449 aa15.33■□□□□ 0.04
COL7A1-206ENST00000466591 ZNF607Q96SK3 696 aa15.33■□□□□ 0.04
COL7A1-206ENST00000466591 VRK1Q99986 396 aaPredicted RBP15.33■□□□□ 0.04
COL7A1-206ENST00000466591 TMEM27Q9HBJ8 222 aa15.33■□□□□ 0.04
COL7A1-206ENST00000466591 BCL2L10Q9HD36 194 aa15.33■□□□□ 0.04
COL7A1-206ENST00000466591 A8MV72 311 aaPredicted RBP15.32■□□□□ 0.04
COL7A1-206ENST00000466591 SERPINB7O75635 380 aa15.32■□□□□ 0.04
COL7A1-206ENST00000466591 ETS2P15036 469 aa15.32■□□□□ 0.04
COL7A1-206ENST00000466591 CBLP22681 906 aa15.32■□□□□ 0.04
COL7A1-206ENST00000466591 PRKAR1BP31321 381 aa15.32■□□□□ 0.04
COL7A1-206ENST00000466591 AQP5P55064 265 aa15.32■□□□□ 0.04
COL7A1-206ENST00000466591 RGS8P57771 180 aaPredicted RBP15.32■□□□□ 0.04
COL7A1-206ENST00000466591 SLC25A3Q00325 362 aa15.32■□□□□ 0.04
COL7A1-206ENST00000466591 CDK6Q00534 326 aa15.32■□□□□ 0.04
COL7A1-206ENST00000466591 ROR2Q01974 943 aaKnown RBP15.32■□□□□ 0.04
COL7A1-206ENST00000466591 AGKQ53H12 422 aa15.32■□□□□ 0.04
COL7A1-206ENST00000466591 BEND6Q5SZJ8 279 aaPredicted RBP15.32■□□□□ 0.04
COL7A1-206ENST00000466591 REEP3Q6NUK4 255 aa15.32■□□□□ 0.04
COL7A1-206ENST00000466591 KDM8Q8N371 416 aa15.32■□□□□ 0.04
COL7A1-206ENST00000466591 ZIC4Q8N9L1 334 aa15.32■□□□□ 0.04
COL7A1-206ENST00000466591 DNAJA4Q8WW22 397 aaPredicted RBP15.32■□□□□ 0.04
COL7A1-206ENST00000466591 SLC38A2Q96QD8 506 aa15.32■□□□□ 0.04
COL7A1-206ENST00000466591 EPYCQ99645 322 aa15.32■□□□□ 0.04
COL7A1-206ENST00000466591 NSD1Q96L73 2696 aaPredicted RBP15.32■□□□□ 0.04
COL7A1-206ENST00000466591 FN1P02751 2386 aaKnown RBP15.31■□□□□ 0.04
COL7A1-206ENST00000466591 H7C417 338 aa15.31■□□□□ 0.04
COL7A1-206ENST00000466591 ERCC1P07992 297 aaPredicted RBP15.31■□□□□ 0.04
COL7A1-206ENST00000466591 VIMP08670 466 aaKnown RBP15.31■□□□□ 0.04
COL7A1-206ENST00000466591 AQP1P29972 269 aa15.31■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms