RNA–Protein interactions for RNA: ENST00000466192.5

COL9A3-205, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 2,194 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-205ENST00000466192 SMPDL3BQ92485 455 aa16.6■□□□□ 0.25
COL9A3-205ENST00000466192 LOXL4Q96JB6 756 aa16.6■□□□□ 0.25
COL9A3-205ENST00000466192 BABAM2Q9NXR7 383 aa16.6■□□□□ 0.25
COL9A3-205ENST00000466192 GPN3Q9UHW5 284 aaPredicted RBP16.6■□□□□ 0.25
COL9A3-205ENST00000466192 PCDHGA5Q9Y5G8 931 aa16.6■□□□□ 0.25
COL9A3-205ENST00000466192 CDC40O60508 579 aaKnown RBP eCLIP16.59■□□□□ 0.25
COL9A3-205ENST00000466192 CYC1P08574 325 aa16.59■□□□□ 0.25
COL9A3-205ENST00000466192 ASAH2BP0C7U1 165 aa16.59■□□□□ 0.25
COL9A3-205ENST00000466192 FGF9P31371 208 aaPredicted RBP16.59■□□□□ 0.25
COL9A3-205ENST00000466192 TNFSF8P32971 234 aa16.59■□□□□ 0.25
COL9A3-205ENST00000466192 AQP2P41181 271 aa16.59■□□□□ 0.25
COL9A3-205ENST00000466192 PRPS1P60891 318 aa16.59■□□□□ 0.25
COL9A3-205ENST00000466192 FAM83FQ8NEG4 500 aaPredicted RBP16.59■□□□□ 0.25
COL9A3-205ENST00000466192 GPR119Q8TDV5 335 aa16.59■□□□□ 0.25
COL9A3-205ENST00000466192 TAAR8Q969N4 342 aa16.59■□□□□ 0.25
COL9A3-205ENST00000466192 ZMYND19Q96E35 227 aaPredicted RBP16.59■□□□□ 0.25
COL9A3-205ENST00000466192 LRFN5Q96NI6 719 aa16.59■□□□□ 0.25
COL9A3-205ENST00000466192 SLC39A1Q9NY26 324 aa16.59■□□□□ 0.25
COL9A3-205ENST00000466192 NXT1Q9UKK6 140 aaKnown RBP16.59■□□□□ 0.25
COL9A3-205ENST00000466192 HIF3AQ9Y2N7 669 aa16.59■□□□□ 0.25
COL9A3-205ENST00000466192 R4GN57 208 aa16.59■□□□□ 0.25
COL9A3-205ENST00000466192 TRDV1A0A1B0GX56 115 aa16.58■□□□□ 0.25
COL9A3-205ENST00000466192 IMPA2O14732 288 aa16.58■□□□□ 0.25
COL9A3-205ENST00000466192 SERPINI2O75830 405 aa16.58■□□□□ 0.25
COL9A3-205ENST00000466192 GP1BBP13224 206 aa16.58■□□□□ 0.25
COL9A3-205ENST00000466192 CXCR1P25024 350 aa16.58■□□□□ 0.25
COL9A3-205ENST00000466192 ERVK-25P63136 954 aa16.58■□□□□ 0.25
COL9A3-205ENST00000466192 QPRTQ15274 297 aa16.58■□□□□ 0.25
COL9A3-205ENST00000466192 LYSMD2Q8IV50 215 aa16.58■□□□□ 0.25
COL9A3-205ENST00000466192 ARIH2OSQ8N7S6 290 aa16.58■□□□□ 0.25
COL9A3-205ENST00000466192 OR5L2Q8NGL0 311 aa16.58■□□□□ 0.25
COL9A3-205ENST00000466192 HGDQ93099 445 aa16.58■□□□□ 0.25
COL9A3-205ENST00000466192 RASD2Q96D21 266 aa16.58■□□□□ 0.25
COL9A3-205ENST00000466192 GPX7Q96SL4 187 aaPredicted RBP16.58■□□□□ 0.25
COL9A3-205ENST00000466192 NMNAT3Q96T66 252 aa16.58■□□□□ 0.25
COL9A3-205ENST00000466192 SLC30A2Q9BRI3 323 aa16.58■□□□□ 0.25
COL9A3-205ENST00000466192 KATNB1Q9BVA0 655 aa16.58■□□□□ 0.25
COL9A3-205ENST00000466192 KLHL21Q9UJP4 597 aa16.58■□□□□ 0.25
COL9A3-205ENST00000466192 SIRT4Q9Y6E7 314 aaPredicted RBP16.58■□□□□ 0.25
COL9A3-205ENST00000466192 EML6Q6ZMW3 1958 aa16.58■□□□□ 0.25
COL9A3-205ENST00000466192 KMT2EQ8IZD2 1858 aa16.58■□□□□ 0.25
COL9A3-205ENST00000466192 C2orf72A6NCS6 295 aa16.58■□□□□ 0.24
COL9A3-205ENST00000466192 B4DXG7 233 aa16.58■□□□□ 0.24
COL9A3-205ENST00000466192 ARPC3O15145 178 aa16.58■□□□□ 0.24
COL9A3-205ENST00000466192 ZFAND5O76080 213 aa16.58■□□□□ 0.24
COL9A3-205ENST00000466192 HLA-DPB1P04440 258 aa16.58■□□□□ 0.24
COL9A3-205ENST00000466192 UMODP07911 640 aa16.58■□□□□ 0.24
COL9A3-205ENST00000466192 ETV6P41212 452 aa16.58■□□□□ 0.24
COL9A3-205ENST00000466192 RPS5P46782 204 aaKnown RBP16.58■□□□□ 0.24
COL9A3-205ENST00000466192 STEAP3Q658P3 488 aa16.58■□□□□ 0.24
COL9A3-205ENST00000466192 OR5M10Q6IEU7 315 aa16.58■□□□□ 0.24
COL9A3-205ENST00000466192 ZNF517Q6ZMY9 492 aaPredicted RBP16.58■□□□□ 0.24
COL9A3-205ENST00000466192 PLEKHG7Q6ZR37 379 aa16.58■□□□□ 0.24
COL9A3-205ENST00000466192 LAX1Q8IWV1 398 aa16.58■□□□□ 0.24
COL9A3-205ENST00000466192 LRRC75AQ8NAA5 344 aa16.58■□□□□ 0.24
COL9A3-205ENST00000466192 INPP5EQ9NRR6 644 aa16.58■□□□□ 0.24
COL9A3-205ENST00000466192 HAO2Q9NYQ3 351 aa16.58■□□□□ 0.24
COL9A3-205ENST00000466192 MYOTQ9UBF9 498 aa16.58■□□□□ 0.24
COL9A3-205ENST00000466192 PCDHGB6Q9Y5F9 930 aa16.58■□□□□ 0.24
COL9A3-205ENST00000466192 A0A1W2PQL4 384 aaPredicted RBP16.57■□□□□ 0.24
COL9A3-205ENST00000466192 CD8B2A6NJW9 211 aa16.57■□□□□ 0.24
COL9A3-205ENST00000466192 GABRPO00591 440 aa16.57■□□□□ 0.24
COL9A3-205ENST00000466192 KLF7O75840 302 aaPredicted RBP16.57■□□□□ 0.24
COL9A3-205ENST00000466192 CD8BP10966 210 aa16.57■□□□□ 0.24
COL9A3-205ENST00000466192 TGM1P22735 817 aa16.57■□□□□ 0.24
COL9A3-205ENST00000466192 CCKBRP32239 447 aa16.57■□□□□ 0.24
COL9A3-205ENST00000466192 HCCSP53701 268 aa16.57■□□□□ 0.24
COL9A3-205ENST00000466192 CAV3P56539 151 aa16.57■□□□□ 0.24
COL9A3-205ENST00000466192 PCOLCEQ15113 449 aa16.57■□□□□ 0.24
COL9A3-205ENST00000466192 ZNF181Q2M3W8 571 aa16.57■□□□□ 0.24
COL9A3-205ENST00000466192 COL28A1Q2UY09 1125 aa16.57■□□□□ 0.24
COL9A3-205ENST00000466192 C1QL3Q5VWW1 255 aa16.57■□□□□ 0.24
COL9A3-205ENST00000466192 SLC22A16Q86VW1 577 aa16.57■□□□□ 0.24
COL9A3-205ENST00000466192 DNAJA3Q96EY1 480 aa16.57■□□□□ 0.24
COL9A3-205ENST00000466192 DDOQ99489 341 aa16.57■□□□□ 0.24
COL9A3-205ENST00000466192 TTTY10Q9BZA0 68 aa16.57■□□□□ 0.24
COL9A3-205ENST00000466192 PLEKHB1Q9UF11 243 aaPredicted RBP16.57■□□□□ 0.24
COL9A3-205ENST00000466192 PTRH2Q9Y3E5 179 aaKnown RBP16.57■□□□□ 0.24
COL9A3-205ENST00000466192 LOC102723996A0A087X1L8 192 aa16.57■□□□□ 0.24
COL9A3-205ENST00000466192 CASKO14936 926 aa16.57■□□□□ 0.24
COL9A3-205ENST00000466192 UQCRC1P31930 480 aa16.57■□□□□ 0.24
COL9A3-205ENST00000466192 BDH1Q02338 343 aa16.57■□□□□ 0.24
COL9A3-205ENST00000466192 ZNF85Q03923 595 aa16.57■□□□□ 0.24
COL9A3-205ENST00000466192 NUP54Q7Z3B4 507 aa16.57■□□□□ 0.24
COL9A3-205ENST00000466192 MARCH9Q86YJ5 346 aa16.57■□□□□ 0.24
COL9A3-205ENST00000466192 RFLNBQ8N5W9 214 aa16.57■□□□□ 0.24
COL9A3-205ENST00000466192 GALNT6Q8NCL4 622 aa16.57■□□□□ 0.24
COL9A3-205ENST00000466192 NPEPL1Q8NDH3 523 aa16.57■□□□□ 0.24
COL9A3-205ENST00000466192 ZPLD1Q8TCW7 415 aa16.57■□□□□ 0.24
COL9A3-205ENST00000466192 TMCO6Q96DC7 493 aa16.57■□□□□ 0.24
COL9A3-205ENST00000466192 C4orf36Q96KX1 117 aa16.57■□□□□ 0.24
COL9A3-205ENST00000466192 MED18Q9BUE0 208 aa16.57■□□□□ 0.24
COL9A3-205ENST00000466192 GALNT9Q9HCQ5 603 aa16.57■□□□□ 0.24
COL9A3-205ENST00000466192 TRIM36Q9NQ86 728 aa16.57■□□□□ 0.24
COL9A3-205ENST00000466192 ASB6Q9NWX5 421 aa16.57■□□□□ 0.24
COL9A3-205ENST00000466192 B3GALT1Q9Y5Z6 326 aa16.57■□□□□ 0.24
COL9A3-205ENST00000466192 ALPK2Q86TB3 2170 aa16.56■□□□□ 0.24
COL9A3-205ENST00000466192 IQCMA0A1B0GVH7 501 aa16.56■□□□□ 0.24
COL9A3-205ENST00000466192 OR6C68A6NDL8 312 aa16.56■□□□□ 0.24
COL9A3-205ENST00000466192 E9PI62 339 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms