RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 EXTL2Q9UBQ6 330 aa1.39□□□□□ -2.19
CCDC93-205ENST00000466171 SEC14L3Q9UDX4 400 aa1.39□□□□□ -2.19
CCDC93-205ENST00000466171 DCDC2Q9UHG0 476 aa1.39□□□□□ -2.19
CCDC93-205ENST00000466171 NAP1L2Q9ULW6 460 aaPredicted RBP1.39□□□□□ -2.19
CCDC93-205ENST00000466171 TMCO1Q9UM00 188 aa1.39□□□□□ -2.19
CCDC93-205ENST00000466171 HPCAL4Q9UM19 191 aa1.39□□□□□ -2.19
CCDC93-205ENST00000466171 RABL2BQ9UNT1 228 aa1.39□□□□□ -2.19
CCDC93-205ENST00000466171 PIGLQ9Y2B2 252 aa1.39□□□□□ -2.19
CCDC93-205ENST00000466171 THSD7BQ9C0I4 1608 aa1.39□□□□□ -2.19
CCDC93-205ENST00000466171 SH3TC1Q8TE82 1336 aa1.39□□□□□ -2.19
CCDC93-205ENST00000466171 ATP10AO60312 1499 aa1.38□□□□□ -2.19
CCDC93-205ENST00000466171 RBMY1BA6NDE4 496 aaKnown RBP1.38□□□□□ -2.19
CCDC93-205ENST00000466171 RBMY1EA6NEQ0 496 aaKnown RBP1.38□□□□□ -2.19
CCDC93-205ENST00000466171 SNTNA6NMZ2 147 aa1.38□□□□□ -2.19
CCDC93-205ENST00000466171 USP27XA6NNY8 438 aa1.38□□□□□ -2.19
CCDC93-205ENST00000466171 GFYI3L273 518 aa1.38□□□□□ -2.19
CCDC93-205ENST00000466171 HSD17B6O14756 317 aa1.38□□□□□ -2.19
CCDC93-205ENST00000466171 NBR2O15453 112 aa1.38□□□□□ -2.19
CCDC93-205ENST00000466171 FCMRO60667 390 aa1.38□□□□□ -2.19
CCDC93-205ENST00000466171 RAMP3O60896 148 aa1.38□□□□□ -2.19
CCDC93-205ENST00000466171 ZNF780AO75290 641 aaPredicted RBP1.38□□□□□ -2.19
CCDC93-205ENST00000466171 BBOX1O75936 387 aa1.38□□□□□ -2.19
CCDC93-205ENST00000466171 KLF8O95600 359 aaPredicted RBP1.38□□□□□ -2.19
CCDC93-205ENST00000466171 SERPINA3P01011 423 aa1.38□□□□□ -2.19
CCDC93-205ENST00000466171 HPNP05981 417 aa1.38□□□□□ -2.19
CCDC93-205ENST00000466171 RBMY1DP0C7P1 496 aaKnown RBP1.38□□□□□ -2.19
CCDC93-205ENST00000466171 RBMY1A1P0DJD3 496 aaKnown RBP1.38□□□□□ -2.19
CCDC93-205ENST00000466171 NCF2P19878 526 aaPredicted RBP1.38□□□□□ -2.19
CCDC93-205ENST00000466171 NPR2P20594 1047 aa1.38□□□□□ -2.19
CCDC93-205ENST00000466171 SLC2A5P22732 501 aa1.38□□□□□ -2.19
CCDC93-205ENST00000466171 RFC4P35249 363 aa1.38□□□□□ -2.19
CCDC93-205ENST00000466171 PTGDSP41222 190 aa1.38□□□□□ -2.19
CCDC93-205ENST00000466171 VDAC2P45880 294 aaPredicted RBP1.38□□□□□ -2.19
CCDC93-205ENST00000466171 DUSP3P51452 185 aaPredicted RBP1.38□□□□□ -2.19
CCDC93-205ENST00000466171 CDK16Q00536 496 aa1.38□□□□□ -2.19
CCDC93-205ENST00000466171 OGDHQ02218 1023 aa1.38□□□□□ -2.19
CCDC93-205ENST00000466171 PDIA2Q13087 525 aaKnown RBP1.38□□□□□ -2.19
CCDC93-205ENST00000466171 OR5I1Q13606 314 aa1.38□□□□□ -2.19
CCDC93-205ENST00000466171 NSDHLQ15738 373 aa1.38□□□□□ -2.19
CCDC93-205ENST00000466171 MICBQ29980 383 aa1.38□□□□□ -2.19
CCDC93-205ENST00000466171 ZNF630Q2M218 657 aaPredicted RBP1.38□□□□□ -2.19
CCDC93-205ENST00000466171 RABL6Q3YEC7 729 aaPredicted RBP1.38□□□□□ -2.19
CCDC93-205ENST00000466171 PARP15Q460N3 678 aa1.38□□□□□ -2.19
CCDC93-205ENST00000466171 CARD16Q5EG05 197 aa1.38□□□□□ -2.19
CCDC93-205ENST00000466171 PHYHD1Q5SRE7 291 aa1.38□□□□□ -2.19
CCDC93-205ENST00000466171 C1orf220Q5T0J3 134 aa1.38□□□□□ -2.19
CCDC93-205ENST00000466171 OR2G6Q5TZ20 316 aa1.38□□□□□ -2.19
CCDC93-205ENST00000466171 Q6P435 159 aa1.38□□□□□ -2.19
CCDC93-205ENST00000466171 GDPD3Q7L5L3 318 aa1.38□□□□□ -2.19
CCDC93-205ENST00000466171 MFSD6LQ8IWD5 586 aa1.38□□□□□ -2.19
CCDC93-205ENST00000466171 H1FOOQ8IZA3 346 aaPredicted RBP1.38□□□□□ -2.19
CCDC93-205ENST00000466171 UBE2J2Q8N2K1 259 aa1.38□□□□□ -2.19
CCDC93-205ENST00000466171 C6orf223Q8N319 242 aa1.38□□□□□ -2.19
CCDC93-205ENST00000466171 DCAF4L2Q8NA75 395 aa1.38□□□□□ -2.19
CCDC93-205ENST00000466171 SDR9C7Q8NEX9 313 aa1.38□□□□□ -2.19
CCDC93-205ENST00000466171 BRSK1Q8TDC3 778 aa1.38□□□□□ -2.19
CCDC93-205ENST00000466171 C7orf33Q8WU49 177 aa1.38□□□□□ -2.19
CCDC93-205ENST00000466171 DNAJA4Q8WW22 397 aaPredicted RBP1.38□□□□□ -2.19
CCDC93-205ENST00000466171 N4BP2L2Q92802 583 aaPredicted RBP1.38□□□□□ -2.19
CCDC93-205ENST00000466171 FRAT1Q92837 279 aaPredicted RBP1.38□□□□□ -2.19
CCDC93-205ENST00000466171 UFD1Q92890 307 aa1.38□□□□□ -2.19
CCDC93-205ENST00000466171 FBXO32Q969P5 355 aa1.38□□□□□ -2.19
CCDC93-205ENST00000466171 TBRG4Q969Z0 631 aaKnown RBP eCLIP1.38□□□□□ -2.19
CCDC93-205ENST00000466171 ZNF641Q96N77 438 aaPredicted RBP1.38□□□□□ -2.19
CCDC93-205ENST00000466171 OXGR1Q96P68 337 aa1.38□□□□□ -2.19
CCDC93-205ENST00000466171 MTMR9Q96QG7 549 aa1.38□□□□□ -2.19
CCDC93-205ENST00000466171 MYCBPQ99417 103 aaPredicted RBP1.38□□□□□ -2.19
CCDC93-205ENST00000466171 SLC39A3Q9BRY0 314 aa1.38□□□□□ -2.19
CCDC93-205ENST00000466171 TRIM62Q9BVG3 475 aa1.38□□□□□ -2.19
CCDC93-205ENST00000466171 ROPN1BQ9BZX4 212 aaPredicted RBP1.38□□□□□ -2.19
CCDC93-205ENST00000466171 PPA2Q9H2U2 334 aa1.38□□□□□ -2.19
CCDC93-205ENST00000466171 YY1AP1Q9H869 796 aa1.38□□□□□ -2.19
CCDC93-205ENST00000466171 ZDHHC11Q9H8X9 412 aa1.38□□□□□ -2.19
CCDC93-205ENST00000466171 SGK2Q9HBY8 427 aa1.38□□□□□ -2.19
CCDC93-205ENST00000466171 SH2D2AQ9NP31 389 aa1.38□□□□□ -2.19
CCDC93-205ENST00000466171 KCNIP1Q9NZI2 227 aa1.38□□□□□ -2.19
CCDC93-205ENST00000466171 SUN2Q9UH99 717 aa1.38□□□□□ -2.19
CCDC93-205ENST00000466171 KIF25Q9UIL4 384 aa1.38□□□□□ -2.19
CCDC93-205ENST00000466171 KLK12Q9UKR0 248 aa1.38□□□□□ -2.19
CCDC93-205ENST00000466171 MMP17Q9ULZ9 603 aa1.38□□□□□ -2.19
CCDC93-205ENST00000466171 ASF1AQ9Y294 204 aa1.38□□□□□ -2.19
CCDC93-205ENST00000466171 KCNIP3Q9Y2W7 256 aa1.38□□□□□ -2.19
CCDC93-205ENST00000466171 RPL36Q9Y3U8 105 aaKnown RBP1.38□□□□□ -2.19
CCDC93-205ENST00000466171 ASB3Q9Y575 518 aa1.38□□□□□ -2.19
CCDC93-205ENST00000466171 ARID1AO14497 2285 aa1.38□□□□□ -2.19
CCDC93-205ENST00000466171 CHD4Q14839 1912 aa1.38□□□□□ -2.19
CCDC93-205ENST00000466171 FRMPD3Q5JV73 1810 aa1.38□□□□□ -2.19
CCDC93-205ENST00000466171 IGHV3OR16-13A0A075B7E8 117 aa1.37□□□□□ -2.19
CCDC93-205ENST00000466171 IGHV1OR21-1A0A087WYE8 117 aa1.37□□□□□ -2.19
CCDC93-205ENST00000466171 KIR2DL5BA0A0G2JN68 375 aa1.37□□□□□ -2.19
CCDC93-205ENST00000466171 KIR2DL5BA0A0G2JPC4 375 aa1.37□□□□□ -2.19
CCDC93-205ENST00000466171 A8MUA0 341 aa1.37□□□□□ -2.19
CCDC93-205ENST00000466171 HAS3O00219 553 aa1.37□□□□□ -2.19
CCDC93-205ENST00000466171 CXCL11O14625 94 aa1.37□□□□□ -2.19
CCDC93-205ENST00000466171 PRKAB2O43741 272 aa1.37□□□□□ -2.19
CCDC93-205ENST00000466171 TNFSF13O75888 250 aa1.37□□□□□ -2.19
CCDC93-205ENST00000466171 SNX4O95219 450 aa1.37□□□□□ -2.19
CCDC93-205ENST00000466171 CLDN9O95484 217 aa1.37□□□□□ -2.19
CCDC93-205ENST00000466171 TSPAN12O95859 305 aa1.37□□□□□ -2.19
CCDC93-205ENST00000466171 IGLV1-47P01700 117 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms