RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 NTN1O95631 604 aa4.28□□□□□ -1.72
EXOSC3-204ENST00000465860 PEPDP12955 493 aa4.28□□□□□ -1.72
EXOSC3-204ENST00000465860 GABRA1P14867 456 aa4.28□□□□□ -1.72
EXOSC3-204ENST00000465860 IDO1P14902 403 aa4.28□□□□□ -1.72
EXOSC3-204ENST00000465860 DDX5P17844 614 aaKnown RBP4.28□□□□□ -1.72
EXOSC3-204ENST00000465860 CHMP24386 653 aa4.28□□□□□ -1.72
EXOSC3-204ENST00000465860 EDNRAP25101 427 aa4.28□□□□□ -1.72
EXOSC3-204ENST00000465860 TIMP3P35625 211 aa4.28□□□□□ -1.72
EXOSC3-204ENST00000465860 CHI3L1P36222 383 aaPredicted RBP4.28□□□□□ -1.72
EXOSC3-204ENST00000465860 SLC6A8P48029 635 aa4.28□□□□□ -1.72
EXOSC3-204ENST00000465860 POLR2JP52435 117 aaKnown RBP4.28□□□□□ -1.72
EXOSC3-204ENST00000465860 CLNS1AP54105 237 aaKnown RBP4.28□□□□□ -1.72
EXOSC3-204ENST00000465860 ATP12AP54707 1039 aa4.28□□□□□ -1.72
EXOSC3-204ENST00000465860 PSMD4P55036 377 aaKnown RBP4.28□□□□□ -1.72
EXOSC3-204ENST00000465860 C17orf67Q0P5P2 114 aa4.28□□□□□ -1.72
EXOSC3-204ENST00000465860 FOXF1Q12946 379 aa4.28□□□□□ -1.72
EXOSC3-204ENST00000465860 SELPLGQ14242 412 aa4.28□□□□□ -1.72
EXOSC3-204ENST00000465860 ODF1Q14990 250 aa4.28□□□□□ -1.72
EXOSC3-204ENST00000465860 ZNF141Q15928 474 aa4.28□□□□□ -1.72
EXOSC3-204ENST00000465860 ANXA8L1Q5VT79 327 aa4.28□□□□□ -1.72
EXOSC3-204ENST00000465860 RAET1LQ5VY80 246 aa4.28□□□□□ -1.72
EXOSC3-204ENST00000465860 AP1ARQ63HQ0 302 aa4.28□□□□□ -1.72
EXOSC3-204ENST00000465860 MEX3BQ6ZN04 569 aaKnown RBP4.28□□□□□ -1.72
EXOSC3-204ENST00000465860 ZNF621Q6ZSS3 439 aa4.28□□□□□ -1.72
EXOSC3-204ENST00000465860 COMTD1Q86VU5 262 aa4.28□□□□□ -1.72
EXOSC3-204ENST00000465860 LACC1Q8IV20 430 aa4.28□□□□□ -1.72
EXOSC3-204ENST00000465860 GTPBP8Q8N3Z3 284 aaPredicted RBP4.28□□□□□ -1.72
EXOSC3-204ENST00000465860 ZNF614Q8N883 585 aa4.28□□□□□ -1.72
EXOSC3-204ENST00000465860 FAM71CQ8NEG0 241 aa4.28□□□□□ -1.72
EXOSC3-204ENST00000465860 B4GALNT2Q8NHY0 566 aa4.28□□□□□ -1.72
EXOSC3-204ENST00000465860 FNDC9Q8TBE3 224 aa4.28□□□□□ -1.72
EXOSC3-204ENST00000465860 LRRC8CQ8TDW0 803 aa4.28□□□□□ -1.72
EXOSC3-204ENST00000465860 ASB5Q8WWX0 329 aa4.28□□□□□ -1.72
EXOSC3-204ENST00000465860 SMPDL3BQ92485 455 aa4.28□□□□□ -1.72
EXOSC3-204ENST00000465860 CNOT9Q92600 299 aaKnown RBP4.28□□□□□ -1.72
EXOSC3-204ENST00000465860 NRGNQ92686 78 aa4.28□□□□□ -1.72
EXOSC3-204ENST00000465860 MAL2Q969L2 176 aa4.28□□□□□ -1.72
EXOSC3-204ENST00000465860 ROPN1LQ96C74 230 aa4.28□□□□□ -1.72
EXOSC3-204ENST00000465860 STARD4Q96DR4 205 aa4.28□□□□□ -1.72
EXOSC3-204ENST00000465860 DNAJA3Q96EY1 480 aa4.28□□□□□ -1.72
EXOSC3-204ENST00000465860 MAGEB18Q96M61 343 aa4.28□□□□□ -1.72
EXOSC3-204ENST00000465860 PANX1Q96RD7 426 aa4.28□□□□□ -1.72
EXOSC3-204ENST00000465860 PINK1Q9BXM7 581 aa4.28□□□□□ -1.72
EXOSC3-204ENST00000465860 SRXN1Q9BYN0 137 aa4.28□□□□□ -1.72
EXOSC3-204ENST00000465860 NMUR2Q9GZQ4 415 aa4.28□□□□□ -1.72
EXOSC3-204ENST00000465860 CALHM2Q9HA72 323 aa4.28□□□□□ -1.72
EXOSC3-204ENST00000465860 KCNJ16Q9NPI9 418 aa4.28□□□□□ -1.72
EXOSC3-204ENST00000465860 ZIM2Q9NZV7 527 aa4.28□□□□□ -1.72
EXOSC3-204ENST00000465860 DTNAQ9Y4J8 743 aa4.28□□□□□ -1.72
EXOSC3-204ENST00000465860 ROS1P08922 2347 aa4.28□□□□□ -1.72
EXOSC3-204ENST00000465860 ITPR3Q14573 2671 aa4.28□□□□□ -1.73
EXOSC3-204ENST00000465860 UQCRHLA0A096LP55 91 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 IGHV3-15A0A0B4J1V0 119 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 A0A1W2PNV4 684 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 A0A1W2PPR1 153 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 FAM234BA2RU67 622 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 SERINC4A6NH21 518 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 LINC01548A6NM66 108 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 SLCO1B7G3V0H7 640 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 NR5A2O00482 541 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 AP3D1O14617 1153 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 TNFSF11O14788 317 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 POLR3GO15318 223 aaPredicted RBP4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 HNRNPRO43390 633 aaKnown RBP4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 TRIAP1O43715 76 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 CXCL13O43927 109 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 RCBTB2O95199 551 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 TGDSO95455 350 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 CGAP01215 116 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 IL6P05231 212 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 HOXD4P09016 255 aaPredicted RBP4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 TFPTP0C1Z6 253 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 UBTFL6P0CB48 400 aaPredicted RBP4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 GKN3PP0CG01 181 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 PRG2P13727 222 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 COX6B1P14854 86 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 ATP6V1C1P21283 382 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 DRD4P21917 467 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 RPS4Y1P22090 263 aaKnown RBP4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 PCSK6P29122 969 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 CCKARP32238 428 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 SFTPDP35247 375 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 PGM1P36871 562 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 MRPL19P49406 292 aaKnown RBP4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 P2RX1P51575 399 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 PSPHP78330 225 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 RCAN2Q14206 197 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 FGFBP1Q14512 234 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 HABP2Q14520 560 aaPredicted RBP4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 GANABQ14697 944 aaKnown RBP4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 PON3Q15166 354 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 GUSBP1Q15486 140 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 SRSF7Q16629 238 aaKnown RBP eCLIP4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 GSTA3Q16772 222 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 AGKQ53H12 422 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 ZNF474Q6S9Z5 364 aaPredicted RBP4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 DLEU7Q6UYE1 221 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 ZNF782Q6ZMW2 699 aaPredicted RBP4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 C16orf62Q7Z3J2 963 aa4.27□□□□□ -1.73
EXOSC3-204ENST00000465860 LUZP2Q86TE4 346 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms