RNA–Protein interactions for RNA: ENST00000465471.5

SKA3-205, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 5

Gene SKA3, Length 930 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-205ENST00000465471 EDNRAP25101 427 aa18.03■□□□□ 0.48
SKA3-205ENST00000465471 GRPRP30550 384 aa18.03■□□□□ 0.48
SKA3-205ENST00000465471 CCKARP32238 428 aa18.03■□□□□ 0.48
SKA3-205ENST00000465471 NTF4P34130 210 aa18.03■□□□□ 0.48
SKA3-205ENST00000465471 CD79BP40259 229 aa18.03■□□□□ 0.48
SKA3-205ENST00000465471 OR3A2P47893 321 aa18.03■□□□□ 0.48
SKA3-205ENST00000465471 BNIP1Q12981 228 aa18.03■□□□□ 0.48
SKA3-205ENST00000465471 POU4F3Q15319 338 aa18.03■□□□□ 0.48
SKA3-205ENST00000465471 IQCCQ4KMZ1 466 aa18.03■□□□□ 0.48
SKA3-205ENST00000465471 TTC33Q6PID6 262 aaPredicted RBP18.03■□□□□ 0.48
SKA3-205ENST00000465471 FKBP9P1Q75LS8 142 aa18.03■□□□□ 0.48
SKA3-205ENST00000465471 SLC25A36Q96CQ1 311 aa18.03■□□□□ 0.48
SKA3-205ENST00000465471 MOGAT1Q96PD6 335 aa18.03■□□□□ 0.48
SKA3-205ENST00000465471 MUC13Q9H3R2 512 aa18.03■□□□□ 0.48
SKA3-205ENST00000465471 MEPEQ9NQ76 525 aaPredicted RBP18.03■□□□□ 0.48
SKA3-205ENST00000465471 MAN2C1Q9NTJ4 1040 aa18.03■□□□□ 0.48
SKA3-205ENST00000465471 SEC14L4Q9UDX3 406 aa18.03■□□□□ 0.48
SKA3-205ENST00000465471 RASD1Q9Y272 281 aa18.03■□□□□ 0.48
SKA3-205ENST00000465471 B3GALT5Q9Y2C3 310 aa18.03■□□□□ 0.48
SKA3-205ENST00000465471 CORINQ9Y5Q5 1042 aa18.03■□□□□ 0.48
SKA3-205ENST00000465471 J3KTA2 159 aa18.02■□□□□ 0.48
SKA3-205ENST00000465471 M0R082 166 aa18.02■□□□□ 0.48
SKA3-205ENST00000465471 HNRNPRO43390 633 aaKnown RBP18.02■□□□□ 0.48
SKA3-205ENST00000465471 PDE5AO76074 875 aa18.02■□□□□ 0.48
SKA3-205ENST00000465471 MT-ATP6P00846 226 aa18.02■□□□□ 0.48
SKA3-205ENST00000465471 ATP6V1B2P21281 511 aa18.02■□□□□ 0.48
SKA3-205ENST00000465471 FUT4P22083 530 aa18.02■□□□□ 0.48
SKA3-205ENST00000465471 ST3GAL3Q11203 375 aa18.02■□□□□ 0.48
SKA3-205ENST00000465471 KIF18BQ86Y91 864 aa18.02■□□□□ 0.48
SKA3-205ENST00000465471 ZIC4Q8N9L1 334 aa18.02■□□□□ 0.48
SKA3-205ENST00000465471 SCAIQ8N9R8 606 aa18.02■□□□□ 0.48
SKA3-205ENST00000465471 OR9K2Q8NGE7 335 aa18.02■□□□□ 0.48
SKA3-205ENST00000465471 ZNF417Q8TAU3 575 aa18.02■□□□□ 0.48
SKA3-205ENST00000465471 TMEM255BQ8WV15 326 aa18.02■□□□□ 0.48
SKA3-205ENST00000465471 TMEM45BQ96B21 275 aa18.02■□□□□ 0.48
SKA3-205ENST00000465471 ZNF775Q96BV0 537 aaPredicted RBP18.02■□□□□ 0.48
SKA3-205ENST00000465471 ZNF587Q96SQ5 575 aaPredicted RBP18.02■□□□□ 0.48
SKA3-205ENST00000465471 B3GAT1Q9P2W7 334 aa18.02■□□□□ 0.48
SKA3-205ENST00000465471 ENPP4Q9Y6X5 453 aa18.02■□□□□ 0.48
SKA3-205ENST00000465471 DCHS2Q6V1P9 2916 aa18.01■□□□□ 0.47
SKA3-205ENST00000465471 LOC102725191A0A1B0GVB3 256 aa18.01■□□□□ 0.47
SKA3-205ENST00000465471 GTF2E2P29084 291 aaKnown RBP18.01■□□□□ 0.47
SKA3-205ENST00000465471 UGT2B15P54855 530 aa18.01■□□□□ 0.47
SKA3-205ENST00000465471 VLDLRP98155 873 aa18.01■□□□□ 0.47
SKA3-205ENST00000465471 FAM27E3Q08E93 113 aa18.01■□□□□ 0.47
SKA3-205ENST00000465471 TRIM25Q14258 630 aaKnown RBP18.01■□□□□ 0.47
SKA3-205ENST00000465471 ZNF74Q16587 644 aa18.01■□□□□ 0.47
SKA3-205ENST00000465471 DNAL1Q4LDG9 190 aa18.01■□□□□ 0.47
SKA3-205ENST00000465471 MTX3Q5HYI7 312 aa18.01■□□□□ 0.47
SKA3-205ENST00000465471 LCN8Q6JVE9 175 aa18.01■□□□□ 0.47
SKA3-205ENST00000465471 BEND4Q6ZU67 534 aa18.01■□□□□ 0.47
SKA3-205ENST00000465471 H1FNTQ75WM6 255 aaPredicted RBP18.01■□□□□ 0.47
SKA3-205ENST00000465471 STK32CQ86UX6 486 aa18.01■□□□□ 0.47
SKA3-205ENST00000465471 GABRG1Q8N1C3 465 aa18.01■□□□□ 0.47
SKA3-205ENST00000465471 MARVELD3Q96A59 401 aa18.01■□□□□ 0.47
SKA3-205ENST00000465471 PYURFQ96I23 114 aa18.01■□□□□ 0.47
SKA3-205ENST00000465471 CLPTM1LQ96KA5 538 aa18.01■□□□□ 0.47
SKA3-205ENST00000465471 SLC24A3Q9HC58 644 aa18.01■□□□□ 0.47
SKA3-205ENST00000465471 MRPL39Q9NYK5 338 aaKnown RBP18.01■□□□□ 0.47
SKA3-205ENST00000465471 NDUFAF4Q9P032 175 aa18.01■□□□□ 0.47
SKA3-205ENST00000465471 NOSIPQ9Y314 301 aaKnown RBP18.01■□□□□ 0.47
SKA3-205ENST00000465471 TCRBV5S2A0A599 114 aa18■□□□□ 0.47
SKA3-205ENST00000465471 LRRN3E7EW58 273 aa18■□□□□ 0.47
SKA3-205ENST00000465471 CNOT4O95628 575 aaKnown RBP18■□□□□ 0.47
SKA3-205ENST00000465471 MT-ND1P03886 318 aa18■□□□□ 0.47
SKA3-205ENST00000465471 POU2F1P14859 743 aa18■□□□□ 0.47
SKA3-205ENST00000465471 YAP1P46937 504 aaKnown RBP18■□□□□ 0.47
SKA3-205ENST00000465471 MS4A2Q01362 244 aa18■□□□□ 0.47
SKA3-205ENST00000465471 TMEM225Q6GV28 225 aa18■□□□□ 0.47
SKA3-205ENST00000465471 PGM2L1Q6PCE3 622 aa18■□□□□ 0.47
SKA3-205ENST00000465471 SLC46A3Q7Z3Q1 461 aa18■□□□□ 0.47
SKA3-205ENST00000465471 EPHX4Q8IUS5 362 aa18■□□□□ 0.47
SKA3-205ENST00000465471 ZNF295-AS1Q8N0V1 137 aa18■□□□□ 0.47
SKA3-205ENST00000465471 PIK3C3Q8NEB9 887 aa18■□□□□ 0.47
SKA3-205ENST00000465471 TMEM239Q8WW34 195 aa18■□□□□ 0.47
SKA3-205ENST00000465471 ASB9Q96DX5 294 aa18■□□□□ 0.47
SKA3-205ENST00000465471 HS6ST2Q96MM7 605 aa18■□□□□ 0.47
SKA3-205ENST00000465471 ZNF385AQ96PM9 386 aaKnown RBP18■□□□□ 0.47
SKA3-205ENST00000465471 BTBD10Q9BSF8 475 aa18■□□□□ 0.47
SKA3-205ENST00000465471 FKRPQ9H9S5 495 aa18■□□□□ 0.47
SKA3-205ENST00000465471 FANCFQ9NPI8 374 aa18■□□□□ 0.47
SKA3-205ENST00000465471 KCNN3Q9UGI6 736 aa18■□□□□ 0.47
SKA3-205ENST00000465471 MS4A18H0YCH9 400 aa17.99■□□□□ 0.47
SKA3-205ENST00000465471 KPNA4O00629 521 aaPredicted RBP17.99■□□□□ 0.47
SKA3-205ENST00000465471 GYG2O15488 501 aa17.99■□□□□ 0.47
SKA3-205ENST00000465471 CBLP22681 906 aa17.99■□□□□ 0.47
SKA3-205ENST00000465471 IFNA8P32881 189 aa17.99■□□□□ 0.47
SKA3-205ENST00000465471 UGT2B10P36537 528 aa17.99■□□□□ 0.47
SKA3-205ENST00000465471 SNTB1Q13884 538 aaKnown RBP17.99■□□□□ 0.47
SKA3-205ENST00000465471 MS4A18Q3C1V0 323 aa17.99■□□□□ 0.47
SKA3-205ENST00000465471 STAC2Q6ZMT1 411 aa17.99■□□□□ 0.47
SKA3-205ENST00000465471 Q6ZT83 130 aa17.99■□□□□ 0.47
SKA3-205ENST00000465471 CREB3L2Q70SY1 520 aa17.99■□□□□ 0.47
SKA3-205ENST00000465471 GPAT4Q86UL3 456 aa17.99■□□□□ 0.47
SKA3-205ENST00000465471 PFN4Q8NHR9 129 aa17.99■□□□□ 0.47
SKA3-205ENST00000465471 OXGR1Q96P68 337 aa17.99■□□□□ 0.47
SKA3-205ENST00000465471 THTPAQ9BU02 230 aa17.99■□□□□ 0.47
SKA3-205ENST00000465471 FNDC11Q9BVV2 318 aa17.99■□□□□ 0.47
SKA3-205ENST00000465471 ASPNQ9BXN1 380 aa17.99■□□□□ 0.47
SKA3-205ENST00000465471 ANKRD19PQ9H560 264 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms