RNA–Protein interactions for RNA: ENST00000464800.5

MCF2L-220, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 720 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-220ENST00000464800 NEURL3Q96EH8 262 aa12.65□□□□□ -0.38
MCF2L-220ENST00000464800 DOK1Q99704 481 aa12.65□□□□□ -0.38
MCF2L-220ENST00000464800 TAPBPLQ9BX59 468 aa12.65□□□□□ -0.38
MCF2L-220ENST00000464800 ADPRHL2Q9NX46 363 aa12.65□□□□□ -0.38
MCF2L-220ENST00000464800 MARCOQ9UEW3 520 aaPredicted RBP12.65□□□□□ -0.38
MCF2L-220ENST00000464800 SH3PXD2BA1X283 911 aa12.64□□□□□ -0.39
MCF2L-220ENST00000464800 HMGN4O00479 90 aa12.64□□□□□ -0.39
MCF2L-220ENST00000464800 CPSF4O95639 269 aaKnown RBP12.64□□□□□ -0.39
MCF2L-220ENST00000464800 IGKV3-15P01624 115 aa12.64□□□□□ -0.39
MCF2L-220ENST00000464800 IL1RL1Q01638 556 aa12.64□□□□□ -0.39
MCF2L-220ENST00000464800 HGFACQ04756 655 aa12.64□□□□□ -0.39
MCF2L-220ENST00000464800 EPS8Q12929 822 aa12.64□□□□□ -0.39
MCF2L-220ENST00000464800 MRPL2Q5T653 305 aaKnown RBP12.64□□□□□ -0.39
MCF2L-220ENST00000464800 ANXA8L1Q5VT79 327 aa12.64□□□□□ -0.39
MCF2L-220ENST00000464800 NIPAL3Q6P499 406 aa12.64□□□□□ -0.39
MCF2L-220ENST00000464800 DEF8Q6ZN54 512 aa12.64□□□□□ -0.39
MCF2L-220ENST00000464800 CREB3L2Q70SY1 520 aa12.64□□□□□ -0.39
MCF2L-220ENST00000464800 LINGO2Q7L985 606 aa12.64□□□□□ -0.39
MCF2L-220ENST00000464800 MYPOPQ86VE0 399 aaPredicted RBP12.64□□□□□ -0.39
MCF2L-220ENST00000464800 CDK20Q8IZL9 346 aa12.64□□□□□ -0.39
MCF2L-220ENST00000464800 C3orf56Q8N813 242 aa12.64□□□□□ -0.39
MCF2L-220ENST00000464800 VPS37AQ8NEZ2 397 aa12.64□□□□□ -0.39
MCF2L-220ENST00000464800 SGMS2Q8NHU3 365 aa12.64□□□□□ -0.39
MCF2L-220ENST00000464800 CKAP2Q8WWK9 683 aa12.64□□□□□ -0.39
MCF2L-220ENST00000464800 TRNT1Q96Q11 434 aaKnown RBP12.64□□□□□ -0.39
MCF2L-220ENST00000464800 SLC35A5Q9BS91 424 aa12.64□□□□□ -0.39
MCF2L-220ENST00000464800 NELFAQ9H3P2 528 aa12.64□□□□□ -0.39
MCF2L-220ENST00000464800 LGALS13Q9UHV8 139 aa12.64□□□□□ -0.39
MCF2L-220ENST00000464800 IGHV2OR16-5A0A0B4J2B6 119 aa12.63□□□□□ -0.39
MCF2L-220ENST00000464800 PRSS51A0A1B0GVH4 220 aa12.63□□□□□ -0.39
MCF2L-220ENST00000464800 PRAMEF27A3QJZ7 478 aa12.63□□□□□ -0.39
MCF2L-220ENST00000464800 UPK3AO75631 287 aa12.63□□□□□ -0.39
MCF2L-220ENST00000464800 VAMP5O95183 116 aa12.63□□□□□ -0.39
MCF2L-220ENST00000464800 BPGMP07738 259 aa12.63□□□□□ -0.39
MCF2L-220ENST00000464800 CELA3BP08861 270 aa12.63□□□□□ -0.39
MCF2L-220ENST00000464800 ADRA2AP08913 450 aa12.63□□□□□ -0.39
MCF2L-220ENST00000464800 NUDT17P0C025 328 aa12.63□□□□□ -0.39
MCF2L-220ENST00000464800 HOXB1P14653 301 aaPredicted RBP12.63□□□□□ -0.39
MCF2L-220ENST00000464800 CREB1P16220 341 aa12.63□□□□□ -0.39
MCF2L-220ENST00000464800 IL7RP16871 459 aa12.63□□□□□ -0.39
MCF2L-220ENST00000464800 RPS4Y1P22090 263 aaKnown RBP12.63□□□□□ -0.39
MCF2L-220ENST00000464800 COMPP49747 757 aaPredicted RBP12.63□□□□□ -0.39
MCF2L-220ENST00000464800 P2RY4P51582 365 aa12.63□□□□□ -0.39
MCF2L-220ENST00000464800 ROR2Q01974 943 aaKnown RBP12.63□□□□□ -0.39
MCF2L-220ENST00000464800 IFFO1Q0D2I5 559 aa12.63□□□□□ -0.39
MCF2L-220ENST00000464800 SYPL1Q16563 259 aa12.63□□□□□ -0.39
MCF2L-220ENST00000464800 GSTA3Q16772 222 aa12.63□□□□□ -0.39
MCF2L-220ENST00000464800 SMU1Q2TAY7 513 aa12.63□□□□□ -0.39
MCF2L-220ENST00000464800 PRAMEF8Q5VWM4 474 aa12.63□□□□□ -0.39
MCF2L-220ENST00000464800 PRAMEF7Q5VXH5 474 aa12.63□□□□□ -0.39
MCF2L-220ENST00000464800 SHQ1Q6PI26 577 aaKnown RBP12.63□□□□□ -0.39
MCF2L-220ENST00000464800 ZNF440Q8IYI8 595 aa12.63□□□□□ -0.39
MCF2L-220ENST00000464800 ANKFN1Q8N957 763 aa12.63□□□□□ -0.39
MCF2L-220ENST00000464800 ZNF418Q8TF45 676 aaPredicted RBP12.63□□□□□ -0.39
MCF2L-220ENST00000464800 PPP1R36Q96LQ0 422 aa12.63□□□□□ -0.39
MCF2L-220ENST00000464800 LINC00470Q9BZP3 86 aa12.63□□□□□ -0.39
MCF2L-220ENST00000464800 DPY30Q9C005 99 aa12.63□□□□□ -0.39
MCF2L-220ENST00000464800 SLC38A1Q9H2H9 487 aa12.63□□□□□ -0.39
MCF2L-220ENST00000464800 TPK1Q9H3S4 243 aa12.63□□□□□ -0.39
MCF2L-220ENST00000464800 MEGF8Q7Z7M0 2845 aa12.62□□□□□ -0.39
MCF2L-220ENST00000464800 TMEM129A0AVI4 362 aa12.62□□□□□ -0.39
MCF2L-220ENST00000464800 LYNX1G3V0Z9 82 aa12.62□□□□□ -0.39
MCF2L-220ENST00000464800 FRS3O43559 492 aa12.62□□□□□ -0.39
MCF2L-220ENST00000464800 DBIP07108 87 aaKnown RBP12.62□□□□□ -0.39
MCF2L-220ENST00000464800 CHRM4P08173 479 aa12.62□□□□□ -0.39
MCF2L-220ENST00000464800 LYNX1P0DP58 116 aa12.62□□□□□ -0.39
MCF2L-220ENST00000464800 CBR1P16152 277 aa12.62□□□□□ -0.39
MCF2L-220ENST00000464800 EGR1P18146 543 aa12.62□□□□□ -0.39
MCF2L-220ENST00000464800 ANXA11P50995 505 aaKnown RBP12.62□□□□□ -0.39
MCF2L-220ENST00000464800 NPRL3Q12980 569 aa12.62□□□□□ -0.39
MCF2L-220ENST00000464800 BNIP2Q12982 314 aa12.62□□□□□ -0.39
MCF2L-220ENST00000464800 SNTB2Q13425 540 aaKnown RBP12.62□□□□□ -0.39
MCF2L-220ENST00000464800 DAG1Q14118 895 aa12.62□□□□□ -0.39
MCF2L-220ENST00000464800 LRRC74BQ6ZQY2 392 aa12.62□□□□□ -0.39
MCF2L-220ENST00000464800 RNF130Q86XS8 419 aa12.62□□□□□ -0.39
MCF2L-220ENST00000464800 GCDHQ92947 438 aaPredicted RBP12.62□□□□□ -0.39
MCF2L-220ENST00000464800 TMEM186Q96B77 213 aa12.62□□□□□ -0.39
MCF2L-220ENST00000464800 ZIM3Q96PE6 472 aa12.62□□□□□ -0.39
MCF2L-220ENST00000464800 AKTIPQ9H8T0 292 aa12.62□□□□□ -0.39
MCF2L-220ENST00000464800 HIF1ANQ9NWT6 349 aa12.62□□□□□ -0.39
MCF2L-220ENST00000464800 RASD1Q9Y272 281 aa12.62□□□□□ -0.39
MCF2L-220ENST00000464800 GRIP1Q9Y3R0 1128 aa12.62□□□□□ -0.39
MCF2L-220ENST00000464800 A8MVM7 634 aa12.61□□□□□ -0.39
MCF2L-220ENST00000464800 FAM157AC9JC47 383 aa12.61□□□□□ -0.39
MCF2L-220ENST00000464800 ITM2AO43736 263 aa12.61□□□□□ -0.39
MCF2L-220ENST00000464800 TYROBPO43914 113 aa12.61□□□□□ -0.39
MCF2L-220ENST00000464800 RGS9O75916 674 aaPredicted RBP12.61□□□□□ -0.39
MCF2L-220ENST00000464800 IGFBP1P08833 259 aaPredicted RBP12.61□□□□□ -0.39
MCF2L-220ENST00000464800 ARR3P36575 388 aa12.61□□□□□ -0.39
MCF2L-220ENST00000464800 ETV4P43268 484 aa12.61□□□□□ -0.39
MCF2L-220ENST00000464800 TXNL4AP83876 142 aaKnown RBP12.61□□□□□ -0.39
MCF2L-220ENST00000464800 POU3F1Q03052 451 aaPredicted RBP12.61□□□□□ -0.39
MCF2L-220ENST00000464800 CASP8Q14790 479 aa12.61□□□□□ -0.39
MCF2L-220ENST00000464800 PDCD2Q16342 344 aaPredicted RBP12.61□□□□□ -0.39
MCF2L-220ENST00000464800 DPY19L1Q2PZI1 675 aa12.61□□□□□ -0.39
MCF2L-220ENST00000464800 C1orf140Q5VVS0 124 aa12.61□□□□□ -0.39
MCF2L-220ENST00000464800 WBP2NLQ6ICG8 309 aa12.61□□□□□ -0.39
MCF2L-220ENST00000464800 KRT80Q6KB66 452 aa12.61□□□□□ -0.39
MCF2L-220ENST00000464800 EPHX4Q8IUS5 362 aa12.61□□□□□ -0.39
MCF2L-220ENST00000464800 NUDCD3Q8IVD9 361 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms