RNA–Protein interactions for RNA: ENST00000464286.1

CLSTN1-204, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 563 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-204ENST00000464286 A6NJ64 397 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 LRRC72A6NJI9 287 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 H3BUI4 141 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 H7C417 338 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 DNASE2O00115 360 aaPredicted RBP6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 BCL2L11O43521 198 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 XRCC3O43542 346 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 TMPRSS11DO60235 418 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 LCMT2O60294 686 aaKnown RBP6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 CDC40O60508 579 aaKnown RBP eCLIP6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 ERAL1O75616 437 aaKnown RBP6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 ATG12O94817 140 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 PAPLNO95428 1278 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 LRG1P02750 347 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 RLN1P04808 185 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 ANKRD34CP0C6C1 535 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 SMIM6P0DI80 62 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 CTSAP10619 480 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 RPL17P18621 184 aaKnown RBP6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 HIST1H1TP22492 207 aaPredicted RBP6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 SLC2A5P22732 501 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 EDNRAP25101 427 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 TEAD1P28347 426 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 PDHA2P29803 388 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 ACVR1BP36896 505 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 RAD52P43351 418 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 RAB13P51153 203 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 P2RX1P51575 399 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 ERVFC1P60507 584 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 MEF2AQ02078 507 aaPredicted RBP6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 ZNF85Q03923 595 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 SRSF4Q08170 494 aaKnown RBP6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 HMGN3Q15651 99 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 CEBPEQ15744 281 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 STK11Q15831 433 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 MICBQ29980 383 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 AMZ1Q400G9 498 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 OR5M10Q6IEU7 315 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 SLC48A1Q6P1K1 146 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 C3orf33Q6P1S2 294 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 ENPP7Q6UWV6 458 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 ALKAL2Q6UX46 152 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 DNM1P46Q6ZS02 220 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 Q6ZTK2 550 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 MOB3CQ70IA8 216 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 MTSS1LQ765P7 747 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 NDUFAF7Q7L592 441 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 FAM122BQ7Z309 247 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 ZNF546Q86UE3 836 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 PAQR7Q86WK9 346 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 SLC35F2Q8IXU6 374 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 ZNF619Q8N2I2 560 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 KCNRGQ8N5I3 272 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 INO80EQ8NBZ0 244 aaPredicted RBP6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 BBS1Q8NFJ9 593 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 OR2L5Q8NG80 312 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 OR1S1Q8NH92 325 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 OR14A16Q8NHC5 309 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 ST8SIA2Q92186 375 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 KISS1RQ969F8 398 aaPredicted RBP6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 ARL11Q969Q4 196 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 RAB7BQ96AH8 199 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 BPIFA2Q96DR5 249 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 MRPS24Q96EL2 167 aaKnown RBP6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 NARS2Q96I59 477 aaKnown RBP6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 ARL5BQ96KC2 179 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 CXorf58Q96LI9 332 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 TRIM2Q9C040 744 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 ZDHHC5Q9C0B5 715 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 SLC7A5P2Q9GIP4 190 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 OR2AG1Q9H205 316 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 OR52A5Q9H2C5 316 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 OR51V1Q9H2C8 321 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 ZNF334Q9HCZ1 680 aaPredicted RBP6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 APMAPQ9HDC9 416 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 EQTNQ9NQ60 294 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 PRSS16Q9NQE7 514 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 TDP1Q9NUW8 608 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 MTFP1Q9UDX5 166 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 SERTAD3Q9UJW9 196 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 ZNF223Q9UK11 482 aaPredicted RBP6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 SLC7A7Q9UM01 511 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 FOXJ3Q9UPW0 622 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 MOKQ9UQ07 419 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 SPACA6W5XKT8 324 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 OBSL1O75147 1896 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 KIAA1549LQ6ZVL6 1849 aa6.61□□□□□ -1.35
CLSTN1-204ENST00000464286 DOCK3Q8IZD9 2030 aa6.6□□□□□ -1.35
CLSTN1-204ENST00000464286 LRIT2A6NDA9 550 aa6.6□□□□□ -1.35
CLSTN1-204ENST00000464286 ANTXRLA6NF34 631 aa6.6□□□□□ -1.35
CLSTN1-204ENST00000464286 PCP4L1A6NKN8 68 aa6.6□□□□□ -1.35
CLSTN1-204ENST00000464286 OR5K4A6NMS3 321 aa6.6□□□□□ -1.35
CLSTN1-204ENST00000464286 LEFTY2O00292 366 aa6.6□□□□□ -1.35
CLSTN1-204ENST00000464286 GOSR2O14653 212 aa6.6□□□□□ -1.35
CLSTN1-204ENST00000464286 YKT6O15498 198 aa6.6□□□□□ -1.35
CLSTN1-204ENST00000464286 SRPX2O60687 465 aaPredicted RBP6.6□□□□□ -1.35
CLSTN1-204ENST00000464286 B4GALT2O60909 372 aa6.6□□□□□ -1.35
CLSTN1-204ENST00000464286 CTNSO60931 367 aa6.6□□□□□ -1.35
CLSTN1-204ENST00000464286 LEFTY1O75610 366 aa6.6□□□□□ -1.35
CLSTN1-204ENST00000464286 GLSO94925 669 aaPredicted RBP6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 75.9 ms