RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 C19orf47Q8N9M1 422 aaKnown RBP3.32□□□□□ -1.88
COL8A1-205ENST00000463753 OR11G2Q8NGC1 345 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 OR4A4PQ8NGN8 299 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 OR1J4Q8NGS1 313 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 OR8D1Q8WZ84 308 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 TMEM159Q96B96 161 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 ORAI1Q96D31 301 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 FUBP3Q96I24 572 aaKnown RBP eCLIP3.32□□□□□ -1.88
COL8A1-205ENST00000463753 C7orf34Q96L11 122 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 JSRP1Q96MG2 331 aaPredicted RBP3.32□□□□□ -1.88
COL8A1-205ENST00000463753 KLHL5Q96PQ7 755 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 FAM193BQ96PV7 902 aaPredicted RBP3.32□□□□□ -1.88
COL8A1-205ENST00000463753 OR52E6Q96RD3 313 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 S100A13Q99584 98 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 COPS8Q99627 209 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 DPH2Q9BQC3 489 aaPredicted RBP3.32□□□□□ -1.88
COL8A1-205ENST00000463753 INPP5KQ9BT40 448 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 URM1Q9BTM9 101 aaKnown RBP3.32□□□□□ -1.88
COL8A1-205ENST00000463753 TSSK6Q9BXA6 273 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 POTEKPQ9BYX7 375 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 GPR62Q9BZJ7 368 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 EGLN1Q9GZT9 426 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 OR52A5Q9H2C5 316 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 GPN1Q9HCN4 374 aaPredicted RBP3.32□□□□□ -1.88
COL8A1-205ENST00000463753 CTPS2Q9NRF8 586 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 C1GALT1Q9NS00 363 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 CYSLTR2Q9NS75 346 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 TMEM45AQ9NWC5 275 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 FAM120CQ9NX05 1096 aaKnown RBP3.32□□□□□ -1.88
COL8A1-205ENST00000463753 SPG21Q9NZD8 308 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 CNOT2Q9NZN8 540 aaKnown RBP3.32□□□□□ -1.88
COL8A1-205ENST00000463753 ZIM2Q9NZV7 527 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 RCC2Q9P258 522 aaKnown RBP3.32□□□□□ -1.88
COL8A1-205ENST00000463753 SEMA5BQ9P283 1151 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 ARHGAP28Q9P2N2 729 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 ZNF346Q9UL40 294 aaKnown RBP3.32□□□□□ -1.88
COL8A1-205ENST00000463753 STYXL1Q9Y6J8 313 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 A0A0U1RQV5 110 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 C20orf202A1L168 122 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 OR2M5A3KFT3 312 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 C7orf77A4D0Y5 90 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 DDTLA6NHG4 134 aaPredicted RBP3.32□□□□□ -1.88
COL8A1-205ENST00000463753 FAM183AA6NL82 134 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 HMSDA8MTL9 139 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 SEC14L6B5MCN3 397 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 NPIPB8E9PQR5 432 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 BLOC1S5-TXNDC5H3BN57 136 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 M0QZ24 198 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 MEIS2O14770 477 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 BCAT2O15382 392 aaPredicted RBP3.32□□□□□ -1.88
COL8A1-205ENST00000463753 SUV39H1O43463 412 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 CTNSO60931 367 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 ENDOD1O94919 500 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 GOSR1O95249 250 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 TIAF1O95411 115 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 NFATC1O95644 943 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 SOD1P00441 154 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 CST3P01034 146 aaPredicted RBP3.32□□□□□ -1.88
COL8A1-205ENST00000463753 MT-ND5P03915 603 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 OPN1SWP03999 348 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 C4BPAP04003 597 aaKnown RBP3.32□□□□□ -1.88
COL8A1-205ENST00000463753 SRPRAP08240 638 aaKnown RBP3.32□□□□□ -1.88
COL8A1-205ENST00000463753 IGFBP1P08833 259 aaPredicted RBP3.32□□□□□ -1.88
COL8A1-205ENST00000463753 NR2F6P10588 404 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 ITGB5P18084 799 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 CELP19835 753 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 MAPK8P45983 427 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 ARL4DP49703 201 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 FGF8P55075 233 aaPredicted RBP3.32□□□□□ -1.88
COL8A1-205ENST00000463753 RPS26P62854 115 aaKnown RBP3.32□□□□□ -1.88
COL8A1-205ENST00000463753 TTLL4Q14679 1199 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 SLC10A6Q3KNW5 377 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 NBPF12Q5TAG4 269 aaPredicted RBP3.32□□□□□ -1.88
COL8A1-205ENST00000463753 HACD4Q5VWC8 232 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 GGNBP1Q5YKI7 109 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 NCBP2-AS2Q69YL0 99 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 OGFOD3Q6PK18 319 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 IL27RAQ6UWB1 636 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 APOOLQ6UXV4 268 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 IQCHQ86VS3 1027 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 UNC93AQ86WB7 457 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 PTOV1Q86YD1 416 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 MSRB3Q8IXL7 192 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 C12orf76Q8N812 135 aaPredicted RBP3.32□□□□□ -1.88
COL8A1-205ENST00000463753 SMRP1Q8NCR6 262 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 OR5M3Q8NGP4 307 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 TERB2Q8NHR7 220 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 SH3RF2Q8TEC5 729 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 THAP4Q8WY91 577 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 TNFRSF14Q92956 283 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 PNPLA2Q96AD5 504 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 FAM46AQ96IP4 442 aaKnown RBP3.32□□□□□ -1.88
COL8A1-205ENST00000463753 ZNF354BQ96LW1 612 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 HSPA12BQ96MM6 686 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 PTCHD1Q96NR3 888 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 TEAD3Q99594 435 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 GPR21Q99679 349 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 SULT4A1Q9BR01 284 aa3.32□□□□□ -1.88
COL8A1-205ENST00000463753 SF3B5Q9BWJ5 86 aaKnown RBP3.32□□□□□ -1.88
COL8A1-205ENST00000463753 SEC61A2Q9H9S3 476 aa3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms