RNA–Protein interactions for RNA: ENST00000463440.1

COL1A1-202, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 614 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-202ENST00000463440 GZMMP51124 257 aa14.31□□□□□ -0.12
COL1A1-202ENST00000463440 P2RY4P51582 365 aa14.31□□□□□ -0.12
COL1A1-202ENST00000463440 NRF1Q16656 503 aa14.31□□□□□ -0.12
COL1A1-202ENST00000463440 NCMAPQ5T1S8 102 aa14.31□□□□□ -0.12
COL1A1-202ENST00000463440 SWT1Q5T5J6 900 aaKnown RBP14.31□□□□□ -0.12
COL1A1-202ENST00000463440 ZIC4Q8N9L1 334 aa14.31□□□□□ -0.12
COL1A1-202ENST00000463440 POMGNT2Q8NAT1 580 aa14.31□□□□□ -0.12
COL1A1-202ENST00000463440 TAAR8Q969N4 342 aa14.31□□□□□ -0.12
COL1A1-202ENST00000463440 ZNF385AQ96PM9 386 aaKnown RBP14.31□□□□□ -0.12
COL1A1-202ENST00000463440 EPYCQ99645 322 aa14.31□□□□□ -0.12
COL1A1-202ENST00000463440 MCHR1Q99705 422 aa14.31□□□□□ -0.12
COL1A1-202ENST00000463440 ARHGDIGQ99819 225 aa14.31□□□□□ -0.12
COL1A1-202ENST00000463440 SLCO5A1Q9H2Y9 848 aa14.31□□□□□ -0.12
COL1A1-202ENST00000463440 SLC7A10Q9NS82 523 aa14.31□□□□□ -0.12
COL1A1-202ENST00000463440 ARMCX1Q9P291 453 aa14.31□□□□□ -0.12
COL1A1-202ENST00000463440 RNF115Q9Y4L5 304 aa14.31□□□□□ -0.12
COL1A1-202ENST00000463440 HIVEP1P15822 2718 aa14.31□□□□□ -0.12
COL1A1-202ENST00000463440 IGKV1D-42A0A075B6H8 117 aa14.3□□□□□ -0.12
COL1A1-202ENST00000463440 HS3ST1O14792 307 aa14.3□□□□□ -0.12
COL1A1-202ENST00000463440 AIM2O14862 343 aa14.3□□□□□ -0.12
COL1A1-202ENST00000463440 CLOCKO15516 846 aa14.3□□□□□ -0.12
COL1A1-202ENST00000463440 TPST2O60704 377 aa14.3□□□□□ -0.12
COL1A1-202ENST00000463440 SMPD2O60906 423 aa14.3□□□□□ -0.12
COL1A1-202ENST00000463440 KRT33AO76009 404 aa14.3□□□□□ -0.12
COL1A1-202ENST00000463440 PLAUP00749 431 aa14.3□□□□□ -0.12
COL1A1-202ENST00000463440 ITGA5P08648 1049 aa14.3□□□□□ -0.12
COL1A1-202ENST00000463440 CDH12P55289 794 aa14.3□□□□□ -0.12
COL1A1-202ENST00000463440 TGFBR3Q03167 851 aa14.3□□□□□ -0.12
COL1A1-202ENST00000463440 MFSD13AQ14CX5 517 aa14.3□□□□□ -0.12
COL1A1-202ENST00000463440 TSPO2Q5TGU0 170 aa14.3□□□□□ -0.12
COL1A1-202ENST00000463440 ERICH5Q6P6B1 374 aa14.3□□□□□ -0.12
COL1A1-202ENST00000463440 ZNF613Q6PF04 617 aa14.3□□□□□ -0.12
COL1A1-202ENST00000463440 CREB3L2Q70SY1 520 aa14.3□□□□□ -0.12
COL1A1-202ENST00000463440 CCDC80Q76M96 950 aa14.3□□□□□ -0.12
COL1A1-202ENST00000463440 ABHD12BQ7Z5M8 362 aaPredicted RBP14.3□□□□□ -0.12
COL1A1-202ENST00000463440 CALHM3Q86XJ0 350 aa14.3□□□□□ -0.12
COL1A1-202ENST00000463440 TGIF2LYQ8IUE0 185 aa14.3□□□□□ -0.12
COL1A1-202ENST00000463440 GPR32P1Q8NGA4 272 aa14.3□□□□□ -0.12
COL1A1-202ENST00000463440 OR6S1Q8NH40 331 aa14.3□□□□□ -0.12
COL1A1-202ENST00000463440 RP9Q8TA86 221 aaKnown RBP14.3□□□□□ -0.12
COL1A1-202ENST00000463440 TAMM41Q96BW9 452 aa14.3□□□□□ -0.12
COL1A1-202ENST00000463440 WFDC6Q9BQY6 131 aa14.3□□□□□ -0.12
COL1A1-202ENST00000463440 ROS1P08922 2347 aa14.29□□□□□ -0.12
COL1A1-202ENST00000463440 OR6C65A6NJZ3 312 aa14.29□□□□□ -0.12
COL1A1-202ENST00000463440 PDLIM1O00151 329 aa14.29□□□□□ -0.12
COL1A1-202ENST00000463440 FZD7O75084 574 aa14.29□□□□□ -0.12
COL1A1-202ENST00000463440 ZNF43P17038 809 aa14.29□□□□□ -0.12
COL1A1-202ENST00000463440 CD247P20963 164 aa14.29□□□□□ -0.12
COL1A1-202ENST00000463440 MPGP29372 298 aa14.29□□□□□ -0.12
COL1A1-202ENST00000463440 VEZF1Q14119 521 aa14.29□□□□□ -0.12
COL1A1-202ENST00000463440 ADAM5Q6NVV9 412 aa14.29□□□□□ -0.12
COL1A1-202ENST00000463440 SEZ6L2Q6UXD5 910 aa14.29□□□□□ -0.12
COL1A1-202ENST00000463440 H1FNTQ75WM6 255 aaPredicted RBP14.29□□□□□ -0.12
COL1A1-202ENST00000463440 P3H2Q8IVL5 708 aa14.29□□□□□ -0.12
COL1A1-202ENST00000463440 ZNF611Q8N823 705 aa14.29□□□□□ -0.12
COL1A1-202ENST00000463440 C1orf162Q8NEQ5 155 aaPredicted RBP14.29□□□□□ -0.12
COL1A1-202ENST00000463440 OR6T1Q8NGN1 323 aa14.29□□□□□ -0.12
COL1A1-202ENST00000463440 VANGL1Q8TAA9 524 aaPredicted RBP14.29□□□□□ -0.12
COL1A1-202ENST00000463440 AKAP1Q92667 903 aaKnown RBP eCLIP14.29□□□□□ -0.12
COL1A1-202ENST00000463440 PROX1Q92786 737 aa14.29□□□□□ -0.12
COL1A1-202ENST00000463440 MUS81Q96NY9 551 aa14.29□□□□□ -0.12
COL1A1-202ENST00000463440 OXGR1Q96P68 337 aa14.29□□□□□ -0.12
COL1A1-202ENST00000463440 TMEM43Q9BTV4 400 aa14.29□□□□□ -0.12
COL1A1-202ENST00000463440 B3GALT5Q9Y2C3 310 aa14.29□□□□□ -0.12
COL1A1-202ENST00000463440 TEP1Q99973 2627 aaKnown RBP14.29□□□□□ -0.12
COL1A1-202ENST00000463440 DSCAMO60469 2012 aa14.29□□□□□ -0.12
COL1A1-202ENST00000463440 MED13LQ71F56 2210 aa14.29□□□□□ -0.12
COL1A1-202ENST00000463440 ITPR3Q14573 2671 aa14.28□□□□□ -0.12
COL1A1-202ENST00000463440 DPRXA6NFQ7 191 aa14.28□□□□□ -0.12
COL1A1-202ENST00000463440 CPSF4LA6NMK7 179 aaKnown RBP14.28□□□□□ -0.12
COL1A1-202ENST00000463440 M0R082 166 aa14.28□□□□□ -0.12
COL1A1-202ENST00000463440 ARHGEF9O43307 516 aa14.28□□□□□ -0.12
COL1A1-202ENST00000463440 CHP2O43745 196 aa14.28□□□□□ -0.12
COL1A1-202ENST00000463440 IFNA14P01570 189 aa14.28□□□□□ -0.12
COL1A1-202ENST00000463440 CD99P14209 185 aa14.28□□□□□ -0.12
COL1A1-202ENST00000463440 GRPRP30550 384 aa14.28□□□□□ -0.12
COL1A1-202ENST00000463440 HOXC12P31275 282 aa14.28□□□□□ -0.12
COL1A1-202ENST00000463440 FOXG1P55316 489 aaPredicted RBP14.28□□□□□ -0.12
COL1A1-202ENST00000463440 NKX6-1P78426 367 aaPredicted RBP14.28□□□□□ -0.12
COL1A1-202ENST00000463440 IL1RL1Q01638 556 aa14.28□□□□□ -0.12
COL1A1-202ENST00000463440 BSPH1Q075Z2 132 aa14.28□□□□□ -0.12
COL1A1-202ENST00000463440 C1DQ13901 141 aaKnown RBP14.28□□□□□ -0.12
COL1A1-202ENST00000463440 GABRA6Q16445 453 aa14.28□□□□□ -0.12
COL1A1-202ENST00000463440 ENTPD8Q5MY95 495 aa14.28□□□□□ -0.12
COL1A1-202ENST00000463440 C9orf135Q5VTT2 229 aa14.28□□□□□ -0.12
COL1A1-202ENST00000463440 NIPAL3Q6P499 406 aa14.28□□□□□ -0.12
COL1A1-202ENST00000463440 RAI1Q7Z5J4 1906 aaPredicted RBP14.28□□□□□ -0.12
COL1A1-202ENST00000463440 ARPINQ7Z6K5 226 aa14.28□□□□□ -0.12
COL1A1-202ENST00000463440 EPHX4Q8IUS5 362 aa14.28□□□□□ -0.12
COL1A1-202ENST00000463440 LRRC75A-AS1Q8N1F1 130 aa14.28□□□□□ -0.12
COL1A1-202ENST00000463440 C17orf78Q8N4C9 275 aa14.28□□□□□ -0.12
COL1A1-202ENST00000463440 POU5F2Q8N7G0 328 aa14.28□□□□□ -0.12
COL1A1-202ENST00000463440 ADPRHL1Q8NDY3 354 aa14.28□□□□□ -0.12
COL1A1-202ENST00000463440 OR52N5Q8NH56 324 aa14.28□□□□□ -0.12
COL1A1-202ENST00000463440 ZNF417Q8TAU3 575 aa14.28□□□□□ -0.12
COL1A1-202ENST00000463440 RCN3Q96D15 328 aa14.28□□□□□ -0.12
COL1A1-202ENST00000463440 ZNF583Q96ND8 569 aa14.28□□□□□ -0.12
COL1A1-202ENST00000463440 ZNF587Q96SQ5 575 aaPredicted RBP14.28□□□□□ -0.12
COL1A1-202ENST00000463440 ASPNQ9BXN1 380 aa14.28□□□□□ -0.12
COL1A1-202ENST00000463440 AMBRA1Q9C0C7 1298 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms