RNA–Protein interactions for RNA: ENST00000463007.5

HDAC4-208, Transcript of histone deacetylase 4, humanhuman

TSL 1 (best)

Gene HDAC4, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-208ENST00000463007 MTHFD2LQ9H903 347 aaPredicted RBP11.42□□□□□ -0.58
HDAC4-208ENST00000463007 FGF22Q9HCT0 170 aa11.42□□□□□ -0.58
HDAC4-208ENST00000463007 KRCC1Q9NPI7 259 aaPredicted RBP11.42□□□□□ -0.58
HDAC4-208ENST00000463007 KCNE5Q9UJ90 142 aa11.42□□□□□ -0.58
HDAC4-208ENST00000463007 ING1Q9UK53 422 aaPredicted RBP11.42□□□□□ -0.58
HDAC4-208ENST00000463007 BAIAP2Q9UQB8 552 aa11.42□□□□□ -0.58
HDAC4-208ENST00000463007 A0A1W2PQU0 124 aa11.42□□□□□ -0.58
HDAC4-208ENST00000463007 hCG_1807616A0A1W2PRN6 198 aa11.42□□□□□ -0.58
HDAC4-208ENST00000463007 BLOC1S5-TXNDC5H3BN57 136 aa11.42□□□□□ -0.58
HDAC4-208ENST00000463007 H7C1C5 153 aa11.42□□□□□ -0.58
HDAC4-208ENST00000463007 EML2O95834 649 aa11.42□□□□□ -0.58
HDAC4-208ENST00000463007 PTBP1P26599 531 aaKnown RBP eCLIP11.42□□□□□ -0.586e-7■■■■□ 24.3
HDAC4-208ENST00000463007 TSFMP43897 325 aaKnown RBP11.42□□□□□ -0.58
HDAC4-208ENST00000463007 MMP15P51511 669 aa11.42□□□□□ -0.58
HDAC4-208ENST00000463007 LCN6P62502 163 aa11.42□□□□□ -0.58
HDAC4-208ENST00000463007 ATRAIDQ6UW56 229 aa11.42□□□□□ -0.58
HDAC4-208ENST00000463007 TMED4Q7Z7H5 227 aa11.42□□□□□ -0.58
HDAC4-208ENST00000463007 ZPLD1Q8TCW7 415 aa11.42□□□□□ -0.58
HDAC4-208ENST00000463007 ASB12Q8WXK4 309 aa11.42□□□□□ -0.58
HDAC4-208ENST00000463007 APOOQ9BUR5 198 aa11.42□□□□□ -0.58
HDAC4-208ENST00000463007 SLC6A17Q9H1V8 727 aa11.42□□□□□ -0.58
HDAC4-208ENST00000463007 PPA2Q9H2U2 334 aa11.42□□□□□ -0.58
HDAC4-208ENST00000463007 ZMAT3Q9HA38 289 aaKnown RBP11.42□□□□□ -0.58
HDAC4-208ENST00000463007 CA5BQ9Y2D0 317 aa11.42□□□□□ -0.58
HDAC4-208ENST00000463007 G3V3Q6 166 aa11.41□□□□□ -0.58
HDAC4-208ENST00000463007 RCBTB2O95199 551 aa11.41□□□□□ -0.58
HDAC4-208ENST00000463007 IGF2P01344 180 aa11.41□□□□□ -0.58
HDAC4-208ENST00000463007 HOXD4P09016 255 aaPredicted RBP11.41□□□□□ -0.58
HDAC4-208ENST00000463007 COL9A1P20849 921 aa11.41□□□□□ -0.58
HDAC4-208ENST00000463007 CCR4P51679 360 aa11.41□□□□□ -0.58
HDAC4-208ENST00000463007 GBX2P52951 348 aaPredicted RBP11.41□□□□□ -0.58
HDAC4-208ENST00000463007 SIRPAP78324 504 aa11.41□□□□□ -0.58
HDAC4-208ENST00000463007 HYAL1Q12794 435 aa11.41□□□□□ -0.58
HDAC4-208ENST00000463007 KLF9Q13886 244 aaPredicted RBP11.41□□□□□ -0.58
HDAC4-208ENST00000463007 GPALPP1Q8IXQ4 340 aa11.41□□□□□ -0.58
HDAC4-208ENST00000463007 LRRC25Q8N386 305 aaPredicted RBP11.41□□□□□ -0.58
HDAC4-208ENST00000463007 FCAMRQ8WWV6 532 aa11.41□□□□□ -0.58
HDAC4-208ENST00000463007 RASD2Q96D21 266 aa11.41□□□□□ -0.58
HDAC4-208ENST00000463007 S1PR5Q9H228 398 aa11.41□□□□□ -0.58
HDAC4-208ENST00000463007 POMT2Q9UKY4 750 aa11.41□□□□□ -0.58
HDAC4-208ENST00000463007 A6NCN8 305 aa11.41□□□□□ -0.58
HDAC4-208ENST00000463007 GOSR2O14653 212 aa11.41□□□□□ -0.58
HDAC4-208ENST00000463007 ZNF35P13682 527 aa11.41□□□□□ -0.58
HDAC4-208ENST00000463007 PVRP15151 417 aa11.41□□□□□ -0.58
HDAC4-208ENST00000463007 SRMP19623 302 aa11.41□□□□□ -0.58
HDAC4-208ENST00000463007 GDI1P31150 447 aa11.41□□□□□ -0.58
HDAC4-208ENST00000463007 CENPAP49450 140 aa11.41□□□□□ -0.58
HDAC4-208ENST00000463007 PGDP52209 483 aa11.41□□□□□ -0.58
HDAC4-208ENST00000463007 PPP2CBP62714 309 aa11.41□□□□□ -0.58
HDAC4-208ENST00000463007 PPP2CAP67775 309 aa11.41□□□□□ -0.58
HDAC4-208ENST00000463007 GUCA2AQ02747 115 aa11.41□□□□□ -0.58
HDAC4-208ENST00000463007 SLC22A10Q63ZE4 541 aa11.41□□□□□ -0.58
HDAC4-208ENST00000463007 TMPRSS12Q86WS5 348 aa11.41□□□□□ -0.58
HDAC4-208ENST00000463007 GJD3Q8N144 294 aa11.41□□□□□ -0.58
HDAC4-208ENST00000463007 MFSD9Q8NBP5 474 aa11.41□□□□□ -0.58
HDAC4-208ENST00000463007 OR4N2Q8NGD1 307 aa11.41□□□□□ -0.58
HDAC4-208ENST00000463007 OR4D10Q8NGI6 311 aa11.41□□□□□ -0.58
HDAC4-208ENST00000463007 AHCYL2Q96HN2 611 aaKnown RBP11.41□□□□□ -0.58
HDAC4-208ENST00000463007 SAV1Q9H4B6 383 aaPredicted RBP11.41□□□□□ -0.58
HDAC4-208ENST00000463007 IKZF2Q9UKS7 526 aa11.41□□□□□ -0.58
HDAC4-208ENST00000463007 PCOLCE2Q9UKZ9 415 aa11.41□□□□□ -0.58
HDAC4-208ENST00000463007 SESN1Q9Y6P5 492 aa11.41□□□□□ -0.58
HDAC4-208ENST00000463007 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.4□□□□□ -0.58
HDAC4-208ENST00000463007 PYCARD-AS1I3L0S3 204 aa11.4□□□□□ -0.58
HDAC4-208ENST00000463007 SYT5O00445 386 aa11.4□□□□□ -0.58
HDAC4-208ENST00000463007 PDCD5O14737 125 aa11.4□□□□□ -0.58
HDAC4-208ENST00000463007 RNGTTO60942 597 aaKnown RBP11.4□□□□□ -0.58
HDAC4-208ENST00000463007 ATP1B1P05026 303 aa11.4□□□□□ -0.58
HDAC4-208ENST00000463007 OR8G3PP0DMU2 310 aa11.4□□□□□ -0.58
HDAC4-208ENST00000463007 CDK2P24941 298 aa11.4□□□□□ -0.58
HDAC4-208ENST00000463007 NDUFS1P28331 727 aa11.4□□□□□ -0.58
HDAC4-208ENST00000463007 NRG3P56975 720 aa11.4□□□□□ -0.58
HDAC4-208ENST00000463007 ERVK-25P63136 954 aa11.4□□□□□ -0.58
HDAC4-208ENST00000463007 TMEM44Q2T9K0 475 aa11.4□□□□□ -0.58
HDAC4-208ENST00000463007 PRAMEF8Q5VWM4 474 aa11.4□□□□□ -0.58
HDAC4-208ENST00000463007 PRAMEF7Q5VXH5 474 aa11.4□□□□□ -0.58
HDAC4-208ENST00000463007 VN1R4Q7Z5H5 301 aa11.4□□□□□ -0.58
HDAC4-208ENST00000463007 PAQR7Q86WK9 346 aa11.4□□□□□ -0.58
HDAC4-208ENST00000463007 LCN9Q8WX39 176 aa11.4□□□□□ -0.58
HDAC4-208ENST00000463007 GIMAP5Q96F15 307 aa11.4□□□□□ -0.58
HDAC4-208ENST00000463007 C10orf90Q96M02 699 aa11.4□□□□□ -0.58
HDAC4-208ENST00000463007 SRA1Q9HD15 236 aaKnown RBP11.4□□□□□ -0.58
HDAC4-208ENST00000463007 CMC2Q9NRP2 79 aa11.4□□□□□ -0.58
HDAC4-208ENST00000463007 CALML5Q9NZT1 146 aa11.4□□□□□ -0.58
HDAC4-208ENST00000463007 SIGLEC7Q9Y286 467 aa11.4□□□□□ -0.58
HDAC4-208ENST00000463007 SLC35A3Q9Y2D2 325 aa11.4□□□□□ -0.58
HDAC4-208ENST00000463007 OR5K3A6NET4 321 aa11.4□□□□□ -0.58
HDAC4-208ENST00000463007 TVP23AA6NH52 213 aa11.4□□□□□ -0.58
HDAC4-208ENST00000463007 TRIM77I1YAP6 450 aa11.4□□□□□ -0.58
HDAC4-208ENST00000463007 CREBL2O60519 120 aaPredicted RBP11.4□□□□□ -0.58
HDAC4-208ENST00000463007 ADAM11O75078 769 aa11.4□□□□□ -0.58
HDAC4-208ENST00000463007 ARL6IP5O75915 188 aa11.4□□□□□ -0.58
HDAC4-208ENST00000463007 KRT33AO76009 404 aa11.4□□□□□ -0.58
HDAC4-208ENST00000463007 PRKAR1BP31321 381 aa11.4□□□□□ -0.58
HDAC4-208ENST00000463007 PTH2RP49190 550 aa11.4□□□□□ -0.58
HDAC4-208ENST00000463007 SHHQ15465 462 aa11.4□□□□□ -0.58
HDAC4-208ENST00000463007 C4orf46Q504U0 113 aa11.4□□□□□ -0.58
HDAC4-208ENST00000463007 ZNF761Q86XN6 746 aaPredicted RBP11.4□□□□□ -0.58
HDAC4-208ENST00000463007 LNX2Q8N448 690 aa11.4□□□□□ -0.58
HDAC4-208ENST00000463007 SMIM4Q8WVI0 70 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 119.2 ms