RNA–Protein interactions for RNA: ENST00000462815.5

PTPN7-204, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,147 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-204ENST00000462815 ALKBH3Q96Q83 286 aaPredicted RBP9.68□□□□□ -0.86
PTPN7-204ENST00000462815 DPY30Q9C005 99 aa9.68□□□□□ -0.86
PTPN7-204ENST00000462815 RLIMQ9NVW2 624 aa9.68□□□□□ -0.86
PTPN7-204ENST00000462815 FAM53CQ9NYF3 392 aa9.68□□□□□ -0.86
PTPN7-204ENST00000462815 CFAP73A6NFT4 308 aa9.67□□□□□ -0.86
PTPN7-204ENST00000462815 E9PBE3 544 aa9.67□□□□□ -0.86
PTPN7-204ENST00000462815 ZNF432O94892 652 aa9.67□□□□□ -0.86
PTPN7-204ENST00000462815 TGFAP01135 160 aa9.67□□□□□ -0.86
PTPN7-204ENST00000462815 GPIP06744 558 aa9.67□□□□□ -0.86
PTPN7-204ENST00000462815 CELA3BP08861 270 aa9.67□□□□□ -0.86
PTPN7-204ENST00000462815 OR4A8P0C604 315 aa9.67□□□□□ -0.86
PTPN7-204ENST00000462815 PRG2P13727 222 aa9.67□□□□□ -0.86
PTPN7-204ENST00000462815 CDH2P19022 906 aaPredicted RBP9.67□□□□□ -0.86
PTPN7-204ENST00000462815 IDH3GP51553 393 aaPredicted RBP9.67□□□□□ -0.86
PTPN7-204ENST00000462815 TUBA1BP68363 451 aa9.67□□□□□ -0.86
PTPN7-204ENST00000462815 TUBA4AP68366 448 aa9.67□□□□□ -0.86
PTPN7-204ENST00000462815 BNIP2Q12982 314 aa9.67□□□□□ -0.86
PTPN7-204ENST00000462815 RIN1Q13671 783 aa9.67□□□□□ -0.86
PTPN7-204ENST00000462815 MSMPQ1L6U9 139 aa9.67□□□□□ -0.86
PTPN7-204ENST00000462815 DPY19L1Q2PZI1 675 aa9.67□□□□□ -0.86
PTPN7-204ENST00000462815 FAM174BQ3ZCQ3 159 aa9.67□□□□□ -0.86
PTPN7-204ENST00000462815 OGFOD2Q6N063 350 aa9.67□□□□□ -0.86
PTPN7-204ENST00000462815 ZNF836Q6ZNA1 936 aa9.67□□□□□ -0.86
PTPN7-204ENST00000462815 TUBA1AQ71U36 451 aa9.67□□□□□ -0.86
PTPN7-204ENST00000462815 SPATA19Q7Z5L4 167 aa9.67□□□□□ -0.86
PTPN7-204ENST00000462815 MEX3DQ86XN8 651 aaKnown RBP9.67□□□□□ -0.86
PTPN7-204ENST00000462815 LRRC34Q8IZ02 419 aa9.67□□□□□ -0.86
PTPN7-204ENST00000462815 ZCCHC24Q8N2G6 241 aaKnown RBP9.67□□□□□ -0.86
PTPN7-204ENST00000462815 C3orf49Q96BT1 292 aa9.67□□□□□ -0.86
PTPN7-204ENST00000462815 ATP6V1G3Q96LB4 118 aa9.67□□□□□ -0.86
PTPN7-204ENST00000462815 ZNF317Q96PQ6 595 aaPredicted RBP9.67□□□□□ -0.86
PTPN7-204ENST00000462815 DOK1Q99704 481 aa9.67□□□□□ -0.86
PTPN7-204ENST00000462815 PTDSS2Q9BVG9 487 aa9.67□□□□□ -0.86
PTPN7-204ENST00000462815 RSPO3Q9BXY4 272 aaPredicted RBP9.67□□□□□ -0.86
PTPN7-204ENST00000462815 LINC00470Q9BZP3 86 aa9.67□□□□□ -0.86
PTPN7-204ENST00000462815 CENPHQ9H3R5 247 aa9.67□□□□□ -0.86
PTPN7-204ENST00000462815 ZNF442Q9H7R0 627 aa9.67□□□□□ -0.86
PTPN7-204ENST00000462815 SLC6A13Q9NSD5 602 aa9.67□□□□□ -0.86
PTPN7-204ENST00000462815 TMEM45AQ9NWC5 275 aa9.67□□□□□ -0.86
PTPN7-204ENST00000462815 B3GAT1Q9P2W7 334 aa9.67□□□□□ -0.86
PTPN7-204ENST00000462815 RPL36A-HNRNPH2H7BZ11 118 aa9.66□□□□□ -0.86
PTPN7-204ENST00000462815 DBIP07108 87 aaKnown RBP9.66□□□□□ -0.86
PTPN7-204ENST00000462815 GKN3PP0CG01 181 aa9.66□□□□□ -0.86
PTPN7-204ENST00000462815 ABCE1P61221 599 aaKnown RBP9.66□□□□□ -0.86
PTPN7-204ENST00000462815 UFM1P61960 85 aa9.66□□□□□ -0.86
PTPN7-204ENST00000462815 HPCAP84074 193 aa9.66□□□□□ -0.86
PTPN7-204ENST00000462815 EGR4Q05215 589 aa9.66□□□□□ -0.86
PTPN7-204ENST00000462815 GSTA3Q16772 222 aa9.66□□□□□ -0.86
PTPN7-204ENST00000462815 KLHL24Q6TFL4 600 aa9.66□□□□□ -0.86
PTPN7-204ENST00000462815 SLC46A3Q7Z3Q1 461 aa9.66□□□□□ -0.86
PTPN7-204ENST00000462815 GPAT4Q86UL3 456 aa9.66□□□□□ -0.86
PTPN7-204ENST00000462815 VRK2Q86Y07 508 aa9.66□□□□□ -0.86
PTPN7-204ENST00000462815 RFLNBQ8N5W9 214 aa9.66□□□□□ -0.86
PTPN7-204ENST00000462815 VRK1Q99986 396 aaPredicted RBP9.66□□□□□ -0.86
PTPN7-204ENST00000462815 MTHFD2LQ9H903 347 aaPredicted RBP9.66□□□□□ -0.86
PTPN7-204ENST00000462815 MEAF6Q9HAF1 191 aa9.66□□□□□ -0.86
PTPN7-204ENST00000462815 SEC14L4Q9UDX3 406 aa9.66□□□□□ -0.86
PTPN7-204ENST00000462815 PRDM4Q9UKN5 801 aa9.66□□□□□ -0.86
PTPN7-204ENST00000462815 A0A096LPE4 126 aa9.65□□□□□ -0.86
PTPN7-204ENST00000462815 IGHV2OR16-5A0A0B4J2B6 119 aa9.65□□□□□ -0.86
PTPN7-204ENST00000462815 A0A1W2PPZ6 126 aa9.65□□□□□ -0.86
PTPN7-204ENST00000462815 CCDC154A6NI56 674 aa9.65□□□□□ -0.86
PTPN7-204ENST00000462815 A8MVM7 634 aa9.65□□□□□ -0.86
PTPN7-204ENST00000462815 ZNF587BE7ETH6 402 aa9.65□□□□□ -0.86
PTPN7-204ENST00000462815 VAMP5O95183 116 aa9.65□□□□□ -0.86
PTPN7-204ENST00000462815 CRYAAP02489 173 aa9.65□□□□□ -0.86
PTPN7-204ENST00000462815 SERPINE1P05121 402 aa9.65□□□□□ -0.86
PTPN7-204ENST00000462815 ITGA2P17301 1181 aa9.65□□□□□ -0.86
PTPN7-204ENST00000462815 HNF1AP20823 631 aa9.65□□□□□ -0.86
PTPN7-204ENST00000462815 PAX7P23759 505 aa9.65□□□□□ -0.86
PTPN7-204ENST00000462815 THBS4P35443 961 aa9.65□□□□□ -0.86
PTPN7-204ENST00000462815 CHI3L1P36222 383 aaPredicted RBP9.65□□□□□ -0.86
PTPN7-204ENST00000462815 CLNS1AP54105 237 aaKnown RBP9.65□□□□□ -0.86
PTPN7-204ENST00000462815 CDH15P55291 814 aa9.65□□□□□ -0.86
PTPN7-204ENST00000462815 MAGOHP61326 146 aaKnown RBP9.65□□□□□ -0.86
PTPN7-204ENST00000462815 TXNL4AP83876 142 aaKnown RBP9.65□□□□□ -0.86
PTPN7-204ENST00000462815 SQLEQ14534 574 aa9.65□□□□□ -0.86
PTPN7-204ENST00000462815 TRIP10Q15642 601 aa9.65□□□□□ -0.86
PTPN7-204ENST00000462815 CHI3L2Q15782 390 aa9.65□□□□□ -0.86
PTPN7-204ENST00000462815 RNF220Q5VTB9 566 aa9.65□□□□□ -0.86
PTPN7-204ENST00000462815 C1orf140Q5VVS0 124 aa9.65□□□□□ -0.86
PTPN7-204ENST00000462815 ABHD12BQ7Z5M8 362 aaPredicted RBP9.65□□□□□ -0.86
PTPN7-204ENST00000462815 NUDCD3Q8IVD9 361 aa9.65□□□□□ -0.86
PTPN7-204ENST00000462815 CDK20Q8IZL9 346 aa9.65□□□□□ -0.86
PTPN7-204ENST00000462815 ZNF786Q8N393 782 aa9.65□□□□□ -0.86
PTPN7-204ENST00000462815 CLIP4Q8N3C7 705 aa9.65□□□□□ -0.86
PTPN7-204ENST00000462815 VPS37AQ8NEZ2 397 aa9.65□□□□□ -0.86
PTPN7-204ENST00000462815 ANKK1Q8NFD2 765 aa9.65□□□□□ -0.86
PTPN7-204ENST00000462815 SEMA6DQ8NFY4 1073 aa9.65□□□□□ -0.86
PTPN7-204ENST00000462815 HPS1Q92902 700 aa9.65□□□□□ -0.86
PTPN7-204ENST00000462815 ZNF837Q96EG3 531 aaPredicted RBP9.65□□□□□ -0.86
PTPN7-204ENST00000462815 ZNF75AQ96N20 296 aa9.65□□□□□ -0.86
PTPN7-204ENST00000462815 SSU72Q9NP77 194 aaKnown RBP9.65□□□□□ -0.86
PTPN7-204ENST00000462815 MED4Q9NPJ6 270 aa9.65□□□□□ -0.86
PTPN7-204ENST00000462815 AIG1Q9NVV5 245 aa9.65□□□□□ -0.86
PTPN7-204ENST00000462815 EPB41L3Q9Y2J2 1087 aaPredicted RBP9.65□□□□□ -0.86
PTPN7-204ENST00000462815 RAP2CQ9Y3L5 183 aa9.65□□□□□ -0.86
PTPN7-204ENST00000462815 DYSFO75923 2080 aa9.65□□□□□ -0.87
PTPN7-204ENST00000462815 HMGB1P1B2RPK0 211 aaPredicted RBP9.64□□□□□ -0.87
PTPN7-204ENST00000462815 hCG_2039718K7EN88 272 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms