RNA–Protein interactions for RNA: ENST00000462475.1

COL7A1-204, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 3

Gene COL7A1, Length 305 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-204ENST00000462475 CREB3L2Q70SY1 520 aa14.02□□□□□ -0.17
COL7A1-204ENST00000462475 TUBA1AQ71U36 451 aa14.02□□□□□ -0.17
COL7A1-204ENST00000462475 ABHD12BQ7Z5M8 362 aaPredicted RBP14.02□□□□□ -0.17
COL7A1-204ENST00000462475 EPHX4Q8IUS5 362 aa14.02□□□□□ -0.17
COL7A1-204ENST00000462475 CLIP4Q8N3C7 705 aa14.02□□□□□ -0.17
COL7A1-204ENST00000462475 ANKS4BQ8N8V4 417 aa14.02□□□□□ -0.17
COL7A1-204ENST00000462475 ANKRD42Q8N9B4 389 aa14.02□□□□□ -0.17
COL7A1-204ENST00000462475 GLB1L3Q8NCI6 653 aaPredicted RBP14.02□□□□□ -0.17
COL7A1-204ENST00000462475 SLC38A5Q8WUX1 472 aa14.02□□□□□ -0.17
COL7A1-204ENST00000462475 C3orf49Q96BT1 292 aa14.02□□□□□ -0.17
COL7A1-204ENST00000462475 SHARPINQ9H0F6 387 aa14.02□□□□□ -0.17
COL7A1-204ENST00000462475 SEC61A2Q9H9S3 476 aa14.02□□□□□ -0.17
COL7A1-204ENST00000462475 OBP2BQ9NPH6 170 aa14.02□□□□□ -0.17
COL7A1-204ENST00000462475 TMEM45AQ9NWC5 275 aa14.02□□□□□ -0.17
COL7A1-204ENST00000462475 LPAR3Q9UBY5 353 aa14.02□□□□□ -0.17
COL7A1-204ENST00000462475 SLC35F4A4IF30 521 aa14.01□□□□□ -0.17
COL7A1-204ENST00000462475 TMEM229AB2RXF0 380 aa14.01□□□□□ -0.17
COL7A1-204ENST00000462475 NR5A2O00482 541 aa14.01□□□□□ -0.17
COL7A1-204ENST00000462475 HDAC3O15379 428 aa14.01□□□□□ -0.17
COL7A1-204ENST00000462475 LMX1BO60663 402 aa14.01□□□□□ -0.17
COL7A1-204ENST00000462475 NPIPB7O75200 414 aa14.01□□□□□ -0.17
COL7A1-204ENST00000462475 TFPTP0C1Z6 253 aa14.01□□□□□ -0.17
COL7A1-204ENST00000462475 NCF2P19878 526 aaPredicted RBP14.01□□□□□ -0.17
COL7A1-204ENST00000462475 NR4A2P43354 598 aa14.01□□□□□ -0.17
COL7A1-204ENST00000462475 CRISP3P54108 245 aa14.01□□□□□ -0.17
COL7A1-204ENST00000462475 DSTNP60981 165 aa14.01□□□□□ -0.17
COL7A1-204ENST00000462475 CARTPTQ16568 116 aa14.01□□□□□ -0.17
COL7A1-204ENST00000462475 KRTAP24-1Q3LI83 254 aa14.01□□□□□ -0.17
COL7A1-204ENST00000462475 CEP85LQ5SZL2 805 aa14.01□□□□□ -0.17
COL7A1-204ENST00000462475 IL17RELQ6ZVW7 336 aa14.01□□□□□ -0.17
COL7A1-204ENST00000462475 SERPINA11Q86U17 422 aa14.01□□□□□ -0.17
COL7A1-204ENST00000462475 BCL2L2Q92843 193 aaPredicted RBP14.01□□□□□ -0.17
COL7A1-204ENST00000462475 VPS33AQ96AX1 596 aa14.01□□□□□ -0.17
COL7A1-204ENST00000462475 TMEM19Q96HH6 336 aa14.01□□□□□ -0.17
COL7A1-204ENST00000462475 PIMREGQ9BSJ6 248 aa14.01□□□□□ -0.17
COL7A1-204ENST00000462475 KATNB1Q9BVA0 655 aa14.01□□□□□ -0.17
COL7A1-204ENST00000462475 PRR14Q9BWN1 585 aa14.01□□□□□ -0.17
COL7A1-204ENST00000462475 NELFAQ9H3P2 528 aa14.01□□□□□ -0.17
COL7A1-204ENST00000462475 CHODLQ9H9P2 273 aa14.01□□□□□ -0.17
COL7A1-204ENST00000462475 CA10Q9NS85 328 aa14.01□□□□□ -0.17
COL7A1-204ENST00000462475 CALML5Q9NZT1 146 aa14.01□□□□□ -0.17
COL7A1-204ENST00000462475 ARFGEF3Q5TH69 2177 aa14□□□□□ -0.17
COL7A1-204ENST00000462475 YLPM1P49750 1951 aaKnown RBP14□□□□□ -0.17
COL7A1-204ENST00000462475 A0A096LPE4 126 aa14□□□□□ -0.17
COL7A1-204ENST00000462475 ARPC4-TTLL3A0A0A6YYG9 625 aa14□□□□□ -0.17
COL7A1-204ENST00000462475 IGHV4-61A0A0C4DH41 118 aa14□□□□□ -0.17
COL7A1-204ENST00000462475 A0A1W2PPZ6 126 aa14□□□□□ -0.17
COL7A1-204ENST00000462475 SNNO75324 88 aaPredicted RBP14□□□□□ -0.17
COL7A1-204ENST00000462475 VAMP5O95183 116 aa14□□□□□ -0.17
COL7A1-204ENST00000462475 CRYAAP02489 173 aa14□□□□□ -0.17
COL7A1-204ENST00000462475 CECR9P0C854 216 aa14□□□□□ -0.17
COL7A1-204ENST00000462475 KITP10721 976 aa14□□□□□ -0.17
COL7A1-204ENST00000462475 SERPINF1P36955 418 aa14□□□□□ -0.17
COL7A1-204ENST00000462475 GZMKP49863 264 aa14□□□□□ -0.17
COL7A1-204ENST00000462475 WDR4P57081 412 aaKnown RBP14□□□□□ -0.17
COL7A1-204ENST00000462475 UBE2NP61088 152 aaKnown RBP14□□□□□ -0.17
COL7A1-204ENST00000462475 HOXC5Q00444 222 aa14□□□□□ -0.17
COL7A1-204ENST00000462475 NAAAQ02083 359 aa14□□□□□ -0.17
COL7A1-204ENST00000462475 ADIPOQQ15848 244 aa14□□□□□ -0.17
COL7A1-204ENST00000462475 PDCD4Q53EL6 469 aaKnown RBP14□□□□□ -0.17
COL7A1-204ENST00000462475 NXNQ6DKJ4 435 aa14□□□□□ -0.17
COL7A1-204ENST00000462475 VHLLQ6RSH7 139 aa14□□□□□ -0.17
COL7A1-204ENST00000462475 SLC46A3Q7Z3Q1 461 aa14□□□□□ -0.17
COL7A1-204ENST00000462475 KDM8Q8N371 416 aa14□□□□□ -0.17
COL7A1-204ENST00000462475 MSI2Q96DH6 328 aaKnown RBP14□□□□□ -0.17
COL7A1-204ENST00000462475 VRK1Q99986 396 aaPredicted RBP14□□□□□ -0.17
COL7A1-204ENST00000462475 KCNS3Q9BQ31 491 aa14□□□□□ -0.17
COL7A1-204ENST00000462475 PTDSS2Q9BVG9 487 aa14□□□□□ -0.17
COL7A1-204ENST00000462475 TPT1P8Q9HAU6 139 aa14□□□□□ -0.17
COL7A1-204ENST00000462475 CRNNQ9UBG3 495 aaPredicted RBP14□□□□□ -0.17
COL7A1-204ENST00000462475 RASD1Q9Y272 281 aa14□□□□□ -0.17
COL7A1-204ENST00000462475 HEATR1Q9H583 2144 aaKnown RBP13.99□□□□□ -0.17
COL7A1-204ENST00000462475 A0A096LPI6 279 aa13.99□□□□□ -0.17
COL7A1-204ENST00000462475 LOC100289279A0A1B0GTE1 492 aa13.99□□□□□ -0.17
COL7A1-204ENST00000462475 TRPC5OSA6NMA1 111 aa13.99□□□□□ -0.17
COL7A1-204ENST00000462475 FTCDNL1E5RQL4 147 aa13.99□□□□□ -0.17
COL7A1-204ENST00000462475 NDUFS8O00217 210 aa13.99□□□□□ -0.17
COL7A1-204ENST00000462475 SLC22A3O75751 556 aa13.99□□□□□ -0.17
COL7A1-204ENST00000462475 AHSA1O95433 338 aa13.99□□□□□ -0.17
COL7A1-204ENST00000462475 ANP32DO95626 131 aa13.99□□□□□ -0.17
COL7A1-204ENST00000462475 IL6P05231 212 aa13.99□□□□□ -0.17
COL7A1-204ENST00000462475 OR4A8P0C604 315 aa13.99□□□□□ -0.17
COL7A1-204ENST00000462475 ZCCHC18P0CG32 403 aa13.99□□□□□ -0.17
COL7A1-204ENST00000462475 PNMTP11086 282 aa13.99□□□□□ -0.17
COL7A1-204ENST00000462475 IDO1P14902 403 aa13.99□□□□□ -0.17
COL7A1-204ENST00000462475 CALCRP30988 508 aa13.99□□□□□ -0.17
COL7A1-204ENST00000462475 SRSF2Q01130 221 aaKnown RBP13.99□□□□□ -0.17
COL7A1-204ENST00000462475 LARS2Q15031 903 aaKnown RBP13.99□□□□□ -0.17
COL7A1-204ENST00000462475 HHATQ5VTY9 493 aa13.99□□□□□ -0.17
COL7A1-204ENST00000462475 ATG16L1Q676U5 607 aa13.99□□□□□ -0.17
COL7A1-204ENST00000462475 FAM166AQ6J272 317 aa13.99□□□□□ -0.17
COL7A1-204ENST00000462475 ANKRD16Q6P6B7 361 aa13.99□□□□□ -0.17
COL7A1-204ENST00000462475 MAVSQ7Z434 540 aa13.99□□□□□ -0.17
COL7A1-204ENST00000462475 MYPOPQ86VE0 399 aaPredicted RBP13.99□□□□□ -0.17
COL7A1-204ENST00000462475 OR9I1Q8NGQ6 314 aa13.99□□□□□ -0.17
COL7A1-204ENST00000462475 MAGEE2Q8TD90 523 aaPredicted RBP13.99□□□□□ -0.17
COL7A1-204ENST00000462475 STK35Q8TDR2 534 aa13.99□□□□□ -0.17
COL7A1-204ENST00000462475 SLC25A36Q96CQ1 311 aa13.99□□□□□ -0.17
COL7A1-204ENST00000462475 FOXN4Q96NZ1 517 aa13.99□□□□□ -0.17
COL7A1-204ENST00000462475 SPATA9Q9BWV2 254 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms