RNA–Protein interactions for RNA: ENST00000462289.1

VPS36-202, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 544 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-202ENST00000462289 LACC1Q8IV20 430 aa5.13□□□□□ -1.59
VPS36-202ENST00000462289 MICU2Q8IYU8 434 aa5.13□□□□□ -1.59
VPS36-202ENST00000462289 ARHGAP24Q8N264 748 aa5.13□□□□□ -1.59
VPS36-202ENST00000462289 RPRMLQ8N4K4 120 aa5.13□□□□□ -1.59
VPS36-202ENST00000462289 GATSQ8NAP1 163 aa5.13□□□□□ -1.59
VPS36-202ENST00000462289 NAXEQ8NCW5 288 aa5.13□□□□□ -1.59
VPS36-202ENST00000462289 RBM15BQ8NDT2 890 aaKnown RBP5.13□□□□□ -1.59
VPS36-202ENST00000462289 OR2T12Q8NG77 320 aa5.13□□□□□ -1.59
VPS36-202ENST00000462289 OR4D11Q8NGI4 311 aa5.13□□□□□ -1.59
VPS36-202ENST00000462289 OR6S1Q8NH40 331 aa5.13□□□□□ -1.59
VPS36-202ENST00000462289 BCAS4Q8TDM0 211 aa5.13□□□□□ -1.59
VPS36-202ENST00000462289 SLC25A43Q8WUT9 341 aaPredicted RBP5.13□□□□□ -1.59
VPS36-202ENST00000462289 CFHR4Q92496 578 aa5.13□□□□□ -1.59
VPS36-202ENST00000462289 FBXW5Q969U6 566 aa5.13□□□□□ -1.59
VPS36-202ENST00000462289 C3orf49Q96BT1 292 aa5.13□□□□□ -1.59
VPS36-202ENST00000462289 SLC7A6OSQ96CW6 309 aaPredicted RBP5.13□□□□□ -1.59
VPS36-202ENST00000462289 RNF145Q96MT1 663 aa5.13□□□□□ -1.59
VPS36-202ENST00000462289 TUBA1CQ9BQE3 449 aa5.13□□□□□ -1.59
VPS36-202ENST00000462289 THUMPD3Q9BV44 507 aaKnown RBP5.13□□□□□ -1.59
VPS36-202ENST00000462289 SPATA5L1Q9BVQ7 753 aa5.13□□□□□ -1.59
VPS36-202ENST00000462289 FAM107BQ9H098 131 aa5.13□□□□□ -1.59
VPS36-202ENST00000462289 GORASP2Q9H8Y8 452 aa5.13□□□□□ -1.59
VPS36-202ENST00000462289 RNF122Q9H9V4 155 aa5.13□□□□□ -1.59
VPS36-202ENST00000462289 SPAG4Q9NPE6 437 aa5.13□□□□□ -1.59
VPS36-202ENST00000462289 FANCFQ9NPI8 374 aa5.13□□□□□ -1.59
VPS36-202ENST00000462289 PAQR5Q9NXK6 330 aaPredicted RBP5.13□□□□□ -1.59
VPS36-202ENST00000462289 GALNT8Q9NY28 637 aa5.13□□□□□ -1.59
VPS36-202ENST00000462289 TAS2R1Q9NYW7 299 aa5.13□□□□□ -1.59
VPS36-202ENST00000462289 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.13□□□□□ -1.59
VPS36-202ENST00000462289 TESQ9UGI8 421 aaKnown RBP5.13□□□□□ -1.59
VPS36-202ENST00000462289 OSGIN1Q9UJX0 560 aa5.13□□□□□ -1.59
VPS36-202ENST00000462289 USP22Q9UPT9 525 aa5.13□□□□□ -1.59
VPS36-202ENST00000462289 OSGIN2Q9Y236 505 aa5.13□□□□□ -1.59
VPS36-202ENST00000462289 ANGPT4Q9Y264 503 aa5.13□□□□□ -1.59
VPS36-202ENST00000462289 SLC6A5Q9Y345 797 aa5.13□□□□□ -1.59
VPS36-202ENST00000462289 ATP23Q9Y6H3 246 aa5.13□□□□□ -1.59
VPS36-202ENST00000462289 MAST4O15021 2626 aa5.13□□□□□ -1.59
VPS36-202ENST00000462289 ROS1P08922 2347 aa5.13□□□□□ -1.59
VPS36-202ENST00000462289 IGKV1D-42A0A075B6H8 117 aa5.12□□□□□ -1.59
VPS36-202ENST00000462289 IGKV3D-15A0A087WSY6 115 aa5.12□□□□□ -1.59
VPS36-202ENST00000462289 LOC102725191A0A1B0GVB3 256 aa5.12□□□□□ -1.59
VPS36-202ENST00000462289 ELOVL7A1L3X0 281 aa5.12□□□□□ -1.59
VPS36-202ENST00000462289 CCT8L1PA6NM43 557 aa5.12□□□□□ -1.59
VPS36-202ENST00000462289 FTCDNL1E5RQL4 147 aa5.12□□□□□ -1.59
VPS36-202ENST00000462289 NPIPA2E9PIF3 369 aa5.12□□□□□ -1.59
VPS36-202ENST00000462289 NPIPA3F8WFD2 350 aa5.12□□□□□ -1.59
VPS36-202ENST00000462289 AIM2O14862 343 aa5.12□□□□□ -1.59
VPS36-202ENST00000462289 LRRTM2O43300 516 aa5.12□□□□□ -1.59
VPS36-202ENST00000462289 SERPINB7O75635 380 aa5.12□□□□□ -1.59
VPS36-202ENST00000462289 RCBTB2O95199 551 aa5.12□□□□□ -1.59
VPS36-202ENST00000462289 PMS2P2O95744 297 aa5.12□□□□□ -1.59
VPS36-202ENST00000462289 CGAP01215 116 aa5.12□□□□□ -1.59
VPS36-202ENST00000462289 HPGDP15428 266 aa5.12□□□□□ -1.59
VPS36-202ENST00000462289 NAT1P18440 290 aa5.12□□□□□ -1.59
VPS36-202ENST00000462289 HK1P19367 917 aa5.12□□□□□ -1.59
VPS36-202ENST00000462289 GGT1P19440 569 aa5.12□□□□□ -1.59
VPS36-202ENST00000462289 CALB2P22676 271 aa5.12□□□□□ -1.59
VPS36-202ENST00000462289 RFX3P48380 749 aa5.12□□□□□ -1.59
VPS36-202ENST00000462289 NUDT2P50583 147 aa5.12□□□□□ -1.59
VPS36-202ENST00000462289 ZNF41P51814 821 aaPredicted RBP5.12□□□□□ -1.59
VPS36-202ENST00000462289 MNAT1P51948 309 aa5.12□□□□□ -1.59
VPS36-202ENST00000462289 SLC16A1P53985 500 aa5.12□□□□□ -1.59
VPS36-202ENST00000462289 SUMO1P63165 101 aaKnown RBP5.12□□□□□ -1.59
VPS36-202ENST00000462289 LIPEQ05469 1076 aa5.12□□□□□ -1.59
VPS36-202ENST00000462289 BNIP1Q12981 228 aa5.12□□□□□ -1.59
VPS36-202ENST00000462289 ART3Q13508 389 aa5.12□□□□□ -1.59
VPS36-202ENST00000462289 CEACAM7Q14002 265 aa5.12□□□□□ -1.59
VPS36-202ENST00000462289 PDK3Q15120 406 aa5.12□□□□□ -1.59
VPS36-202ENST00000462289 SF3B4Q15427 424 aaKnown RBP eCLIP5.12□□□□□ -1.59
VPS36-202ENST00000462289 CYP51A1Q16850 503 aa5.12□□□□□ -1.59
VPS36-202ENST00000462289 MMEL1Q495T6 779 aa5.12□□□□□ -1.59
VPS36-202ENST00000462289 ZNF311Q5JNZ3 666 aa5.12□□□□□ -1.59
VPS36-202ENST00000462289 C1orf185Q5T7R7 199 aa5.12□□□□□ -1.59
VPS36-202ENST00000462289 WLSQ5T9L3 541 aa5.12□□□□□ -1.59
VPS36-202ENST00000462289 ABLIM2Q6H8Q1 611 aa5.12□□□□□ -1.59
VPS36-202ENST00000462289 C3orf33Q6P1S2 294 aa5.12□□□□□ -1.59
VPS36-202ENST00000462289 ZNF613Q6PF04 617 aa5.12□□□□□ -1.59
VPS36-202ENST00000462289 XKRXQ6PP77 449 aa5.12□□□□□ -1.59
VPS36-202ENST00000462289 B3GNT6Q6ZMB0 384 aa5.12□□□□□ -1.59
VPS36-202ENST00000462289 ZNF550Q7Z398 422 aa5.12□□□□□ -1.59
VPS36-202ENST00000462289 KRT73Q86Y46 540 aa5.12□□□□□ -1.59
VPS36-202ENST00000462289 EID3Q8N140 333 aa5.12□□□□□ -1.59
VPS36-202ENST00000462289 ZNF808Q8N4W9 903 aaPredicted RBP5.12□□□□□ -1.59
VPS36-202ENST00000462289 OR14L1PQ8NHC6 308 aa5.12□□□□□ -1.59
VPS36-202ENST00000462289 LILRB4Q8NHJ6 448 aa5.12□□□□□ -1.59
VPS36-202ENST00000462289 RNF128Q8TEB7 428 aa5.12□□□□□ -1.59
VPS36-202ENST00000462289 SSC4DQ8WTU2 575 aa5.12□□□□□ -1.59
VPS36-202ENST00000462289 RASSF5Q8WWW0 418 aa5.12□□□□□ -1.59
VPS36-202ENST00000462289 LIPHQ8WWY8 451 aa5.12□□□□□ -1.59
VPS36-202ENST00000462289 TMEM234Q8WY98 164 aa5.12□□□□□ -1.59
VPS36-202ENST00000462289 SLC38A4Q969I6 547 aa5.12□□□□□ -1.59
VPS36-202ENST00000462289 SLC41A3Q96GZ6 507 aa5.12□□□□□ -1.59
VPS36-202ENST00000462289 SH3YL1Q96HL8 342 aaPredicted RBP5.12□□□□□ -1.59
VPS36-202ENST00000462289 NSL1Q96IY1 281 aa5.12□□□□□ -1.59
VPS36-202ENST00000462289 C7orf34Q96L11 122 aa5.12□□□□□ -1.59
VPS36-202ENST00000462289 KLHL15Q96M94 604 aa5.12□□□□□ -1.59
VPS36-202ENST00000462289 JSRP1Q96MG2 331 aaPredicted RBP5.12□□□□□ -1.59
VPS36-202ENST00000462289 SFXN2Q96NB2 322 aa5.12□□□□□ -1.59
VPS36-202ENST00000462289 ZNF607Q96SK3 696 aa5.12□□□□□ -1.59
VPS36-202ENST00000462289 ECSITQ9BQ95 431 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms