RNA–Protein interactions for RNA: ENST00000462258.1

SF3A3-204, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 2

Gene SF3A3, Length 527 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-204ENST00000462258 SLC7A10Q9NS82 523 aa8.95□□□□□ -0.98
SF3A3-204ENST00000462258 FGFR1OP2Q9NVK5 253 aa8.95□□□□□ -0.98
SF3A3-204ENST00000462258 ZNF446Q9NWS9 450 aa8.95□□□□□ -0.98
SF3A3-204ENST00000462258 LAMP3Q9UQV4 416 aa8.95□□□□□ -0.98
SF3A3-204ENST00000462258 RASD1Q9Y272 281 aa8.95□□□□□ -0.98
SF3A3-204ENST00000462258 IGKV1D-42A0A075B6H8 117 aa8.94□□□□□ -0.98
SF3A3-204ENST00000462258 A0A0B4J2E0 115 aa8.94□□□□□ -0.98
SF3A3-204ENST00000462258 A0A1B0GX12 115 aa8.94□□□□□ -0.98
SF3A3-204ENST00000462258 FZD7O75084 574 aa8.94□□□□□ -0.98
SF3A3-204ENST00000462258 OPN1SWP03999 348 aa8.94□□□□□ -0.98
SF3A3-204ENST00000462258 PAX1P15863 534 aa8.94□□□□□ -0.98
SF3A3-204ENST00000462258 MPGP29372 298 aa8.94□□□□□ -0.98
SF3A3-204ENST00000462258 ZNF83P51522 516 aa8.94□□□□□ -0.98
SF3A3-204ENST00000462258 TGFBR3Q03167 851 aa8.94□□□□□ -0.98
SF3A3-204ENST00000462258 DMTNQ08495 405 aa8.94□□□□□ -0.98
SF3A3-204ENST00000462258 SPOCK1Q08629 439 aa8.94□□□□□ -0.98
SF3A3-204ENST00000462258 FAM69AQ5T7M9 428 aa8.94□□□□□ -0.98
SF3A3-204ENST00000462258 METTL21CQ5VZV1 264 aa8.94□□□□□ -0.98
SF3A3-204ENST00000462258 FAM91A1Q658Y4 838 aa8.94□□□□□ -0.98
SF3A3-204ENST00000462258 TMEM225Q6GV28 225 aa8.94□□□□□ -0.98
SF3A3-204ENST00000462258 CGB2Q6NT52 195 aa8.94□□□□□ -0.98
SF3A3-204ENST00000462258 KLHL17Q6TDP4 642 aa8.94□□□□□ -0.98
SF3A3-204ENST00000462258 C5orf46Q6UWT4 87 aa8.94□□□□□ -0.98
SF3A3-204ENST00000462258 PRSS57Q6UWY2 283 aa8.94□□□□□ -0.98
SF3A3-204ENST00000462258 TMEM108Q6UXF1 575 aa8.94□□□□□ -0.98
SF3A3-204ENST00000462258 NET1Q7Z628 596 aaPredicted RBP8.94□□□□□ -0.98
SF3A3-204ENST00000462258 BIVMQ86UB2 503 aa8.94□□□□□ -0.98
SF3A3-204ENST00000462258 RANBP3LQ86VV4 465 aaPredicted RBP8.94□□□□□ -0.98
SF3A3-204ENST00000462258 ZIC4Q8N9L1 334 aa8.94□□□□□ -0.98
SF3A3-204ENST00000462258 POMGNT2Q8NAT1 580 aa8.94□□□□□ -0.98
SF3A3-204ENST00000462258 SMYD1Q8NB12 490 aa8.94□□□□□ -0.98
SF3A3-204ENST00000462258 DNAJA4Q8WW22 397 aaPredicted RBP8.94□□□□□ -0.98
SF3A3-204ENST00000462258 SLC38A4Q969I6 547 aa8.94□□□□□ -0.98
SF3A3-204ENST00000462258 SLC25A36Q96CQ1 311 aa8.94□□□□□ -0.98
SF3A3-204ENST00000462258 COX4I2Q96KJ9 171 aa8.94□□□□□ -0.98
SF3A3-204ENST00000462258 KAT8Q9H7Z6 458 aaKnown RBP8.94□□□□□ -0.98
SF3A3-204ENST00000462258 EVA1AQ9H8M9 152 aa8.94□□□□□ -0.98
SF3A3-204ENST00000462258 ZNF701Q9NV72 531 aaPredicted RBP8.94□□□□□ -0.98
SF3A3-204ENST00000462258 SELENONQ9NZV5 590 aa8.94□□□□□ -0.98
SF3A3-204ENST00000462258 SEC14L4Q9UDX3 406 aa8.94□□□□□ -0.98
SF3A3-204ENST00000462258 AMDHD2Q9Y303 409 aa8.94□□□□□ -0.98
SF3A3-204ENST00000462258 MAGED1Q9Y5V3 778 aaPredicted RBP8.94□□□□□ -0.98
SF3A3-204ENST00000462258 SLC25A15Q9Y619 301 aa8.94□□□□□ -0.98
SF3A3-204ENST00000462258 PLCE1Q9P212 2302 aa8.94□□□□□ -0.98
SF3A3-204ENST00000462258 NSD1Q96L73 2696 aaPredicted RBP8.94□□□□□ -0.98
SF3A3-204ENST00000462258 USF3Q68DE3 2245 aa8.93□□□□□ -0.98
SF3A3-204ENST00000462258 TRAV36DV7A0A075B6V5 113 aa8.93□□□□□ -0.98
SF3A3-204ENST00000462258 SHISA9B4DS77 424 aa8.93□□□□□ -0.98
SF3A3-204ENST00000462258 ZNF587BE7ETH6 402 aa8.93□□□□□ -0.98
SF3A3-204ENST00000462258 H7C1Q1 480 aa8.93□□□□□ -0.98
SF3A3-204ENST00000462258 M0R082 166 aa8.93□□□□□ -0.98
SF3A3-204ENST00000462258 M0R1B8 84 aa8.93□□□□□ -0.98
SF3A3-204ENST00000462258 M0R3H8 397 aa8.93□□□□□ -0.98
SF3A3-204ENST00000462258 AIM2O14862 343 aa8.93□□□□□ -0.98
SF3A3-204ENST00000462258 OR2T1O43869 369 aa8.93□□□□□ -0.98
SF3A3-204ENST00000462258 KRT33AO76009 404 aa8.93□□□□□ -0.98
SF3A3-204ENST00000462258 MFN2O95140 757 aa8.93□□□□□ -0.98
SF3A3-204ENST00000462258 SOD3P08294 240 aa8.93□□□□□ -0.98
SF3A3-204ENST00000462258 INHBBP09529 407 aa8.93□□□□□ -0.98
SF3A3-204ENST00000462258 DANCRP0C864 163 aa8.93□□□□□ -0.98
SF3A3-204ENST00000462258 PTNP21246 168 aa8.93□□□□□ -0.98
SF3A3-204ENST00000462258 PCGF2P35227 344 aa8.93□□□□□ -0.98
SF3A3-204ENST00000462258 SELENOPP49908 381 aa8.93□□□□□ -0.98
SF3A3-204ENST00000462258 ARFIP2P53365 341 aa8.93□□□□□ -0.98
SF3A3-204ENST00000462258 ATP5J2P56134 94 aa8.93□□□□□ -0.98
SF3A3-204ENST00000462258 SLC25A3Q00325 362 aa8.93□□□□□ -0.98
SF3A3-204ENST00000462258 OR1Q1Q15612 314 aa8.93□□□□□ -0.98
SF3A3-204ENST00000462258 REP15Q6BDI9 236 aa8.93□□□□□ -0.98
SF3A3-204ENST00000462258 NIPAL3Q6P499 406 aa8.93□□□□□ -0.98
SF3A3-204ENST00000462258 ULK3Q6PHR2 472 aa8.93□□□□□ -0.98
SF3A3-204ENST00000462258 KLHL24Q6TFL4 600 aa8.93□□□□□ -0.98
SF3A3-204ENST00000462258 CREB3L2Q70SY1 520 aa8.93□□□□□ -0.98
SF3A3-204ENST00000462258 ABHD12BQ7Z5M8 362 aaPredicted RBP8.93□□□□□ -0.98
SF3A3-204ENST00000462258 EPHX4Q8IUS5 362 aa8.93□□□□□ -0.98
SF3A3-204ENST00000462258 SLC30A8Q8IWU4 369 aa8.93□□□□□ -0.98
SF3A3-204ENST00000462258 ZNF417Q8TAU3 575 aa8.93□□□□□ -0.98
SF3A3-204ENST00000462258 RNF217Q8TC41 542 aa8.93□□□□□ -0.98
SF3A3-204ENST00000462258 SMAP2Q8WU79 429 aaPredicted RBP8.93□□□□□ -0.98
SF3A3-204ENST00000462258 SLC47A1Q96FL8 570 aa8.93□□□□□ -0.98
SF3A3-204ENST00000462258 MUS81Q96NY9 551 aa8.93□□□□□ -0.98
SF3A3-204ENST00000462258 ZNF587Q96SQ5 575 aaPredicted RBP8.93□□□□□ -0.98
SF3A3-204ENST00000462258 ARHGDIGQ99819 225 aa8.93□□□□□ -0.98
SF3A3-204ENST00000462258 PRR14Q9BWN1 585 aa8.93□□□□□ -0.98
SF3A3-204ENST00000462258 GSX1Q9H4S2 264 aaPredicted RBP8.93□□□□□ -0.98
SF3A3-204ENST00000462258 ALG2Q9H553 416 aa8.93□□□□□ -0.98
SF3A3-204ENST00000462258 TMEM27Q9HBJ8 222 aa8.93□□□□□ -0.98
SF3A3-204ENST00000462258 SLC17A5Q9NRA2 495 aa8.93□□□□□ -0.98
SF3A3-204ENST00000462258 MRGBPQ9NV56 204 aa8.93□□□□□ -0.98
SF3A3-204ENST00000462258 KLHL14Q9P2G3 628 aa8.93□□□□□ -0.98
SF3A3-204ENST00000462258 A0A087WUJ7 227 aa8.92□□□□□ -0.98
SF3A3-204ENST00000462258 TRIM64A6NGJ6 449 aa8.92□□□□□ -0.98
SF3A3-204ENST00000462258 TRIM64BA6NI03 449 aa8.92□□□□□ -0.98
SF3A3-204ENST00000462258 OR6C65A6NJZ3 312 aa8.92□□□□□ -0.98
SF3A3-204ENST00000462258 BBIP1A8MTZ0 92 aa8.92□□□□□ -0.98
SF3A3-204ENST00000462258 FXYD1O00168 92 aa8.92□□□□□ -0.98
SF3A3-204ENST00000462258 FBP2O00757 339 aa8.92□□□□□ -0.98
SF3A3-204ENST00000462258 TPST2O60704 377 aa8.92□□□□□ -0.98
SF3A3-204ENST00000462258 VIMP08670 466 aaKnown RBP8.92□□□□□ -0.98
SF3A3-204ENST00000462258 ZNF43P17038 809 aa8.92□□□□□ -0.98
SF3A3-204ENST00000462258 CDH2P19022 906 aaPredicted RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms