RNA–Protein interactions for RNA: ENST00000461574.1

BRCA1-206, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 726 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-206ENST00000461574 MRPL46Q9H2W6 279 aaKnown RBP4.36□□□□□ -1.71
BRCA1-206ENST00000461574 CDC42EP4Q9H3Q1 356 aaKnown RBP4.36□□□□□ -1.71
BRCA1-206ENST00000461574 TPK1Q9H3S4 243 aa4.36□□□□□ -1.71
BRCA1-206ENST00000461574 PIF1Q9H611 641 aa4.36□□□□□ -1.71
BRCA1-206ENST00000461574 SLC17A5Q9NRA2 495 aa4.36□□□□□ -1.71
BRCA1-206ENST00000461574 DDX28Q9NUL7 540 aaKnown RBP4.36□□□□□ -1.71
BRCA1-206ENST00000461574 PARPBPQ9NWS1 579 aa4.36□□□□□ -1.71
BRCA1-206ENST00000461574 PFDN2Q9UHV9 154 aa4.36□□□□□ -1.71
BRCA1-206ENST00000461574 ICAM5Q9UMF0 924 aa4.36□□□□□ -1.71
BRCA1-206ENST00000461574 SLC9A8Q9Y2E8 581 aa4.36□□□□□ -1.71
BRCA1-206ENST00000461574 STK38LQ9Y2H1 464 aa4.36□□□□□ -1.71
BRCA1-206ENST00000461574 POLR3HQ9Y535 204 aaPredicted RBP4.36□□□□□ -1.71
BRCA1-206ENST00000461574 DMRT1Q9Y5R6 373 aa4.36□□□□□ -1.71
BRCA1-206ENST00000461574 PRKDCP78527 4128 aaKnown RBP4.35□□□□□ -1.71
BRCA1-206ENST00000461574 LOC105371242A0A075B767 164 aa4.35□□□□□ -1.71
BRCA1-206ENST00000461574 IGKV3D-15A0A087WSY6 115 aa4.35□□□□□ -1.71
BRCA1-206ENST00000461574 IGHV1-18A0A0C4DH31 117 aa4.35□□□□□ -1.71
BRCA1-206ENST00000461574 ZNF716A6NP11 495 aa4.35□□□□□ -1.71
BRCA1-206ENST00000461574 TFP02787 698 aa4.35□□□□□ -1.71
BRCA1-206ENST00000461574 ENO1P06733 434 aaKnown RBP4.35□□□□□ -1.71
BRCA1-206ENST00000461574 GSTA1P08263 222 aa4.35□□□□□ -1.71
BRCA1-206ENST00000461574 IFI6P09912 130 aa4.35□□□□□ -1.71
BRCA1-206ENST00000461574 SAGP10523 405 aaPredicted RBP4.35□□□□□ -1.71
BRCA1-206ENST00000461574 NPR2P20594 1047 aa4.35□□□□□ -1.71
BRCA1-206ENST00000461574 MPGP29372 298 aa4.35□□□□□ -1.71
BRCA1-206ENST00000461574 HSD17B3P37058 310 aa4.35□□□□□ -1.71
BRCA1-206ENST00000461574 GPR6P46095 362 aaPredicted RBP4.35□□□□□ -1.71
BRCA1-206ENST00000461574 PLTPP55058 493 aa4.35□□□□□ -1.71
BRCA1-206ENST00000461574 FOXG1P55316 489 aaPredicted RBP4.35□□□□□ -1.71
BRCA1-206ENST00000461574 OR2B6P58173 313 aa4.35□□□□□ -1.71
BRCA1-206ENST00000461574 MRPS25P82663 173 aaKnown RBP4.35□□□□□ -1.71
BRCA1-206ENST00000461574 SLC25A3Q00325 362 aa4.35□□□□□ -1.71
BRCA1-206ENST00000461574 GUCY2DQ02846 1103 aa4.35□□□□□ -1.71
BRCA1-206ENST00000461574 CAV1Q03135 178 aa4.35□□□□□ -1.71
BRCA1-206ENST00000461574 LASP1Q14847 261 aaKnown RBP4.35□□□□□ -1.71
BRCA1-206ENST00000461574 PDK3Q15120 406 aa4.35□□□□□ -1.71
BRCA1-206ENST00000461574 EFNB3Q15768 340 aa4.35□□□□□ -1.71
BRCA1-206ENST00000461574 ADIPOQQ15848 244 aa4.35□□□□□ -1.71
BRCA1-206ENST00000461574 ADRM1Q16186 407 aa4.35□□□□□ -1.71
BRCA1-206ENST00000461574 SPDYE7PQ495Y7 208 aa4.35□□□□□ -1.71
BRCA1-206ENST00000461574 HIKESHIQ53FT3 197 aa4.35□□□□□ -1.71
BRCA1-206ENST00000461574 ZNF311Q5JNZ3 666 aa4.35□□□□□ -1.71
BRCA1-206ENST00000461574 DCST2Q5T1A1 773 aa4.35□□□□□ -1.71
BRCA1-206ENST00000461574 C1QTNF12Q5T7M4 302 aa4.35□□□□□ -1.71
BRCA1-206ENST00000461574 FAM71E1Q6IPT2 247 aa4.35□□□□□ -1.71
BRCA1-206ENST00000461574 TMPPEQ6ZT21 453 aa4.35□□□□□ -1.71
BRCA1-206ENST00000461574 MTDHQ86UE4 582 aaKnown RBP4.35□□□□□ -1.71
BRCA1-206ENST00000461574 LRRC8AQ8IWT6 810 aa4.35□□□□□ -1.71
BRCA1-206ENST00000461574 GSPT2Q8IYD1 628 aaKnown RBP4.35□□□□□ -1.71
BRCA1-206ENST00000461574 ZCCHC24Q8N2G6 241 aaKnown RBP4.35□□□□□ -1.71
BRCA1-206ENST00000461574 WDR31Q8NA23 367 aa4.35□□□□□ -1.71
BRCA1-206ENST00000461574 OR4F15Q8NGB8 312 aa4.35□□□□□ -1.71
BRCA1-206ENST00000461574 OR14K1Q8NGZ2 314 aa4.35□□□□□ -1.71
BRCA1-206ENST00000461574 OR5W2Q8NH69 310 aa4.35□□□□□ -1.71
BRCA1-206ENST00000461574 CLDND2Q8NHS1 167 aa4.35□□□□□ -1.71
BRCA1-206ENST00000461574 ZNF563Q8TA94 476 aa4.35□□□□□ -1.71
BRCA1-206ENST00000461574 GPR119Q8TDV5 335 aa4.35□□□□□ -1.71
BRCA1-206ENST00000461574 ST8SIA1Q92185 356 aa4.35□□□□□ -1.71
BRCA1-206ENST00000461574 PMM1Q92871 262 aa4.35□□□□□ -1.71
BRCA1-206ENST00000461574 CIDECQ96AQ7 238 aaPredicted RBP4.35□□□□□ -1.71
BRCA1-206ENST00000461574 PPCDCQ96CD2 204 aa4.35□□□□□ -1.71
BRCA1-206ENST00000461574 ARL5BQ96KC2 179 aa4.35□□□□□ -1.71
BRCA1-206ENST00000461574 ANKRD27Q96NW4 1050 aa4.35□□□□□ -1.71
BRCA1-206ENST00000461574 KCNA7Q96RP8 456 aa4.35□□□□□ -1.71
BRCA1-206ENST00000461574 ZNF382Q96SR6 550 aa4.35□□□□□ -1.71
BRCA1-206ENST00000461574 SLC6A7Q99884 636 aa4.35□□□□□ -1.71
BRCA1-206ENST00000461574 MRPL57Q9BQC6 102 aaKnown RBP4.35□□□□□ -1.71
BRCA1-206ENST00000461574 ERP44Q9BS26 406 aa4.35□□□□□ -1.71
BRCA1-206ENST00000461574 THUMPD3Q9BV44 507 aaKnown RBP4.35□□□□□ -1.71
BRCA1-206ENST00000461574 KATNB1Q9BVA0 655 aa4.35□□□□□ -1.71
BRCA1-206ENST00000461574 PLK3Q9H4B4 646 aa4.35□□□□□ -1.71
BRCA1-206ENST00000461574 SLC7A10Q9NS82 523 aa4.35□□□□□ -1.71
BRCA1-206ENST00000461574 ZCCHC3Q9NUD5 404 aaKnown RBP4.35□□□□□ -1.71
BRCA1-206ENST00000461574 AURKAIP1Q9NWT8 199 aaPredicted RBP4.35□□□□□ -1.71
BRCA1-206ENST00000461574 TAS2R7Q9NYW3 318 aa4.35□□□□□ -1.71
BRCA1-206ENST00000461574 SH3BP4Q9P0V3 963 aa4.35□□□□□ -1.71
BRCA1-206ENST00000461574 FAF1Q9UNN5 650 aaPredicted RBP4.35□□□□□ -1.71
BRCA1-206ENST00000461574 UTP11Q9Y3A2 253 aaKnown RBP4.35□□□□□ -1.71
BRCA1-206ENST00000461574 DTNAQ9Y4J8 743 aa4.35□□□□□ -1.71
BRCA1-206ENST00000461574 SPEF1Q9Y4P9 236 aa4.35□□□□□ -1.71
BRCA1-206ENST00000461574 PPIAL4AQ9Y536 164 aa4.35□□□□□ -1.71
BRCA1-206ENST00000461574 TIMM22Q9Y584 194 aa4.35□□□□□ -1.71
BRCA1-206ENST00000461574 TNFRSF18Q9Y5U5 241 aa4.35□□□□□ -1.71
BRCA1-206ENST00000461574 PTGDR2Q9Y5Y4 395 aa4.35□□□□□ -1.71
BRCA1-206ENST00000461574 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.34□□□□□ -1.71
BRCA1-206ENST00000461574 A0A0G2JMP0 313 aa4.34□□□□□ -1.71
BRCA1-206ENST00000461574 A0A0X1KG70 313 aa4.34□□□□□ -1.71
BRCA1-206ENST00000461574 LYNX1G3V0Z9 82 aa4.34□□□□□ -1.71
BRCA1-206ENST00000461574 PIP5K1BO14986 540 aa4.34□□□□□ -1.71
BRCA1-206ENST00000461574 ZSCAN12O43309 604 aa4.34□□□□□ -1.71
BRCA1-206ENST00000461574 PPIHO43447 177 aaKnown RBP4.34□□□□□ -1.71
BRCA1-206ENST00000461574 AKAP10O43572 662 aa4.34□□□□□ -1.71
BRCA1-206ENST00000461574 DNPH1O43598 174 aa4.34□□□□□ -1.71
BRCA1-206ENST00000461574 EIF4E2O60573 245 aaKnown RBP4.34□□□□□ -1.71
BRCA1-206ENST00000461574 SEC22BO75396 215 aa4.34□□□□□ -1.71
BRCA1-206ENST00000461574 RSL1D1O76021 490 aaKnown RBP4.34□□□□□ -1.71
BRCA1-206ENST00000461574 PMS2P2O95744 297 aa4.34□□□□□ -1.71
BRCA1-206ENST00000461574 CSTAP01040 98 aa4.34□□□□□ -1.71
BRCA1-206ENST00000461574 AMY2AP04746 511 aa4.34□□□□□ -1.71
BRCA1-206ENST00000461574 KRT16P08779 473 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms