RNA–Protein interactions for RNA: ENST00000460960.1

NCK1-202, Transcript of NCK adaptor protein 1, humanhuman

TSL 2

Gene NCK1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCK1-202ENST00000460960 OR52E4Q8NGH9 312 aa13.04□□□□□ -0.32
NCK1-202ENST00000460960 SLC35B4Q969S0 331 aa13.04□□□□□ -0.32
NCK1-202ENST00000460960 FAM162AQ96A26 154 aa13.04□□□□□ -0.32
NCK1-202ENST00000460960 PLPPR2Q96GM1 343 aa13.04□□□□□ -0.32
NCK1-202ENST00000460960 KLHL15Q96M94 604 aa13.04□□□□□ -0.32
NCK1-202ENST00000460960 MCHR1Q99705 422 aa13.04□□□□□ -0.32
NCK1-202ENST00000460960 PRRG4Q9BZD6 226 aa13.04□□□□□ -0.32
NCK1-202ENST00000460960 ARMC7Q9H6L4 198 aa13.04□□□□□ -0.32
NCK1-202ENST00000460960 YAE1D1Q9NRH1 226 aa13.04□□□□□ -0.32
NCK1-202ENST00000460960 ZNF701Q9NV72 531 aaPredicted RBP13.04□□□□□ -0.32
NCK1-202ENST00000460960 NDE1Q9NXR1 346 aa13.04□□□□□ -0.32
NCK1-202ENST00000460960 CHRNA9Q9UGM1 479 aa13.04□□□□□ -0.32
NCK1-202ENST00000460960 SLC13A4Q9UKG4 626 aa13.04□□□□□ -0.32
NCK1-202ENST00000460960 LAMP3Q9UQV4 416 aa13.04□□□□□ -0.32
NCK1-202ENST00000460960 V9GYQ6 96 aa13.04□□□□□ -0.32
NCK1-202ENST00000460960 ABCA1O95477 2261 aa13.04□□□□□ -0.32
NCK1-202ENST00000460960 IGKV1D-42A0A075B6H8 117 aa13.03□□□□□ -0.32
NCK1-202ENST00000460960 CPSF4LA6NMK7 179 aaKnown RBP13.03□□□□□ -0.32
NCK1-202ENST00000460960 LINC01387J3KSC0 135 aa13.03□□□□□ -0.32
NCK1-202ENST00000460960 HS3ST1O14792 307 aa13.03□□□□□ -0.32
NCK1-202ENST00000460960 ADAMDEC1O15204 470 aa13.03□□□□□ -0.32
NCK1-202ENST00000460960 AQP8O94778 261 aa13.03□□□□□ -0.32
NCK1-202ENST00000460960 PLGP00747 810 aaPredicted RBP13.03□□□□□ -0.32
NCK1-202ENST00000460960 CGAP01215 116 aa13.03□□□□□ -0.32
NCK1-202ENST00000460960 THBDP07204 575 aa13.03□□□□□ -0.32
NCK1-202ENST00000460960 C8BP07358 591 aa13.03□□□□□ -0.32
NCK1-202ENST00000460960 CD8BP10966 210 aa13.03□□□□□ -0.32
NCK1-202ENST00000460960 APOBEC1P41238 236 aaKnown RBP13.03□□□□□ -0.32
NCK1-202ENST00000460960 SELENOWP63302 87 aa13.03□□□□□ -0.32
NCK1-202ENST00000460960 ENTPD8Q5MY95 495 aa13.03□□□□□ -0.32
NCK1-202ENST00000460960 HBMQ6B0K9 141 aa13.03□□□□□ -0.32
NCK1-202ENST00000460960 C3orf33Q6P1S2 294 aa13.03□□□□□ -0.32
NCK1-202ENST00000460960 OR2V1Q8NHB1 315 aa13.03□□□□□ -0.32
NCK1-202ENST00000460960 AKAP1Q92667 903 aaKnown RBP eCLIP13.03□□□□□ -0.32
NCK1-202ENST00000460960 HSH2DQ96JZ2 352 aa13.03□□□□□ -0.32
NCK1-202ENST00000460960 OR5B2Q96R09 309 aa13.03□□□□□ -0.32
NCK1-202ENST00000460960 THTPAQ9BU02 230 aa13.03□□□□□ -0.32
NCK1-202ENST00000460960 C1orf21Q9H246 121 aa13.03□□□□□ -0.32
NCK1-202ENST00000460960 RNF122Q9H9V4 155 aa13.03□□□□□ -0.32
NCK1-202ENST00000460960 TESQ9UGI8 421 aaKnown RBP13.03□□□□□ -0.32
NCK1-202ENST00000460960 CLEC4AQ9UMR7 237 aa13.03□□□□□ -0.32
NCK1-202ENST00000460960 MXRA5Q9NR99 2828 aa13.02□□□□□ -0.33
NCK1-202ENST00000460960 IGHV3-15A0A0B4J1V0 119 aa13.02□□□□□ -0.33
NCK1-202ENST00000460960 A0A0B4J2E0 115 aa13.02□□□□□ -0.33
NCK1-202ENST00000460960 A0A1B0GX12 115 aa13.02□□□□□ -0.33
NCK1-202ENST00000460960 KLF4O43474 513 aa13.02□□□□□ -0.33
NCK1-202ENST00000460960 TFPIP10646 304 aa13.02□□□□□ -0.33
NCK1-202ENST00000460960 IMPDH2P12268 514 aa13.02□□□□□ -0.33
NCK1-202ENST00000460960 PAX1P15863 534 aa13.02□□□□□ -0.33
NCK1-202ENST00000460960 ME2P23368 584 aa13.02□□□□□ -0.33
NCK1-202ENST00000460960 YAP1P46937 504 aaKnown RBP13.02□□□□□ -0.33
NCK1-202ENST00000460960 CDH12P55289 794 aa13.02□□□□□ -0.33
NCK1-202ENST00000460960 CTBP2P56545 445 aa13.02□□□□□ -0.33
NCK1-202ENST00000460960 RPS3AP61247 264 aaKnown RBP13.02□□□□□ -0.33
NCK1-202ENST00000460960 COPZ1P61923 177 aa13.02□□□□□ -0.33
NCK1-202ENST00000460960 RPS4XP62701 263 aaKnown RBP13.02□□□□□ -0.33
NCK1-202ENST00000460960 SYT14P1Q58G82 188 aa13.02□□□□□ -0.33
NCK1-202ENST00000460960 CYP2R1Q6VVX0 501 aa13.02□□□□□ -0.33
NCK1-202ENST00000460960 DEF8Q6ZN54 512 aa13.02□□□□□ -0.33
NCK1-202ENST00000460960 ESPNLQ6ZVH7 1005 aa13.02□□□□□ -0.33
NCK1-202ENST00000460960 LSMEM1Q8N8F7 131 aa13.02□□□□□ -0.33
NCK1-202ENST00000460960 BHLHE22Q8NFJ8 381 aaPredicted RBP13.02□□□□□ -0.33
NCK1-202ENST00000460960 TMEM158Q8WZ71 300 aa13.02□□□□□ -0.33
NCK1-202ENST00000460960 ROBO4Q8WZ75 1007 aa13.02□□□□□ -0.33
NCK1-202ENST00000460960 PROX1Q92786 737 aa13.02□□□□□ -0.33
NCK1-202ENST00000460960 OSTF1Q92882 214 aa13.02□□□□□ -0.33
NCK1-202ENST00000460960 GTPBP3Q969Y2 492 aaKnown RBP13.02□□□□□ -0.33
NCK1-202ENST00000460960 CCDC124Q96CT7 223 aaKnown RBP13.02□□□□□ -0.33
NCK1-202ENST00000460960 REG4Q9BYZ8 158 aa13.02□□□□□ -0.33
NCK1-202ENST00000460960 AMBRA1Q9C0C7 1298 aa13.02□□□□□ -0.33
NCK1-202ENST00000460960 DCAF13Q9NV06 445 aaKnown RBP13.02□□□□□ -0.33
NCK1-202ENST00000460960 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.02□□□□□ -0.33
NCK1-202ENST00000460960 BAG5Q9UL15 447 aa13.02□□□□□ -0.33
NCK1-202ENST00000460960 EMC9Q9Y3B6 208 aa13.02□□□□□ -0.33
NCK1-202ENST00000460960 ZNF175Q9Y473 711 aa13.02□□□□□ -0.33
NCK1-202ENST00000460960 CR1P17927 2039 aa13.01□□□□□ -0.33
NCK1-202ENST00000460960 ZNF814B7Z6K7 855 aa13.01□□□□□ -0.33
NCK1-202ENST00000460960 J3KTA2 159 aa13.01□□□□□ -0.33
NCK1-202ENST00000460960 GYG2O15488 501 aa13.01□□□□□ -0.33
NCK1-202ENST00000460960 PRKD3O94806 890 aa13.01□□□□□ -0.33
NCK1-202ENST00000460960 IFNA14P01570 189 aa13.01□□□□□ -0.33
NCK1-202ENST00000460960 UQCRBP14927 111 aa13.01□□□□□ -0.33
NCK1-202ENST00000460960 PPP3CBP16298 524 aa13.01□□□□□ -0.33
NCK1-202ENST00000460960 NCALDP61601 193 aa13.01□□□□□ -0.33
NCK1-202ENST00000460960 EGR4Q05215 589 aa13.01□□□□□ -0.33
NCK1-202ENST00000460960 ALG10BQ5I7T1 473 aa13.01□□□□□ -0.33
NCK1-202ENST00000460960 FAM214BQ7L5A3 538 aa13.01□□□□□ -0.33
NCK1-202ENST00000460960 RANBP3LQ86VV4 465 aaPredicted RBP13.01□□□□□ -0.33
NCK1-202ENST00000460960 ZNF611Q8N823 705 aa13.01□□□□□ -0.33
NCK1-202ENST00000460960 ADAMTS16Q8TE57 1224 aa13.01□□□□□ -0.33
NCK1-202ENST00000460960 RASSF5Q8WWW0 418 aa13.01□□□□□ -0.33
NCK1-202ENST00000460960 IGFBPL1Q8WX77 278 aa13.01□□□□□ -0.33
NCK1-202ENST00000460960 TRMT61AQ96FX7 289 aaKnown RBP13.01□□□□□ -0.33
NCK1-202ENST00000460960 BTBD10Q9BSF8 475 aa13.01□□□□□ -0.33
NCK1-202ENST00000460960 CADM1Q9BY67 442 aaKnown RBP13.01□□□□□ -0.33
NCK1-202ENST00000460960 TRIM2Q9C040 744 aa13.01□□□□□ -0.33
NCK1-202ENST00000460960 ACTR6Q9GZN1 396 aa13.01□□□□□ -0.33
NCK1-202ENST00000460960 GORASP2Q9H8Y8 452 aa13.01□□□□□ -0.33
NCK1-202ENST00000460960 ADPRHL2Q9NX46 363 aa13.01□□□□□ -0.33
NCK1-202ENST00000460960 PRPF19Q9UMS4 504 aaKnown RBP13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms