RNA–Protein interactions for RNA: ENST00000460696.1

NPHP4-204, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-204ENST00000460696 ZNF717Q9BY31 904 aaPredicted RBP10.71□□□□□ -0.69
NPHP4-204ENST00000460696 MMP17Q9ULZ9 603 aa10.71□□□□□ -0.69
NPHP4-204ENST00000460696 MGAT4AQ9UM21 535 aa10.71□□□□□ -0.69
NPHP4-204ENST00000460696 TRAV18A0A075B6X5 111 aa10.71□□□□□ -0.7
NPHP4-204ENST00000460696 DCDC2BA2VCK2 349 aa10.71□□□□□ -0.7
NPHP4-204ENST00000460696 PRAMEF27A3QJZ7 478 aa10.71□□□□□ -0.7
NPHP4-204ENST00000460696 NOTOA8MTQ0 251 aa10.71□□□□□ -0.7
NPHP4-204ENST00000460696 I3L521 148 aa10.71□□□□□ -0.7
NPHP4-204ENST00000460696 CELA2BP08218 269 aaPredicted RBP10.71□□□□□ -0.7
NPHP4-204ENST00000460696 SYPP08247 313 aa10.71□□□□□ -0.7
NPHP4-204ENST00000460696 HSD11B1P28845 292 aa10.71□□□□□ -0.7
NPHP4-204ENST00000460696 LCN1P31025 176 aa10.71□□□□□ -0.7
NPHP4-204ENST00000460696 HTR3AP46098 478 aa10.71□□□□□ -0.7
NPHP4-204ENST00000460696 SLC6A9P48067 706 aa10.71□□□□□ -0.7
NPHP4-204ENST00000460696 MTNR1BP49286 362 aa10.71□□□□□ -0.7
NPHP4-204ENST00000460696 CDC20Q12834 499 aa10.71□□□□□ -0.7
NPHP4-204ENST00000460696 FGFBP1Q14512 234 aa10.71□□□□□ -0.7
NPHP4-204ENST00000460696 KLHL26Q53HC5 615 aa10.71□□□□□ -0.7
NPHP4-204ENST00000460696 TMEM225Q6GV28 225 aa10.71□□□□□ -0.7
NPHP4-204ENST00000460696 VASH1Q7L8A9 365 aaPredicted RBP10.71□□□□□ -0.7
NPHP4-204ENST00000460696 PRSS45Q7RTY3 260 aa10.71□□□□□ -0.7
NPHP4-204ENST00000460696 DPCDQ9BVM2 203 aaPredicted RBP10.71□□□□□ -0.7
NPHP4-204ENST00000460696 NOX4Q9NPH5 578 aa10.71□□□□□ -0.7
NPHP4-204ENST00000460696 FBXL4Q9UKA2 621 aa10.71□□□□□ -0.7
NPHP4-204ENST00000460696 DHDHQ9UQ10 334 aa10.71□□□□□ -0.7
NPHP4-204ENST00000460696 A0A0B4J203 849 aa10.7□□□□□ -0.7
NPHP4-204ENST00000460696 L7N2F9 121 aa10.7□□□□□ -0.7
NPHP4-204ENST00000460696 GABRG2P18507 467 aa10.7□□□□□ -0.7
NPHP4-204ENST00000460696 SRP9P49458 86 aaKnown RBP10.7□□□□□ -0.7
NPHP4-204ENST00000460696 EMDP50402 254 aa10.7□□□□□ -0.7
NPHP4-204ENST00000460696 GALEQ14376 348 aa10.7□□□□□ -0.7
NPHP4-204ENST00000460696 CARD17Q5XLA6 110 aa10.7□□□□□ -0.7
NPHP4-204ENST00000460696 TMEM92Q6UXU6 159 aa10.7□□□□□ -0.7
NPHP4-204ENST00000460696 UBQLNLQ8IYU4 475 aa10.7□□□□□ -0.7
NPHP4-204ENST00000460696 MORN4Q8NDC4 146 aa10.7□□□□□ -0.7
NPHP4-204ENST00000460696 C16orf52Q8NHV5 167 aa10.7□□□□□ -0.7
NPHP4-204ENST00000460696 KLHL15Q96M94 604 aa10.7□□□□□ -0.7
NPHP4-204ENST00000460696 SYT4Q9H2B2 425 aa10.7□□□□□ -0.7
NPHP4-204ENST00000460696 QPCTLQ9NXS2 382 aa10.7□□□□□ -0.7
NPHP4-204ENST00000460696 MGAT4CQ9UBM8 478 aa10.7□□□□□ -0.7
NPHP4-204ENST00000460696 WNT16Q9UBV4 365 aa10.7□□□□□ -0.7
NPHP4-204ENST00000460696 RCE1Q9Y256 329 aa10.7□□□□□ -0.7
NPHP4-204ENST00000460696 HS3ST3A1Q9Y663 406 aa10.7□□□□□ -0.7
NPHP4-204ENST00000460696 V9GY05 133 aa10.7□□□□□ -0.7
NPHP4-204ENST00000460696 NLRC5Q86WI3 1866 aa10.7□□□□□ -0.7
NPHP4-204ENST00000460696 DOK2O60496 412 aa10.7□□□□□ -0.7
NPHP4-204ENST00000460696 ZNF20P17024 532 aa10.7□□□□□ -0.7
NPHP4-204ENST00000460696 E2F1Q01094 437 aa10.7□□□□□ -0.7
NPHP4-204ENST00000460696 FAM69BQ5VUD6 431 aa10.7□□□□□ -0.7
NPHP4-204ENST00000460696 MRM1Q6IN84 353 aaKnown RBP10.7□□□□□ -0.7
NPHP4-204ENST00000460696 METAP1DQ6UB28 335 aaPredicted RBP10.7□□□□□ -0.7
NPHP4-204ENST00000460696 LYPD4Q6UWN0 246 aa10.7□□□□□ -0.7
NPHP4-204ENST00000460696 TPRA1Q86W33 373 aa10.7□□□□□ -0.7
NPHP4-204ENST00000460696 LSRQ86X29 649 aaPredicted RBP10.7□□□□□ -0.7
NPHP4-204ENST00000460696 SPEM1Q8N4L4 309 aa10.7□□□□□ -0.7
NPHP4-204ENST00000460696 KIAA1958Q8N8K9 716 aa10.7□□□□□ -0.7
NPHP4-204ENST00000460696 LGALS14Q8TCE9 139 aa10.7□□□□□ -0.7
NPHP4-204ENST00000460696 FBLIM1Q8WUP2 373 aa10.7□□□□□ -0.7
NPHP4-204ENST00000460696 SLC7A6Q92536 515 aa10.7□□□□□ -0.7
NPHP4-204ENST00000460696 CREB3L1Q96BA8 519 aa10.7□□□□□ -0.7
NPHP4-204ENST00000460696 LMF2Q9BU23 707 aaKnown RBP10.7□□□□□ -0.7
NPHP4-204ENST00000460696 IFT46Q9NQC8 304 aa10.7□□□□□ -0.7
NPHP4-204ENST00000460696 WDR87Q6ZQQ6 2873 aa10.7□□□□□ -0.7
NPHP4-204ENST00000460696 A0A1W2PPL8 197 aa10.7□□□□□ -0.7
NPHP4-204ENST00000460696 TLX3O43711 291 aaPredicted RBP10.7□□□□□ -0.7
NPHP4-204ENST00000460696 DNAJB6O75190 326 aa10.7□□□□□ -0.7
NPHP4-204ENST00000460696 ARSBP15848 533 aa10.7□□□□□ -0.7
NPHP4-204ENST00000460696 ZNF24P17028 368 aa10.7□□□□□ -0.7
NPHP4-204ENST00000460696 VAMP1P23763 118 aa10.7□□□□□ -0.7
NPHP4-204ENST00000460696 RIDAP52758 137 aaKnown RBP10.7□□□□□ -0.7
NPHP4-204ENST00000460696 GFERP55789 205 aa10.7□□□□□ -0.7
NPHP4-204ENST00000460696 KIRREL2Q6UWL6 708 aa10.7□□□□□ -0.7
NPHP4-204ENST00000460696 OR2L13Q8N349 312 aa10.7□□□□□ -0.7
NPHP4-204ENST00000460696 IL22RA1Q8N6P7 574 aa10.7□□□□□ -0.7
NPHP4-204ENST00000460696 HYLS1Q96M11 299 aa10.7□□□□□ -0.7
NPHP4-204ENST00000460696 INTS14Q96SY0 518 aa10.7□□□□□ -0.7
NPHP4-204ENST00000460696 ZNF304Q9HCX3 659 aa10.7□□□□□ -0.7
NPHP4-204ENST00000460696 KLHL9Q9P2J3 617 aa10.7□□□□□ -0.7
NPHP4-204ENST00000460696 H2BFMP0C1H6 154 aa10.69□□□□□ -0.7
NPHP4-204ENST00000460696 CT62P0C5K7 136 aa10.69□□□□□ -0.7
NPHP4-204ENST00000460696 CD1CP29017 333 aa10.69□□□□□ -0.7
NPHP4-204ENST00000460696 AVPR2P30518 371 aa10.69□□□□□ -0.7
NPHP4-204ENST00000460696 ZNF41P51814 821 aaPredicted RBP10.69□□□□□ -0.7
NPHP4-204ENST00000460696 PRKXP51817 358 aa10.69□□□□□ -0.7
NPHP4-204ENST00000460696 ARFRP1Q13795 201 aa10.69□□□□□ -0.7
NPHP4-204ENST00000460696 TMEM201Q5SNT2 666 aa10.69□□□□□ -0.7
NPHP4-204ENST00000460696 GLT8D1Q68CQ7 371 aa10.69□□□□□ -0.7
NPHP4-204ENST00000460696 OR7E24Q6IFN5 339 aa10.69□□□□□ -0.7
NPHP4-204ENST00000460696 RPL22L1Q6P5R6 122 aaKnown RBP10.69□□□□□ -0.7
NPHP4-204ENST00000460696 THSD4Q6ZMP0 1018 aa10.69□□□□□ -0.7
NPHP4-204ENST00000460696 KDM8Q8N371 416 aa10.69□□□□□ -0.7
NPHP4-204ENST00000460696 SYNPRQ8TBG9 265 aa10.69□□□□□ -0.7
NPHP4-204ENST00000460696 OR51J1Q9H342 316 aa10.69□□□□□ -0.7
NPHP4-204ENST00000460696 ACOXLQ9NUZ1 547 aa10.69□□□□□ -0.7
NPHP4-204ENST00000460696 ARHGEF17Q96PE2 2063 aaPredicted RBP10.69□□□□□ -0.7
NPHP4-204ENST00000460696 HEATR5BQ9P2D3 2071 aa10.69□□□□□ -0.7
NPHP4-204ENST00000460696 C2orf72A6NCS6 295 aa10.69□□□□□ -0.7
NPHP4-204ENST00000460696 HOXB9P17482 250 aaPredicted RBP10.69□□□□□ -0.7
NPHP4-204ENST00000460696 PEBP1P30086 187 aaKnown RBP10.69□□□□□ -0.7
NPHP4-204ENST00000460696 KIR2DL1P43626 348 aaPredicted RBP10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms