RNA–Protein interactions for RNA: ENST00000456948.5

CBX3-204, Transcript of chromobox 3, humanhuman

TSL 5

Gene CBX3, Length 1,068 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-204ENST00000456948 TMEM43Q9BTV4 400 aa20.49■□□□□ 0.87
CBX3-204ENST00000456948 ASPNQ9BXN1 380 aa20.49■□□□□ 0.87
CBX3-204ENST00000456948 RSPO3Q9BXY4 272 aaPredicted RBP20.49■□□□□ 0.87
CBX3-204ENST00000456948 ESRP2Q9H6T0 727 aaKnown RBP20.49■□□□□ 0.87
CBX3-204ENST00000456948 PLEKHF2Q9H8W4 249 aa20.49■□□□□ 0.87
CBX3-204ENST00000456948 TAS2R16Q9NYV7 291 aa20.49■□□□□ 0.87
CBX3-204ENST00000456948 SH3GLB1Q9Y371 365 aa20.49■□□□□ 0.87
CBX3-204ENST00000456948 TRAPPC13A5PLN9 417 aa20.48■□□□□ 0.87
CBX3-204ENST00000456948 FTCDNL1E5RQL4 147 aa20.48■□□□□ 0.87
CBX3-204ENST00000456948 CHP2O43745 196 aa20.48■□□□□ 0.87
CBX3-204ENST00000456948 LYZL6O75951 148 aa20.48■□□□□ 0.87
CBX3-204ENST00000456948 THBDP07204 575 aa20.48■□□□□ 0.87
CBX3-204ENST00000456948 NUDT2P50583 147 aa20.48■□□□□ 0.87
CBX3-204ENST00000456948 IL1RL1Q01638 556 aa20.48■□□□□ 0.87
CBX3-204ENST00000456948 FAPQ12884 760 aa20.48■□□□□ 0.87
CBX3-204ENST00000456948 C1DQ13901 141 aaKnown RBP20.48■□□□□ 0.87
CBX3-204ENST00000456948 STK11Q15831 433 aa20.48■□□□□ 0.87
CBX3-204ENST00000456948 TIMM23BQ5SRD1 257 aa20.48■□□□□ 0.87
CBX3-204ENST00000456948 PAMR1Q6UXH9 720 aa20.48■□□□□ 0.87
CBX3-204ENST00000456948 H1FNTQ75WM6 255 aaPredicted RBP20.48■□□□□ 0.87
CBX3-204ENST00000456948 ZC3HAV1Q7Z2W4 902 aaKnown RBP20.48■□□□□ 0.87
CBX3-204ENST00000456948 GPR32P1Q8NGA4 272 aa20.48■□□□□ 0.87
CBX3-204ENST00000456948 NRGNQ92686 78 aa20.48■□□□□ 0.87
CBX3-204ENST00000456948 TAAR8Q969N4 342 aa20.48■□□□□ 0.87
CBX3-204ENST00000456948 MPP4Q96JB8 637 aa20.48■□□□□ 0.87
CBX3-204ENST00000456948 POLR2J2Q9GZM3 115 aaKnown RBP20.48■□□□□ 0.87
CBX3-204ENST00000456948 POLR2J3Q9H1A7 115 aaKnown RBP20.48■□□□□ 0.87
CBX3-204ENST00000456948 MALT1Q9UDY8 824 aa20.48■□□□□ 0.87
CBX3-204ENST00000456948 CPSF4LA6NMK7 179 aaKnown RBP20.47■□□□□ 0.87
CBX3-204ENST00000456948 AKAP8O43823 692 aaKnown RBP20.47■□□□□ 0.87
CBX3-204ENST00000456948 IGHV3-9P01782 118 aa20.47■□□□□ 0.87
CBX3-204ENST00000456948 NQO1P15559 274 aaKnown RBP20.47■□□□□ 0.87
CBX3-204ENST00000456948 COX5AP20674 150 aa20.47■□□□□ 0.87
CBX3-204ENST00000456948 IGHV1-2P23083 117 aa20.47■□□□□ 0.87
CBX3-204ENST00000456948 KDELR2P33947 212 aa20.47■□□□□ 0.87
CBX3-204ENST00000456948 LRRC23Q53EV4 343 aaPredicted RBP20.47■□□□□ 0.87
CBX3-204ENST00000456948 TTC33Q6PID6 262 aaPredicted RBP20.47■□□□□ 0.87
CBX3-204ENST00000456948 CREB3L2Q70SY1 520 aa20.47■□□□□ 0.87
CBX3-204ENST00000456948 ZNF433Q8N7K0 673 aaPredicted RBP20.47■□□□□ 0.87
CBX3-204ENST00000456948 ADAMTS16Q8TE57 1224 aa20.47■□□□□ 0.87
CBX3-204ENST00000456948 OXGR1Q96P68 337 aa20.47■□□□□ 0.87
CBX3-204ENST00000456948 PTDSS2Q9BVG9 487 aa20.47■□□□□ 0.87
CBX3-204ENST00000456948 PCDHAC1Q9H158 963 aa20.47■□□□□ 0.87
CBX3-204ENST00000456948 MYLK2Q9H1R3 596 aa20.47■□□□□ 0.87
CBX3-204ENST00000456948 ARL2BPQ9Y2Y0 163 aa20.47■□□□□ 0.87
CBX3-204ENST00000456948 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP20.46■□□□□ 0.87
CBX3-204ENST00000456948 TPST2O60704 377 aa20.46■□□□□ 0.87
CBX3-204ENST00000456948 DCTN3O75935 186 aa20.46■□□□□ 0.87
CBX3-204ENST00000456948 MT-ATP6P00846 226 aa20.46■□□□□ 0.87
CBX3-204ENST00000456948 HOXC12P31275 282 aa20.46■□□□□ 0.87
CBX3-204ENST00000456948 IST1P53990 364 aa20.46■□□□□ 0.87
CBX3-204ENST00000456948 GYS2P54840 703 aa20.46■□□□□ 0.87
CBX3-204ENST00000456948 LIPEQ05469 1076 aa20.46■□□□□ 0.87
CBX3-204ENST00000456948 PPA1Q15181 289 aa20.46■□□□□ 0.87
CBX3-204ENST00000456948 TSC22D1Q15714 1073 aa20.46■□□□□ 0.87
CBX3-204ENST00000456948 TAB1Q15750 504 aa20.46■□□□□ 0.87
CBX3-204ENST00000456948 C1QTNF12Q5T7M4 302 aa20.46■□□□□ 0.87
CBX3-204ENST00000456948 TREML1Q86YW5 311 aa20.46■□□□□ 0.87
CBX3-204ENST00000456948 SLC15A3Q8IY34 581 aa20.46■□□□□ 0.87
CBX3-204ENST00000456948 SCAIQ8N9R8 606 aa20.46■□□□□ 0.87
CBX3-204ENST00000456948 PLPPR2Q96GM1 343 aa20.46■□□□□ 0.87
CBX3-204ENST00000456948 LRRC37BQ96QE4 947 aa20.46■□□□□ 0.87
CBX3-204ENST00000456948 SLCO5A1Q9H2Y9 848 aa20.46■□□□□ 0.87
CBX3-204ENST00000456948 PLEKHA6Q9Y2H5 1048 aa20.46■□□□□ 0.87
CBX3-204ENST00000456948 AKAP9Q99996 3911 aa20.46■□□□□ 0.87
CBX3-204ENST00000456948 KLF4O43474 513 aa20.45■□□□□ 0.86
CBX3-204ENST00000456948 GMNNO75496 209 aa20.45■□□□□ 0.86
CBX3-204ENST00000456948 GRPRP30550 384 aa20.45■□□□□ 0.86
CBX3-204ENST00000456948 ART1P52961 327 aa20.45■□□□□ 0.86
CBX3-204ENST00000456948 TAS2R41P59536 307 aa20.45■□□□□ 0.86
CBX3-204ENST00000456948 CYBRD1Q53TN4 286 aa20.45■□□□□ 0.86
CBX3-204ENST00000456948 C22orf34Q6ZV56 151 aa20.45■□□□□ 0.86
CBX3-204ENST00000456948 CARM1Q86X55 608 aa20.45■□□□□ 0.86
CBX3-204ENST00000456948 ADPRHL1Q8NDY3 354 aa20.45■□□□□ 0.86
CBX3-204ENST00000456948 TPD52L3Q96J77 140 aa20.45■□□□□ 0.86
CBX3-204ENST00000456948 ZNF385AQ96PM9 386 aaKnown RBP20.45■□□□□ 0.86
CBX3-204ENST00000456948 WFDC6Q9BQY6 131 aa20.45■□□□□ 0.86
CBX3-204ENST00000456948 SLC19A3Q9BZV2 496 aa20.45■□□□□ 0.86
CBX3-204ENST00000456948 ALG2Q9H553 416 aa20.45■□□□□ 0.86
CBX3-204ENST00000456948 CCM2LQ9NUG4 571 aaPredicted RBP20.45■□□□□ 0.86
CBX3-204ENST00000456948 CMTM6Q9NX76 183 aa20.45■□□□□ 0.86
CBX3-204ENST00000456948 IGKV1D-42A0A075B6H8 117 aa20.44■□□□□ 0.86
CBX3-204ENST00000456948 LOC102725191A0A1B0GVB3 256 aa20.44■□□□□ 0.86
CBX3-204ENST00000456948 OR5H1A6NKK0 313 aa20.44■□□□□ 0.86
CBX3-204ENST00000456948 M0R082 166 aa20.44■□□□□ 0.86
CBX3-204ENST00000456948 OR6A2O95222 327 aa20.44■□□□□ 0.86
CBX3-204ENST00000456948 MPGP29372 298 aa20.44■□□□□ 0.86
CBX3-204ENST00000456948 P2RY4P51582 365 aa20.44■□□□□ 0.86
CBX3-204ENST00000456948 SLC7A2P52569 658 aa20.44■□□□□ 0.86
CBX3-204ENST00000456948 SELENOWP63302 87 aa20.44■□□□□ 0.86
CBX3-204ENST00000456948 PMS2P3Q13401 168 aa20.44■□□□□ 0.86
CBX3-204ENST00000456948 C20orf204Q6ZNR8 217 aa20.44■□□□□ 0.86
CBX3-204ENST00000456948 P3H2Q8IVL5 708 aa20.44■□□□□ 0.86
CBX3-204ENST00000456948 UEVLDQ8IX04 471 aa20.44■□□□□ 0.86
CBX3-204ENST00000456948 ZIC4Q8N9L1 334 aa20.44■□□□□ 0.86
CBX3-204ENST00000456948 C1orf162Q8NEQ5 155 aaPredicted RBP20.44■□□□□ 0.86
CBX3-204ENST00000456948 ZNF417Q8TAU3 575 aa20.44■□□□□ 0.86
CBX3-204ENST00000456948 PIGTQ969N2 578 aa20.44■□□□□ 0.86
CBX3-204ENST00000456948 MBD6Q96DN6 1003 aa20.44■□□□□ 0.86
CBX3-204ENST00000456948 ZNF587Q96SQ5 575 aaPredicted RBP20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms