RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 IMPA2O14732 288 aa16.79■□□□□ 0.28
SEMA3B-209ENST00000456560 ORC5O43913 435 aa16.79■□□□□ 0.28
SEMA3B-209ENST00000456560 TFPIP10646 304 aa16.79■□□□□ 0.28
SEMA3B-209ENST00000456560 SPI1P17947 270 aa16.79■□□□□ 0.28
SEMA3B-209ENST00000456560 RAB3BP20337 219 aa16.79■□□□□ 0.28
SEMA3B-209ENST00000456560 GDI2P50395 445 aaKnown RBP16.79■□□□□ 0.28
SEMA3B-209ENST00000456560 RPS11P62280 158 aaKnown RBP eCLIP16.79■□□□□ 0.28
SEMA3B-209ENST00000456560 ERVK-25P63136 954 aa16.79■□□□□ 0.28
SEMA3B-209ENST00000456560 SIRPAP78324 504 aa16.79■□□□□ 0.28
SEMA3B-209ENST00000456560 CD226Q15762 336 aa16.79■□□□□ 0.28
SEMA3B-209ENST00000456560 WBP2NLQ6ICG8 309 aa16.79■□□□□ 0.28
SEMA3B-209ENST00000456560 PTCRAQ6ISU1 281 aaPredicted RBP16.79■□□□□ 0.28
SEMA3B-209ENST00000456560 ATG4DQ86TL0 474 aaPredicted RBP16.79■□□□□ 0.28
SEMA3B-209ENST00000456560 ZNF321PQ8N8H1 164 aa16.79■□□□□ 0.28
SEMA3B-209ENST00000456560 MOSPD2Q8NHP6 518 aa16.79■□□□□ 0.28
SEMA3B-209ENST00000456560 TRMT10AQ8TBZ6 339 aaKnown RBP16.79■□□□□ 0.28
SEMA3B-209ENST00000456560 LIPHQ8WWY8 451 aa16.79■□□□□ 0.28
SEMA3B-209ENST00000456560 CCDC86Q9H6F5 360 aaKnown RBP16.79■□□□□ 0.28
SEMA3B-209ENST00000456560 UBQLN4Q9NRR5 601 aa16.79■□□□□ 0.28
SEMA3B-209ENST00000456560 COPS3Q9UNS2 423 aa16.79■□□□□ 0.28
SEMA3B-209ENST00000456560 LANCL1O43813 399 aa16.78■□□□□ 0.28
SEMA3B-209ENST00000456560 IL33O95760 270 aa16.78■□□□□ 0.28
SEMA3B-209ENST00000456560 TALDO1P37837 337 aa16.78■□□□□ 0.28
SEMA3B-209ENST00000456560 OR3A3P47888 321 aa16.78■□□□□ 0.28
SEMA3B-209ENST00000456560 PITPNBP48739 271 aa16.78■□□□□ 0.28
SEMA3B-209ENST00000456560 SLC37A1P57057 533 aa16.78■□□□□ 0.28
SEMA3B-209ENST00000456560 PRPS1P60891 318 aa16.78■□□□□ 0.28
SEMA3B-209ENST00000456560 RRAS2P62070 204 aaPredicted RBP16.78■□□□□ 0.28
SEMA3B-209ENST00000456560 MRPL28Q13084 256 aaKnown RBP16.78■□□□□ 0.28
SEMA3B-209ENST00000456560 SKP2Q13309 424 aa16.78■□□□□ 0.28
SEMA3B-209ENST00000456560 RPL22L1Q6P5R6 122 aaKnown RBP16.78■□□□□ 0.28
SEMA3B-209ENST00000456560 GATSQ8NAP1 163 aa16.78■□□□□ 0.28
SEMA3B-209ENST00000456560 OR5H6Q8NGV6 325 aa16.78■□□□□ 0.28
SEMA3B-209ENST00000456560 SUN5Q8TC36 379 aa16.78■□□□□ 0.28
SEMA3B-209ENST00000456560 THAP7Q9BT49 309 aaPredicted RBP16.78■□□□□ 0.28
SEMA3B-209ENST00000456560 WACQ9BTA9 647 aa16.78■□□□□ 0.28
SEMA3B-209ENST00000456560 GTPBP2Q9BX10 602 aaKnown RBP16.78■□□□□ 0.28
SEMA3B-209ENST00000456560 MFRPQ9BY79 579 aa16.78■□□□□ 0.28
SEMA3B-209ENST00000456560 HSPB11Q9Y547 144 aa16.78■□□□□ 0.28
SEMA3B-209ENST00000456560 SELENOFO60613 162 aa16.78■□□□□ 0.28
SEMA3B-209ENST00000456560 SLC43A1O75387 559 aa16.78■□□□□ 0.28
SEMA3B-209ENST00000456560 PAHP00439 452 aa16.78■□□□□ 0.28
SEMA3B-209ENST00000456560 PNMTP11086 282 aa16.78■□□□□ 0.28
SEMA3B-209ENST00000456560 ARSBP15848 533 aa16.78■□□□□ 0.28
SEMA3B-209ENST00000456560 PPICP45877 212 aa16.78■□□□□ 0.28
SEMA3B-209ENST00000456560 MAB21L1Q13394 359 aa16.78■□□□□ 0.28
SEMA3B-209ENST00000456560 IL10RAQ13651 578 aa16.78■□□□□ 0.28
SEMA3B-209ENST00000456560 GRM7Q14831 915 aa16.78■□□□□ 0.28
SEMA3B-209ENST00000456560 SMAD2Q15796 467 aaKnown RBP16.78■□□□□ 0.28
SEMA3B-209ENST00000456560 ZNF57Q68EA5 555 aaPredicted RBP16.78■□□□□ 0.28
SEMA3B-209ENST00000456560 SIGIRRQ6IA17 410 aa16.78■□□□□ 0.28
SEMA3B-209ENST00000456560 ZNF767PQ75MW2 155 aa16.78■□□□□ 0.28
SEMA3B-209ENST00000456560 LRRC75AQ8NAA5 344 aa16.78■□□□□ 0.28
SEMA3B-209ENST00000456560 RASD2Q96D21 266 aa16.78■□□□□ 0.28
SEMA3B-209ENST00000456560 LMAN1LQ9HAT1 526 aa16.78■□□□□ 0.28
SEMA3B-209ENST00000456560 GALNT9Q9HCQ5 603 aa16.78■□□□□ 0.28
SEMA3B-209ENST00000456560 EXOSC3Q9NQT5 275 aaKnown RBP16.78■□□□□ 0.28
SEMA3B-209ENST00000456560 KLHL1Q9NR64 748 aa16.78■□□□□ 0.28
SEMA3B-209ENST00000456560 STMN3Q9NZ72 180 aa16.78■□□□□ 0.28
SEMA3B-209ENST00000456560 TEKT2Q9UIF3 430 aa16.78■□□□□ 0.28
SEMA3B-209ENST00000456560 ELOA3DA6NLF2 546 aaPredicted RBP16.77■□□□□ 0.28
SEMA3B-209ENST00000456560 UCHL1P09936 223 aa16.77■□□□□ 0.28
SEMA3B-209ENST00000456560 MAOBP27338 520 aa16.77■□□□□ 0.28
SEMA3B-209ENST00000456560 AGFG1P52594 562 aaKnown RBP16.77■□□□□ 0.28
SEMA3B-209ENST00000456560 GPR176Q14439 515 aa16.77■□□□□ 0.28
SEMA3B-209ENST00000456560 ZNF74Q16587 644 aa16.77■□□□□ 0.28
SEMA3B-209ENST00000456560 ELOA3BQ3SY89 546 aa16.77■□□□□ 0.28
SEMA3B-209ENST00000456560 LINC01590Q5TEZ4 76 aa16.77■□□□□ 0.28
SEMA3B-209ENST00000456560 OGFOD3Q6PK18 319 aa16.77■□□□□ 0.28
SEMA3B-209ENST00000456560 UNQ9370/PRO34162Q6UXP9 181 aa16.77■□□□□ 0.28
SEMA3B-209ENST00000456560 APOOLQ6UXV4 268 aa16.77■□□□□ 0.28
SEMA3B-209ENST00000456560 CREB3L2Q70SY1 520 aa16.77■□□□□ 0.28
SEMA3B-209ENST00000456560 SLITRK4Q8IW52 837 aa16.77■□□□□ 0.28
SEMA3B-209ENST00000456560 GPR135Q8IZ08 494 aa16.77■□□□□ 0.28
SEMA3B-209ENST00000456560 ELMOD2Q8IZ81 293 aa16.77■□□□□ 0.28
SEMA3B-209ENST00000456560 GHDCQ8N2G8 530 aa16.77■□□□□ 0.28
SEMA3B-209ENST00000456560 FAM109AQ8N4B1 249 aa16.77■□□□□ 0.28
SEMA3B-209ENST00000456560 DTX3Q8N9I9 347 aa16.77■□□□□ 0.28
SEMA3B-209ENST00000456560 ELOA3Q8NG57 546 aa16.77■□□□□ 0.28
SEMA3B-209ENST00000456560 SNX33Q8WV41 574 aa16.77■□□□□ 0.28
SEMA3B-209ENST00000456560 RAB33BQ9H082 229 aa16.77■□□□□ 0.28
SEMA3B-209ENST00000456560 HDHD2Q9H0R4 259 aa16.77■□□□□ 0.28
SEMA3B-209ENST00000456560 EPHA6Q9UF33 1036 aa16.77■□□□□ 0.28
SEMA3B-209ENST00000456560 HIF3AQ9Y2N7 669 aa16.77■□□□□ 0.28
SEMA3B-209ENST00000456560 H3BMH7 237 aa16.77■□□□□ 0.27
SEMA3B-209ENST00000456560 ICMTO60725 284 aa16.77■□□□□ 0.27
SEMA3B-209ENST00000456560 UBL4AP11441 157 aa16.77■□□□□ 0.27
SEMA3B-209ENST00000456560 SRFP11831 508 aa16.77■□□□□ 0.27
SEMA3B-209ENST00000456560 LAMTOR1Q6IAA8 161 aa16.77■□□□□ 0.27
SEMA3B-209ENST00000456560 RFT1Q96AA3 541 aa16.77■□□□□ 0.27
SEMA3B-209ENST00000456560 ABHD1Q96SE0 405 aa16.77■□□□□ 0.27
SEMA3B-209ENST00000456560 NXF5Q9H1B4 397 aaKnown RBP16.77■□□□□ 0.27
SEMA3B-209ENST00000456560 GNG8Q9UK08 70 aa16.77■□□□□ 0.27
SEMA3B-209ENST00000456560 MMACHCQ9Y4U1 282 aa16.77■□□□□ 0.27
SEMA3B-209ENST00000456560 PCDH15Q96QU1 1955 aa16.77■□□□□ 0.27
SEMA3B-209ENST00000456560 INMT-MINDY4F8WBC2 141 aa16.76■□□□□ 0.27
SEMA3B-209ENST00000456560 FZD7O75084 574 aa16.76■□□□□ 0.27
SEMA3B-209ENST00000456560 GATBO75879 557 aaKnown RBP16.76■□□□□ 0.27
SEMA3B-209ENST00000456560 GLCEO94923 617 aa16.76■□□□□ 0.27
SEMA3B-209ENST00000456560 UTS2O95399 124 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms