RNA–Protein interactions for RNA: ENST00000455883.2

CSMD3-204, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 12,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-204ENST00000455883 ZNF322Q6U7Q0 402 aaPredicted RBP4.88□□□□□ -1.63
CSMD3-204ENST00000455883 BEND4Q6ZU67 534 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 MAML2Q8IZL2 1156 aaPredicted RBP4.88□□□□□ -1.63
CSMD3-204ENST00000455883 FBXL6Q8N531 539 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 LMNTD1Q8N9Z9 388 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 NFKBIDQ8NI38 313 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 CBLCQ9ULV8 474 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 KCTD3Q9Y597 815 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 PKD1L2Q7Z442 2459 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 MAN2B1O00754 1011 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 ICMTO60725 284 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 SCGB1D1O95968 90 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 FPR3P25089 353 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 OPRL1P41146 370 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 LBX2Q6XYB7 198 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 VTCN1Q7Z7D3 282 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 PLPP6Q8IY26 295 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 SPICQ8N5J4 248 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 OR52P1PQ8NH57 321 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 NEIL1Q96FI4 390 aaPredicted RBP4.88□□□□□ -1.63
CSMD3-204ENST00000455883 HMCESQ96FZ2 354 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 MAP3K3Q99759 626 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 C20orf85Q9H1P6 137 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 NMUR1Q9HB89 426 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 PPP1R14DQ9NXH3 145 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 NUMBLQ9Y6R0 609 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 LOC100509620A0A075B734 347 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 MTMR11A4FU01 709 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 PTBP3O95758 552 aaKnown RBP4.88□□□□□ -1.63
CSMD3-204ENST00000455883 SRMP19623 302 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 MTCP1P56278 107 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 MAP4K2Q12851 820 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 CAMK2BQ13554 666 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 CLLU1Q5K131 121 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 VRK2Q86Y07 508 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 NETO2Q8NC67 525 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 POM121Q96HA1 1249 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 GABARAPL3Q9BY60 117 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 FKBP11Q9NYL4 201 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 SLC9B1P1A6NJY1 282 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 LRRC30A6NM36 301 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 ANHXE9PGG2 379 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 SDHDO14521 159 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 GP1BAP07359 652 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 ZNF345Q14585 488 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 RPL7L1Q6DKI1 246 aaKnown RBP4.88□□□□□ -1.63
CSMD3-204ENST00000455883 UEVLDQ8IX04 471 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 ZNF595Q8IYB9 648 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 CARFQ8N187 725 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 STXBP6Q8NFX7 210 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 DPF1Q92782 380 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 PGAM5Q96HS1 289 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 SAMD8Q96LT4 415 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 CTDSP1Q9GZU7 261 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 GDE1Q9NZC3 331 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 EXOGQ9Y2C4 368 aaKnown RBP4.88□□□□□ -1.63
CSMD3-204ENST00000455883 LTBP3Q9NS15 1303 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 TRAV1-2A0A0B4J238 106 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 TMEM221A6NGB7 291 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 SIGLEC6O43699 453 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 HIST1H1BP16401 226 aaKnown RBP4.88□□□□□ -1.63
CSMD3-204ENST00000455883 TYRP1P17643 537 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 MSX1P28360 303 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 BAXQ07812 192 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 GPR17Q13304 367 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 SGCBQ16585 318 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 DTWD2Q8NBA8 298 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 NETO1Q8TDF5 533 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 SEH1LQ96EE3 360 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 STACQ99469 402 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 NMNAT2Q9BZQ4 307 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 HSD3B7Q9H2F3 369 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 TP63Q9H3D4 680 aaPredicted RBP4.88□□□□□ -1.63
CSMD3-204ENST00000455883 NKX1-2Q9UD57 310 aaPredicted RBP4.88□□□□□ -1.63
CSMD3-204ENST00000455883 PCDHGA6Q9Y5G7 932 aa4.88□□□□□ -1.63
CSMD3-204ENST00000455883 ROBO1Q9Y6N7 1651 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 MYOCOSA0A1B0GUC4 107 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 RPP14O95059 124 aaKnown RBP4.87□□□□□ -1.63
CSMD3-204ENST00000455883 TSPAN12O95859 305 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 DCTP40126 519 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 BCL6P41182 706 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 ELFN2Q5R3F8 820 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 ADAM5Q6NVV9 412 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 ZNF343Q6P1L6 599 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 OR51F2Q8NH61 342 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 IFI44Q8TCB0 444 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 NSUN3Q9H649 340 aaKnown RBP4.87□□□□□ -1.63
CSMD3-204ENST00000455883 ATP13A2Q9NQ11 1180 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 GPATCH2LQ9NWQ4 482 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 GLI3P10071 1580 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 IGKV6D-41A0A0C4DH26 115 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 SULT2B1O00204 365 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 SEPT4O43236 478 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 PGA3P0DJD8 388 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 FOXK1P85037 733 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 VWA2Q5GFL6 755 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 PHYHD1Q5SRE7 291 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 RNLSQ5VYX0 342 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 DESI1Q6ICB0 168 aa4.87□□□□□ -1.63
CSMD3-204ENST00000455883 LGI3Q8N145 548 aa4.87□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms