RNA–Protein interactions for RNA: ENST00000455732.5

USP39-208, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 623 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-208ENST00000455732 MRPL33O75394 65 aaKnown RBP15.33■□□□□ 0.04
USP39-208ENST00000455732 ADAP00813 363 aa15.33■□□□□ 0.04
USP39-208ENST00000455732 THBDP07204 575 aa15.33■□□□□ 0.04
USP39-208ENST00000455732 NTF4P34130 210 aa15.33■□□□□ 0.04
USP39-208ENST00000455732 RPS5P46782 204 aaKnown RBP15.33■□□□□ 0.04
USP39-208ENST00000455732 NUDT2P50583 147 aa15.33■□□□□ 0.04
USP39-208ENST00000455732 CDH12P55289 794 aa15.33■□□□□ 0.04
USP39-208ENST00000455732 ITGADQ13349 1161 aa15.33■□□□□ 0.04
USP39-208ENST00000455732 FBXW9Q5XUX1 488 aa15.33■□□□□ 0.04
USP39-208ENST00000455732 ANKRD34AQ69YU3 496 aa15.33■□□□□ 0.04
USP39-208ENST00000455732 OR9K2Q8NGE7 335 aa15.33■□□□□ 0.04
USP39-208ENST00000455732 KISS1RQ969F8 398 aaPredicted RBP15.33■□□□□ 0.04
USP39-208ENST00000455732 EPYCQ99645 322 aa15.33■□□□□ 0.04
USP39-208ENST00000455732 TMEM43Q9BTV4 400 aa15.33■□□□□ 0.04
USP39-208ENST00000455732 PARPBPQ9NWS1 579 aa15.33■□□□□ 0.04
USP39-208ENST00000455732 ABCD2Q9UBJ2 740 aa15.33■□□□□ 0.04
USP39-208ENST00000455732 EDARQ9UNE0 448 aa15.33■□□□□ 0.04
USP39-208ENST00000455732 RASD1Q9Y272 281 aa15.33■□□□□ 0.04
USP39-208ENST00000455732 ARID1AO14497 2285 aa15.33■□□□□ 0.04
USP39-208ENST00000455732 ZNF469Q96JG9 3925 aaPredicted RBP15.33■□□□□ 0.04
USP39-208ENST00000455732 NME4O00746 187 aa15.32■□□□□ 0.04
USP39-208ENST00000455732 CHP2O43745 196 aa15.32■□□□□ 0.04
USP39-208ENST00000455732 ATE1O95260 518 aa15.32■□□□□ 0.04
USP39-208ENST00000455732 IL32P24001 234 aa15.32■□□□□ 0.04
USP39-208ENST00000455732 DNASE1P24855 282 aa15.32■□□□□ 0.04
USP39-208ENST00000455732 LOXP28300 417 aaPredicted RBP15.32■□□□□ 0.04
USP39-208ENST00000455732 KDELR2P33947 212 aa15.32■□□□□ 0.04
USP39-208ENST00000455732 SLC7A2P52569 658 aa15.32■□□□□ 0.04
USP39-208ENST00000455732 LIPEQ05469 1076 aa15.32■□□□□ 0.04
USP39-208ENST00000455732 MFSD13AQ14CX5 517 aa15.32■□□□□ 0.04
USP39-208ENST00000455732 ENTPD8Q5MY95 495 aa15.32■□□□□ 0.04
USP39-208ENST00000455732 LINC00114Q6XXX2 140 aa15.32■□□□□ 0.04
USP39-208ENST00000455732 RBM45Q8IUH3 476 aaKnown RBP15.32■□□□□ 0.04
USP39-208ENST00000455732 ZIC4Q8N9L1 334 aa15.32■□□□□ 0.04
USP39-208ENST00000455732 VANGL1Q8TAA9 524 aaPredicted RBP15.32■□□□□ 0.04
USP39-208ENST00000455732 ADAMTS16Q8TE57 1224 aa15.32■□□□□ 0.04
USP39-208ENST00000455732 PROX1Q92786 737 aa15.32■□□□□ 0.04
USP39-208ENST00000455732 TAAR8Q969N4 342 aa15.32■□□□□ 0.04
USP39-208ENST00000455732 MBD6Q96DN6 1003 aa15.32■□□□□ 0.04
USP39-208ENST00000455732 POLR2J2Q9GZM3 115 aaKnown RBP15.32■□□□□ 0.04
USP39-208ENST00000455732 POLR2J3Q9H1A7 115 aaKnown RBP15.32■□□□□ 0.04
USP39-208ENST00000455732 SETD2Q9BYW2 2564 aaPredicted RBP15.32■□□□□ 0.04
USP39-208ENST00000455732 ACANP16112 2415 aa15.32■□□□□ 0.04
USP39-208ENST00000455732 VPS13CQ709C8 3753 aa15.31■□□□□ 0.04
USP39-208ENST00000455732 TRAPPC13A5PLN9 417 aa15.31■□□□□ 0.04
USP39-208ENST00000455732 LYPD3O95274 346 aa15.31■□□□□ 0.04
USP39-208ENST00000455732 RAF1P04049 648 aa15.31■□□□□ 0.04
USP39-208ENST00000455732 GTF2E2P29084 291 aaKnown RBP15.31■□□□□ 0.04
USP39-208ENST00000455732 CYBRD1Q53TN4 286 aa15.31■□□□□ 0.04
USP39-208ENST00000455732 TMEM225Q6GV28 225 aa15.31■□□□□ 0.04
USP39-208ENST00000455732 CASP12Q6UXS9 341 aa15.31■□□□□ 0.04
USP39-208ENST00000455732 ZC3HAV1Q7Z2W4 902 aaKnown RBP15.31■□□□□ 0.04
USP39-208ENST00000455732 CARM1Q86X55 608 aa15.31■□□□□ 0.04
USP39-208ENST00000455732 ANKS4BQ8N8V4 417 aa15.31■□□□□ 0.04
USP39-208ENST00000455732 ADPRHL1Q8NDY3 354 aa15.31■□□□□ 0.04
USP39-208ENST00000455732 S100PBPQ96BU1 408 aa15.31■□□□□ 0.04
USP39-208ENST00000455732 SLC25A36Q96CQ1 311 aa15.31■□□□□ 0.04
USP39-208ENST00000455732 ZC3HAV1LQ96H79 300 aaKnown RBP15.31■□□□□ 0.04
USP39-208ENST00000455732 ZNF426Q9BUY5 554 aa15.31■□□□□ 0.04
USP39-208ENST00000455732 ALG2Q9H553 416 aa15.31■□□□□ 0.04
USP39-208ENST00000455732 B3GALT5Q9Y2C3 310 aa15.31■□□□□ 0.04
USP39-208ENST00000455732 CORINQ9Y5Q5 1042 aa15.31■□□□□ 0.04
USP39-208ENST00000455732 CADP27708 2225 aa15.31■□□□□ 0.04
USP39-208ENST00000455732 FLNAP21333 2647 aaKnown RBP15.3■□□□□ 0.04
USP39-208ENST00000455732 CPSF4LA6NMK7 179 aaKnown RBP15.3■□□□□ 0.04
USP39-208ENST00000455732 PDLIM1O00151 329 aa15.3■□□□□ 0.04
USP39-208ENST00000455732 DCTN3O75935 186 aa15.3■□□□□ 0.04
USP39-208ENST00000455732 THY1P04216 161 aa15.3■□□□□ 0.04
USP39-208ENST00000455732 IGHV1-2P23083 117 aa15.3■□□□□ 0.04
USP39-208ENST00000455732 GSK3BP49841 420 aa15.3■□□□□ 0.04
USP39-208ENST00000455732 LRRC23Q53EV4 343 aaPredicted RBP15.3■□□□□ 0.04
USP39-208ENST00000455732 BEX5Q5H9J7 111 aa15.3■□□□□ 0.04
USP39-208ENST00000455732 CREB3L2Q70SY1 520 aa15.3■□□□□ 0.04
USP39-208ENST00000455732 BHLHA15Q7RTS1 189 aaPredicted RBP15.3■□□□□ 0.04
USP39-208ENST00000455732 SSX8Q7RTT4 187 aa15.3■□□□□ 0.04
USP39-208ENST00000455732 GPAT4Q86UL3 456 aa15.3■□□□□ 0.04
USP39-208ENST00000455732 TSPYL5Q86VY4 417 aaPredicted RBP15.3■□□□□ 0.04
USP39-208ENST00000455732 SCAIQ8N9R8 606 aa15.3■□□□□ 0.04
USP39-208ENST00000455732 HSD17B8Q92506 261 aa15.3■□□□□ 0.04
USP39-208ENST00000455732 SLC41A3Q96GZ6 507 aa15.3■□□□□ 0.04
USP39-208ENST00000455732 MPP4Q96JB8 637 aa15.3■□□□□ 0.04
USP39-208ENST00000455732 ZNF385AQ96PM9 386 aaKnown RBP15.3■□□□□ 0.04
USP39-208ENST00000455732 LRRC37BQ96QE4 947 aa15.3■□□□□ 0.04
USP39-208ENST00000455732 ALPK1Q96QP1 1244 aa15.3■□□□□ 0.04
USP39-208ENST00000455732 ASB6Q9NWX5 421 aa15.3■□□□□ 0.04
USP39-208ENST00000455732 FAM53CQ9NYF3 392 aa15.3■□□□□ 0.04
USP39-208ENST00000455732 LOC102725191A0A1B0GVB3 256 aa15.29■□□□□ 0.04
USP39-208ENST00000455732 M0R082 166 aa15.29■□□□□ 0.04
USP39-208ENST00000455732 KLF4O43474 513 aa15.29■□□□□ 0.04
USP39-208ENST00000455732 LYZL6O75951 148 aa15.29■□□□□ 0.04
USP39-208ENST00000455732 BGLAPP02818 100 aa15.29■□□□□ 0.04
USP39-208ENST00000455732 GRPRP30550 384 aa15.29■□□□□ 0.04
USP39-208ENST00000455732 PSME3P61289 254 aa15.29■□□□□ 0.04
USP39-208ENST00000455732 KEAP1Q14145 624 aa15.29■□□□□ 0.04
USP39-208ENST00000455732 TSC22D1Q15714 1073 aa15.29■□□□□ 0.04
USP39-208ENST00000455732 WDR88Q6ZMY6 472 aa15.29■□□□□ 0.04
USP39-208ENST00000455732 H1FNTQ75WM6 255 aaPredicted RBP15.29■□□□□ 0.04
USP39-208ENST00000455732 P3H2Q8IVL5 708 aa15.29■□□□□ 0.04
USP39-208ENST00000455732 UBE2J2Q8N2K1 259 aa15.29■□□□□ 0.04
USP39-208ENST00000455732 ZNF433Q8N7K0 673 aaPredicted RBP15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms