RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 ZNF432O94892 652 aa13.97□□□□□ -0.17
GPC1-206ENST00000455111 KRT75O95678 551 aa13.97□□□□□ -0.17
GPC1-206ENST00000455111 IL6P05231 212 aa13.97□□□□□ -0.17
GPC1-206ENST00000455111 CXCR1P25024 350 aa13.97□□□□□ -0.17
GPC1-206ENST00000455111 HTR2AP28223 471 aa13.97□□□□□ -0.17
GPC1-206ENST00000455111 CALCRP30988 508 aa13.97□□□□□ -0.17
GPC1-206ENST00000455111 CRATP43155 626 aa13.97□□□□□ -0.17
GPC1-206ENST00000455111 MAP2K6P52564 334 aa13.97□□□□□ -0.17
GPC1-206ENST00000455111 VLDLRP98155 873 aa13.97□□□□□ -0.17
GPC1-206ENST00000455111 LIN52Q52LA3 116 aa13.97□□□□□ -0.17
GPC1-206ENST00000455111 WBP2NLQ6ICG8 309 aa13.97□□□□□ -0.17
GPC1-206ENST00000455111 GPAT4Q86UL3 456 aa13.97□□□□□ -0.17
GPC1-206ENST00000455111 FUNDC1Q8IVP5 155 aa13.97□□□□□ -0.17
GPC1-206ENST00000455111 PEX5LQ8IYB4 626 aa13.97□□□□□ -0.17
GPC1-206ENST00000455111 KTI12Q96EK9 354 aaPredicted RBP13.97□□□□□ -0.17
GPC1-206ENST00000455111 PRR14Q9BWN1 585 aa13.97□□□□□ -0.17
GPC1-206ENST00000455111 SPATA9Q9BWV2 254 aa13.97□□□□□ -0.17
GPC1-206ENST00000455111 ZIM2Q9NZV7 527 aa13.97□□□□□ -0.17
GPC1-206ENST00000455111 SLAMF8Q9P0V8 285 aa13.97□□□□□ -0.17
GPC1-206ENST00000455111 CRNNQ9UBG3 495 aaPredicted RBP13.97□□□□□ -0.17
GPC1-206ENST00000455111 TRPC5OSA6NMA1 111 aa13.96□□□□□ -0.17
GPC1-206ENST00000455111 TP53P04637 393 aaPredicted RBP13.96□□□□□ -0.17
GPC1-206ENST00000455111 CELA3BP08861 270 aa13.96□□□□□ -0.17
GPC1-206ENST00000455111 PNMTP11086 282 aa13.96□□□□□ -0.17
GPC1-206ENST00000455111 BMP2P12643 396 aa13.96□□□□□ -0.17
GPC1-206ENST00000455111 IDO1P14902 403 aa13.96□□□□□ -0.17
GPC1-206ENST00000455111 ZNF16P17020 682 aaPredicted RBP13.96□□□□□ -0.17
GPC1-206ENST00000455111 APOBEC3AP31941 199 aaPredicted RBP13.96□□□□□ -0.17
GPC1-206ENST00000455111 LRRC74AQ0VAA2 488 aa13.96□□□□□ -0.17
GPC1-206ENST00000455111 RAB35Q15286 201 aa13.96□□□□□ -0.17
GPC1-206ENST00000455111 GLIPR1L2Q4G1C9 344 aa13.96□□□□□ -0.17
GPC1-206ENST00000455111 PHYHD1Q5SRE7 291 aa13.96□□□□□ -0.17
GPC1-206ENST00000455111 NXNQ6DKJ4 435 aa13.96□□□□□ -0.17
GPC1-206ENST00000455111 ZNF440Q8IYI8 595 aa13.96□□□□□ -0.17
GPC1-206ENST00000455111 KIRREL3Q8IZU9 778 aa13.96□□□□□ -0.17
GPC1-206ENST00000455111 SOX7Q9BT81 388 aa13.96□□□□□ -0.17
GPC1-206ENST00000455111 A0A096LPE4 126 aa13.95□□□□□ -0.18
GPC1-206ENST00000455111 A0A1W2PPZ6 126 aa13.95□□□□□ -0.18
GPC1-206ENST00000455111 SLC35F4A4IF30 521 aa13.95□□□□□ -0.18
GPC1-206ENST00000455111 ZNF500O60304 480 aaPredicted RBP13.95□□□□□ -0.18
GPC1-206ENST00000455111 TPST1O60507 370 aa13.95□□□□□ -0.18
GPC1-206ENST00000455111 F12P00748 615 aaPredicted RBP13.95□□□□□ -0.18
GPC1-206ENST00000455111 IGLV1-44P01699 117 aa13.95□□□□□ -0.18
GPC1-206ENST00000455111 POLR2JP52435 117 aaKnown RBP13.95□□□□□ -0.18
GPC1-206ENST00000455111 EFNA4P52798 201 aa13.95□□□□□ -0.18
GPC1-206ENST00000455111 CRISP3P54108 245 aa13.95□□□□□ -0.18
GPC1-206ENST00000455111 SLC18A1P54219 525 aa13.95□□□□□ -0.18
GPC1-206ENST00000455111 PRPS1P60891 318 aa13.95□□□□□ -0.18
GPC1-206ENST00000455111 MAGOHP61326 146 aaKnown RBP13.95□□□□□ -0.18
GPC1-206ENST00000455111 RGNQ15493 299 aa13.95□□□□□ -0.18
GPC1-206ENST00000455111 NIPAL3Q6P499 406 aa13.95□□□□□ -0.18
GPC1-206ENST00000455111 CLEC2AQ6UVW9 174 aa13.95□□□□□ -0.18
GPC1-206ENST00000455111 NHLRC1Q6VVB1 395 aa13.95□□□□□ -0.18
GPC1-206ENST00000455111 ANKS4BQ8N8V4 417 aa13.95□□□□□ -0.18
GPC1-206ENST00000455111 POMGNT2Q8NAT1 580 aa13.95□□□□□ -0.18
GPC1-206ENST00000455111 FAM168AQ92567 244 aa13.95□□□□□ -0.18
GPC1-206ENST00000455111 FBXO17Q96EF6 278 aa13.95□□□□□ -0.18
GPC1-206ENST00000455111 ZBTB18Q99592 522 aa13.95□□□□□ -0.18
GPC1-206ENST00000455111 IKZF5Q9H5V7 419 aa13.95□□□□□ -0.18
GPC1-206ENST00000455111 PIF1Q9H611 641 aa13.95□□□□□ -0.18
GPC1-206ENST00000455111 BCL2L10Q9HD36 194 aa13.95□□□□□ -0.18
GPC1-206ENST00000455111 TRBV5-3A0A0A0MS03 114 aa13.94□□□□□ -0.18
GPC1-206ENST00000455111 A0A0G2JPF8 293 aa13.94□□□□□ -0.18
GPC1-206ENST00000455111 HNRNPCL2B2RXH8 293 aa13.94□□□□□ -0.18
GPC1-206ENST00000455111 HNRNPCL3B7ZW38 293 aa13.94□□□□□ -0.18
GPC1-206ENST00000455111 TPST2O60704 377 aa13.94□□□□□ -0.18
GPC1-206ENST00000455111 HNRNPCL1O60812 293 aaKnown RBP13.94□□□□□ -0.18
GPC1-206ENST00000455111 CECR9P0C854 216 aa13.94□□□□□ -0.18
GPC1-206ENST00000455111 HNRNPCL4P0DMR1 293 aa13.94□□□□□ -0.18
GPC1-206ENST00000455111 SLC25A16P16260 332 aa13.94□□□□□ -0.18
GPC1-206ENST00000455111 RPS5P46782 204 aaKnown RBP13.94□□□□□ -0.18
GPC1-206ENST00000455111 ANXA11P50995 505 aaKnown RBP13.94□□□□□ -0.18
GPC1-206ENST00000455111 SRSF2Q01130 221 aaKnown RBP13.94□□□□□ -0.18
GPC1-206ENST00000455111 HGFACQ04756 655 aa13.94□□□□□ -0.18
GPC1-206ENST00000455111 GNA13Q14344 377 aa13.94□□□□□ -0.18
GPC1-206ENST00000455111 ADIPOQQ15848 244 aa13.94□□□□□ -0.18
GPC1-206ENST00000455111 MSMPQ1L6U9 139 aa13.94□□□□□ -0.18
GPC1-206ENST00000455111 PAGE3Q5JUK9 113 aa13.94□□□□□ -0.18
GPC1-206ENST00000455111 EPGNQ6UW88 154 aa13.94□□□□□ -0.18
GPC1-206ENST00000455111 C6orf89Q6UWU4 347 aa13.94□□□□□ -0.18
GPC1-206ENST00000455111 MSANTD1Q6ZTZ1 278 aa13.94□□□□□ -0.18
GPC1-206ENST00000455111 STK35Q8TDR2 534 aa13.94□□□□□ -0.18
GPC1-206ENST00000455111 TAAR8Q969N4 342 aa13.94□□□□□ -0.18
GPC1-206ENST00000455111 SLC38A2Q96QD8 506 aa13.94□□□□□ -0.18
GPC1-206ENST00000455111 EBF4Q9BQW3 602 aa13.94□□□□□ -0.18
GPC1-206ENST00000455111 LINC00470Q9BZP3 86 aa13.94□□□□□ -0.18
GPC1-206ENST00000455111 TMBIM4Q9HC24 238 aa13.94□□□□□ -0.18
GPC1-206ENST00000455111 A4GALTQ9NPC4 353 aa13.94□□□□□ -0.18
GPC1-206ENST00000455111 ARPC4-TTLL3A0A0A6YYG9 625 aa13.93□□□□□ -0.18
GPC1-206ENST00000455111 IGHV4-61A0A0C4DH41 118 aa13.93□□□□□ -0.18
GPC1-206ENST00000455111 UBDO15205 165 aa13.93□□□□□ -0.18
GPC1-206ENST00000455111 HPRP00739 348 aa13.93□□□□□ -0.18
GPC1-206ENST00000455111 UQCRBP14927 111 aa13.93□□□□□ -0.18
GPC1-206ENST00000455111 IGFBP5P24593 272 aa13.93□□□□□ -0.18
GPC1-206ENST00000455111 MRPL19P49406 292 aaKnown RBP13.93□□□□□ -0.18
GPC1-206ENST00000455111 DSCR9P59020 149 aa13.93□□□□□ -0.18
GPC1-206ENST00000455111 NAAAQ02083 359 aa13.93□□□□□ -0.18
GPC1-206ENST00000455111 ZNF311Q5JNZ3 666 aa13.93□□□□□ -0.18
GPC1-206ENST00000455111 LRIF1Q5T3J3 769 aa13.93□□□□□ -0.18
GPC1-206ENST00000455111 PRAMEF8Q5VWM4 474 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms