RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 LNX2Q8N448 690 aa4.44□□□□□ -1.7
RIF1-207ENST00000454583 SMYD1Q8NB12 490 aa4.44□□□□□ -1.7
RIF1-207ENST00000454583 SETD9Q8NE22 299 aa4.44□□□□□ -1.7
RIF1-207ENST00000454583 OR2M7Q8NG81 312 aa4.44□□□□□ -1.7
RIF1-207ENST00000454583 TMEM163Q8TC26 289 aa4.44□□□□□ -1.7
RIF1-207ENST00000454583 ZPLD1Q8TCW7 415 aa4.44□□□□□ -1.7
RIF1-207ENST00000454583 STK35Q8TDR2 534 aa4.44□□□□□ -1.7
RIF1-207ENST00000454583 SSC4DQ8WTU2 575 aa4.44□□□□□ -1.7
RIF1-207ENST00000454583 ST8SIA1Q92185 356 aa4.44□□□□□ -1.7
RIF1-207ENST00000454583 TAAR8Q969N4 342 aa4.44□□□□□ -1.7
RIF1-207ENST00000454583 EFHD2Q96C19 240 aaPredicted RBP4.44□□□□□ -1.7
RIF1-207ENST00000454583 LGALS12Q96DT0 336 aa4.44□□□□□ -1.7
RIF1-207ENST00000454583 MAGED4Q96JG8 741 aa4.44□□□□□ -1.7
RIF1-207ENST00000454583 ARHGAP9Q9BRR9 750 aa4.44□□□□□ -1.7
RIF1-207ENST00000454583 YIPF4Q9BSR8 244 aa4.44□□□□□ -1.7
RIF1-207ENST00000454583 CRB3Q9BUF7 120 aa4.44□□□□□ -1.7
RIF1-207ENST00000454583 SRXN1Q9BYN0 137 aa4.44□□□□□ -1.7
RIF1-207ENST00000454583 MIXL1Q9H2W2 232 aa4.44□□□□□ -1.7
RIF1-207ENST00000454583 KRT84Q9NSB2 600 aa4.44□□□□□ -1.7
RIF1-207ENST00000454583 TBCCD1Q9NVR7 557 aa4.44□□□□□ -1.7
RIF1-207ENST00000454583 SAMHD1Q9Y3Z3 626 aaKnown RBP4.44□□□□□ -1.7
RIF1-207ENST00000454583 U3KQV3 271 aa4.44□□□□□ -1.7
RIF1-207ENST00000454583 A0A1B0GWA3 101 aa4.44□□□□□ -1.7
RIF1-207ENST00000454583 LIPT2A6NK58 231 aa4.44□□□□□ -1.7
RIF1-207ENST00000454583 CLDN4O14493 209 aa4.44□□□□□ -1.7
RIF1-207ENST00000454583 HS6ST1O60243 411 aa4.44□□□□□ -1.7
RIF1-207ENST00000454583 CCNB2O95067 398 aa4.44□□□□□ -1.7
RIF1-207ENST00000454583 SNX4O95219 450 aa4.44□□□□□ -1.7
RIF1-207ENST00000454583 STAMBPO95630 424 aa4.44□□□□□ -1.7
RIF1-207ENST00000454583 CELA3AP09093 270 aa4.44□□□□□ -1.7
RIF1-207ENST00000454583 ZNF182P17025 639 aaPredicted RBP4.44□□□□□ -1.7
RIF1-207ENST00000454583 OPRL1P41146 370 aa4.44□□□□□ -1.7
RIF1-207ENST00000454583 SLC1A3P43003 542 aa4.44□□□□□ -1.7
RIF1-207ENST00000454583 ETV1P50549 477 aa4.44□□□□□ -1.7
RIF1-207ENST00000454583 SKP1P63208 163 aa4.44□□□□□ -1.7
RIF1-207ENST00000454583 TMED1Q13445 227 aa4.44□□□□□ -1.7
RIF1-207ENST00000454583 EFR3AQ14156 821 aa4.44□□□□□ -1.7
RIF1-207ENST00000454583 BCL2A1Q16548 175 aa4.44□□□□□ -1.7
RIF1-207ENST00000454583 C4orf48Q5BLP8 95 aa4.44□□□□□ -1.7
RIF1-207ENST00000454583 CEP78Q5JTW2 689 aa4.44□□□□□ -1.7
RIF1-207ENST00000454583 ASPHD2Q6ICH7 369 aa4.44□□□□□ -1.7
RIF1-207ENST00000454583 FIGNL1Q6PIW4 674 aa4.44□□□□□ -1.7
RIF1-207ENST00000454583 DCDC5Q6ZRR9 648 aa4.44□□□□□ -1.7
RIF1-207ENST00000454583 SULF2Q8IWU5 870 aa4.44□□□□□ -1.7
RIF1-207ENST00000454583 AQP11Q8NBQ7 271 aa4.44□□□□□ -1.7
RIF1-207ENST00000454583 RPL3LQ92901 407 aaKnown RBP4.44□□□□□ -1.7
RIF1-207ENST00000454583 PTP4A1Q93096 173 aa4.44□□□□□ -1.7
RIF1-207ENST00000454583 DSN1Q9H410 356 aa4.44□□□□□ -1.7
RIF1-207ENST00000454583 CCNB1IP1Q9NPC3 277 aa4.44□□□□□ -1.7
RIF1-207ENST00000454583 GPR83Q9NYM4 423 aa4.44□□□□□ -1.7
RIF1-207ENST00000454583 CALML5Q9NZT1 146 aa4.44□□□□□ -1.7
RIF1-207ENST00000454583 PTRH2Q9Y3E5 179 aaKnown RBP4.44□□□□□ -1.7
RIF1-207ENST00000454583 TESMINQ9Y4I5 508 aa4.44□□□□□ -1.7
RIF1-207ENST00000454583 V9GYQ6 96 aa4.44□□□□□ -1.7
RIF1-207ENST00000454583 RPL36A-HNRNPH2H7BZ11 118 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 IMPA2O14732 288 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 RAMP1O60894 148 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 ZFAND5O76080 213 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 ABHD16AO95870 558 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 FUT1P19526 365 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 MAP2K6P52564 334 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 PIN1Q13526 163 aaPredicted RBP4.43□□□□□ -1.7
RIF1-207ENST00000454583 DAZAP2Q15038 168 aaPredicted RBP4.43□□□□□ -1.7
RIF1-207ENST00000454583 MINDY4Q4G0A6 757 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 LRRC23Q53EV4 343 aaPredicted RBP4.43□□□□□ -1.7
RIF1-207ENST00000454583 PHYHD1Q5SRE7 291 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 TMEM236Q5W0B7 351 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 TMEM91Q6ZNR0 172 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 IGFN1Q86VF2 1251 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 NPEPL1Q8NDH3 523 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 VPS37AQ8NEZ2 397 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 TMEM45BQ96B21 275 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 CLIP3Q96DZ5 547 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 KTI12Q96EK9 354 aaPredicted RBP4.43□□□□□ -1.7
RIF1-207ENST00000454583 WDYHV1Q96HA8 205 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 GFI1Q99684 422 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 KCNJ15Q99712 375 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 ZNF559Q9BR84 538 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 HCAR1Q9BXC0 346 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 FN3KQ9H479 309 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 REEP1Q9H902 201 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 TAS2R16Q9NYV7 291 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 CLEC2DQ9UHP7 191 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 MRPS33Q9Y291 106 aaKnown RBP4.43□□□□□ -1.7
RIF1-207ENST00000454583 A0A087WZY1 265 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 IQCMA0A1B0GVH7 501 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 M0R129 80 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 ZNF264O43296 627 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 TRAF3IP2O43734 574 aaPredicted RBP4.43□□□□□ -1.7
RIF1-207ENST00000454583 MPZL2O60487 215 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 CYP7B1O75881 506 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 GADD45GO95257 159 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 SP1P08047 785 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 APEHP13798 732 aaKnown RBP4.43□□□□□ -1.7
RIF1-207ENST00000454583 EDNRAP25101 427 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 GIPRP48546 466 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 SMCPP49901 116 aaPredicted RBP4.43□□□□□ -1.7
RIF1-207ENST00000454583 RAD23AP54725 363 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 ZNF91Q05481 1191 aa4.43□□□□□ -1.7
RIF1-207ENST00000454583 MLLT11Q13015 90 aaPredicted RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms