RNA–Protein interactions for RNA: ENST00000453453.1

SNX17-204, Transcript of sorting nexin 17, humanhuman

TSL 1 (best)

Gene SNX17, Length 1,638 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-204ENST00000453453 THAP3Q8WTV1 239 aaPredicted RBP14.49□□□□□ -0.09
SNX17-204ENST00000453453 DIO2Q92813 273 aa14.49□□□□□ -0.09
SNX17-204ENST00000453453 CREB3L1Q96BA8 519 aa14.49□□□□□ -0.09
SNX17-204ENST00000453453 PPP1R3EQ9H7J1 279 aa14.49□□□□□ -0.09
SNX17-204ENST00000453453 TESQ9UGI8 421 aaKnown RBP14.49□□□□□ -0.09
SNX17-204ENST00000453453 ACAD8Q9UKU7 415 aa14.49□□□□□ -0.09
SNX17-204ENST00000453453 NUP50Q9UKX7 468 aa14.49□□□□□ -0.09
SNX17-204ENST00000453453 EXOSC1Q9Y3B2 195 aaKnown RBP14.49□□□□□ -0.09
SNX17-204ENST00000453453 MRPS18BQ9Y676 258 aaKnown RBP14.49□□□□□ -0.09
SNX17-204ENST00000453453 NPIPA5A0A0B4J1W7 369 aa14.48□□□□□ -0.09
SNX17-204ENST00000453453 NPIPA7E9PJI5 369 aa14.48□□□□□ -0.09
SNX17-204ENST00000453453 PRKNO60260 465 aaPredicted RBP14.48□□□□□ -0.09
SNX17-204ENST00000453453 SLC19A2O60779 497 aa14.48□□□□□ -0.09
SNX17-204ENST00000453453 NPIPA8P0DM63 369 aa14.48□□□□□ -0.09
SNX17-204ENST00000453453 HPGDP15428 266 aa14.48□□□□□ -0.09
SNX17-204ENST00000453453 GABRA5P31644 462 aa14.48□□□□□ -0.09
SNX17-204ENST00000453453 MRPL28Q13084 256 aaKnown RBP14.48□□□□□ -0.09
SNX17-204ENST00000453453 PUM1Q14671 1186 aaKnown RBP eCLIP14.48□□□□□ -0.09
SNX17-204ENST00000453453 SEC23BQ15437 767 aa14.48□□□□□ -0.09
SNX17-204ENST00000453453 DCST1Q5T197 706 aa14.48□□□□□ -0.09
SNX17-204ENST00000453453 PRICKLE2Q7Z3G6 844 aa14.48□□□□□ -0.09
SNX17-204ENST00000453453 PRR22Q8IZ63 422 aa14.48□□□□□ -0.09
SNX17-204ENST00000453453 ZSCAN1Q8NBB4 408 aa14.48□□□□□ -0.09
SNX17-204ENST00000453453 GPR32P1Q8NGA4 272 aa14.48□□□□□ -0.09
SNX17-204ENST00000453453 OMA1Q96E52 524 aa14.48□□□□□ -0.09
SNX17-204ENST00000453453 EVA1AQ9H8M9 152 aa14.48□□□□□ -0.09
SNX17-204ENST00000453453 ST6GALNAC1Q9NSC7 600 aaPredicted RBP14.48□□□□□ -0.09
SNX17-204ENST00000453453 RYDENQ9NUL5 291 aaKnown RBP14.48□□□□□ -0.09
SNX17-204ENST00000453453 DNAJC27Q9NZQ0 273 aa14.48□□□□□ -0.09
SNX17-204ENST00000453453 IL17BQ9UHF5 180 aa14.48□□□□□ -0.09
SNX17-204ENST00000453453 CLEC2DQ9UHP7 191 aa14.48□□□□□ -0.09
SNX17-204ENST00000453453 TMA7Q9Y2S6 64 aaKnown RBP14.48□□□□□ -0.09
SNX17-204ENST00000453453 NINQ8N4C6 2090 aa14.48□□□□□ -0.09
SNX17-204ENST00000453453 TRDV1A0A1B0GX56 115 aa14.48□□□□□ -0.09
SNX17-204ENST00000453453 C12orf71A8MTZ7 269 aa14.48□□□□□ -0.09
SNX17-204ENST00000453453 J3KTA2 159 aa14.48□□□□□ -0.09
SNX17-204ENST00000453453 WWP2O00308 870 aa14.48□□□□□ -0.09
SNX17-204ENST00000453453 SLC2A2P11168 524 aaPredicted RBP14.48□□□□□ -0.09
SNX17-204ENST00000453453 NID1P14543 1247 aa14.48□□□□□ -0.09
SNX17-204ENST00000453453 HK1P19367 917 aa14.48□□□□□ -0.09
SNX17-204ENST00000453453 ELAVL4P26378 380 aaKnown RBP14.48□□□□□ -0.09
SNX17-204ENST00000453453 ABCD3P28288 659 aa14.48□□□□□ -0.09
SNX17-204ENST00000453453 HOXD11P31277 338 aaPredicted RBP14.48□□□□□ -0.09
SNX17-204ENST00000453453 PNLIPRP2P54317 469 aa14.48□□□□□ -0.09
SNX17-204ENST00000453453 RAB40BQ12829 278 aa14.48□□□□□ -0.09
SNX17-204ENST00000453453 ZNF141Q15928 474 aa14.48□□□□□ -0.09
SNX17-204ENST00000453453 TMEM44Q2T9K0 475 aa14.48□□□□□ -0.09
SNX17-204ENST00000453453 HSD17B12Q53GQ0 312 aa14.48□□□□□ -0.09
SNX17-204ENST00000453453 HACD4Q5VWC8 232 aa14.48□□□□□ -0.09
SNX17-204ENST00000453453 ZNF836Q6ZNA1 936 aa14.48□□□□□ -0.09
SNX17-204ENST00000453453 ZAR1Q86SH2 424 aa14.48□□□□□ -0.09
SNX17-204ENST00000453453 GHDCQ8N2G8 530 aa14.48□□□□□ -0.09
SNX17-204ENST00000453453 OR52I1Q8NGK6 324 aa14.48□□□□□ -0.09
SNX17-204ENST00000453453 OR5H6Q8NGV6 325 aa14.48□□□□□ -0.09
SNX17-204ENST00000453453 AKAP1Q92667 903 aaKnown RBP eCLIP14.48□□□□□ -0.09
SNX17-204ENST00000453453 UFD1Q92890 307 aa14.48□□□□□ -0.09
SNX17-204ENST00000453453 ZG16BQ96DA0 208 aa14.48□□□□□ -0.09
SNX17-204ENST00000453453 LMF1Q96S06 567 aa14.48□□□□□ -0.09
SNX17-204ENST00000453453 ADOQ96SZ5 270 aa14.48□□□□□ -0.09
SNX17-204ENST00000453453 KCNJ15Q99712 375 aa14.48□□□□□ -0.09
SNX17-204ENST00000453453 FUZQ9BT04 418 aa14.48□□□□□ -0.09
SNX17-204ENST00000453453 TMEM43Q9BTV4 400 aa14.48□□□□□ -0.09
SNX17-204ENST00000453453 C12orf10Q9HB07 376 aa14.48□□□□□ -0.09
SNX17-204ENST00000453453 UBQLN4Q9NRR5 601 aa14.48□□□□□ -0.09
SNX17-204ENST00000453453 MYOTQ9UBF9 498 aa14.48□□□□□ -0.09
SNX17-204ENST00000453453 KLK13Q9UKR3 277 aa14.48□□□□□ -0.09
SNX17-204ENST00000453453 SF3B6Q9Y3B4 125 aaKnown RBP14.48□□□□□ -0.09
SNX17-204ENST00000453453 NPFFR2Q9Y5X5 522 aa14.48□□□□□ -0.09
SNX17-204ENST00000453453 DMXL1Q9Y485 3027 aa14.48□□□□□ -0.09
SNX17-204ENST00000453453 A0A0X1KG70 313 aa14.47□□□□□ -0.09
SNX17-204ENST00000453453 SCDO00767 359 aa14.47□□□□□ -0.09
SNX17-204ENST00000453453 LYRM1O43325 122 aa14.47□□□□□ -0.09
SNX17-204ENST00000453453 PRKYO43930 277 aa14.47□□□□□ -0.09
SNX17-204ENST00000453453 PPM1BO75688 479 aa14.47□□□□□ -0.09
SNX17-204ENST00000453453 UTS2O95399 124 aa14.47□□□□□ -0.09
SNX17-204ENST00000453453 H1F0P07305 194 aaKnown RBP14.47□□□□□ -0.09
SNX17-204ENST00000453453 LIFP15018 202 aa14.47□□□□□ -0.09
SNX17-204ENST00000453453 NAGAP17050 411 aa14.47□□□□□ -0.09
SNX17-204ENST00000453453 TGIF1Q15583 401 aa14.47□□□□□ -0.09
SNX17-204ENST00000453453 LIPKQ5VXJ0 399 aa14.47□□□□□ -0.09
SNX17-204ENST00000453453 CMIPQ8IY22 773 aa14.47□□□□□ -0.09
SNX17-204ENST00000453453 ACOT12Q8WYK0 555 aa14.47□□□□□ -0.09
SNX17-204ENST00000453453 IL4I1Q96RQ9 567 aa14.47□□□□□ -0.09
SNX17-204ENST00000453453 KATNB1Q9BVA0 655 aa14.47□□□□□ -0.09
SNX17-204ENST00000453453 POLR2J3Q9H1A7 115 aaKnown RBP14.47□□□□□ -0.09
SNX17-204ENST00000453453 POLHQ9Y253 713 aa14.47□□□□□ -0.09
SNX17-204ENST00000453453 EXPH5Q8NEV8 1989 aa14.46□□□□□ -0.09
SNX17-204ENST00000453453 FAM240BA0A1B0GVZ2 78 aa14.46□□□□□ -0.09
SNX17-204ENST00000453453 TSPAN2O60636 221 aa14.46□□□□□ -0.09
SNX17-204ENST00000453453 SERPINA7P05543 415 aa14.46□□□□□ -0.09
SNX17-204ENST00000453453 POU2F1P14859 743 aa14.46□□□□□ -0.09
SNX17-204ENST00000453453 POU1F1P28069 291 aa14.46□□□□□ -0.09
SNX17-204ENST00000453453 RGS8P57771 180 aaPredicted RBP14.46□□□□□ -0.09
SNX17-204ENST00000453453 EEF1A1P68104 462 aaKnown RBP14.46□□□□□ -0.09
SNX17-204ENST00000453453 MAPK14Q16539 360 aa14.46□□□□□ -0.09
SNX17-204ENST00000453453 TCTN3Q6NUS6 607 aa14.46□□□□□ -0.09
SNX17-204ENST00000453453 PGBD2Q6P3X8 592 aa14.46□□□□□ -0.09
SNX17-204ENST00000453453 Q8N402 240 aa14.46□□□□□ -0.09
SNX17-204ENST00000453453 ADAMTS17Q8TE56 1095 aa14.46□□□□□ -0.09
SNX17-204ENST00000453453 FER1L6-AS2Q96M78 137 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms