RNA–Protein interactions for RNA: ENST00000452047.1

CPSF4-208, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 3

Gene CPSF4, Length 687 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-208ENST00000452047 TMEM38AQ9H6F2 299 aa10.94□□□□□ -0.66
CPSF4-208ENST00000452047 VIPAS39Q9H9C1 493 aa10.94□□□□□ -0.66
CPSF4-208ENST00000452047 C12orf10Q9HB07 376 aa10.94□□□□□ -0.66
CPSF4-208ENST00000452047 SLC17A5Q9NRA2 495 aa10.94□□□□□ -0.66
CPSF4-208ENST00000452047 MGAT4BQ9UQ53 548 aa10.94□□□□□ -0.66
CPSF4-208ENST00000452047 HEATR1Q9H583 2144 aaKnown RBP10.94□□□□□ -0.66
CPSF4-208ENST00000452047 ABCA2Q9BZC7 2435 aa10.94□□□□□ -0.66
CPSF4-208ENST00000452047 E7EQL1 145 aa10.93□□□□□ -0.66
CPSF4-208ENST00000452047 TPST1O60507 370 aa10.93□□□□□ -0.66
CPSF4-208ENST00000452047 AHSA1O95433 338 aa10.93□□□□□ -0.66
CPSF4-208ENST00000452047 IGHV4-39P01824 125 aa10.93□□□□□ -0.66
CPSF4-208ENST00000452047 PNMTP11086 282 aa10.93□□□□□ -0.66
CPSF4-208ENST00000452047 H2AFXP16104 143 aaPredicted RBP10.93□□□□□ -0.66
CPSF4-208ENST00000452047 SELENOPP49908 381 aa10.93□□□□□ -0.66
CPSF4-208ENST00000452047 TGFBR3Q03167 851 aa10.93□□□□□ -0.66
CPSF4-208ENST00000452047 CLEC12BQ2HXU8 276 aa10.93□□□□□ -0.66
CPSF4-208ENST00000452047 C1QTNF12Q5T7M4 302 aa10.93□□□□□ -0.66
CPSF4-208ENST00000452047 TMEM225Q6GV28 225 aa10.93□□□□□ -0.66
CPSF4-208ENST00000452047 C11orf71Q6IPW1 123 aa10.93□□□□□ -0.66
CPSF4-208ENST00000452047 B3GLCTQ6Y288 498 aa10.93□□□□□ -0.66
CPSF4-208ENST00000452047 DNM1P46Q6ZS02 220 aa10.93□□□□□ -0.66
CPSF4-208ENST00000452047 HDXQ7Z353 690 aa10.93□□□□□ -0.66
CPSF4-208ENST00000452047 KRT73Q86Y46 540 aa10.93□□□□□ -0.66
CPSF4-208ENST00000452047 EPHX4Q8IUS5 362 aa10.93□□□□□ -0.66
CPSF4-208ENST00000452047 PIAS4Q8N2W9 510 aaPredicted RBP10.93□□□□□ -0.66
CPSF4-208ENST00000452047 GTPBP3Q969Y2 492 aaKnown RBP10.93□□□□□ -0.66
CPSF4-208ENST00000452047 KTI12Q96EK9 354 aaPredicted RBP10.93□□□□□ -0.66
CPSF4-208ENST00000452047 MAGEB18Q96M61 343 aa10.93□□□□□ -0.66
CPSF4-208ENST00000452047 FAIMQ9NVQ4 179 aa10.93□□□□□ -0.66
CPSF4-208ENST00000452047 SEC14L4Q9UDX3 406 aa10.93□□□□□ -0.66
CPSF4-208ENST00000452047 CORO2BQ9UQ03 480 aa10.93□□□□□ -0.66
CPSF4-208ENST00000452047 RASD1Q9Y272 281 aa10.93□□□□□ -0.66
CPSF4-208ENST00000452047 AMDHD2Q9Y303 409 aa10.93□□□□□ -0.66
CPSF4-208ENST00000452047 JMJD1CQ15652 2540 aa10.92□□□□□ -0.66
CPSF4-208ENST00000452047 IGKV1D-42A0A075B6H8 117 aa10.92□□□□□ -0.66
CPSF4-208ENST00000452047 A0A1B0GWA3 101 aa10.92□□□□□ -0.66
CPSF4-208ENST00000452047 ELOA3DA6NLF2 546 aaPredicted RBP10.92□□□□□ -0.66
CPSF4-208ENST00000452047 M0R1B8 84 aa10.92□□□□□ -0.66
CPSF4-208ENST00000452047 NDUFS7O75251 213 aa10.92□□□□□ -0.66
CPSF4-208ENST00000452047 SLC6A2P23975 617 aa10.92□□□□□ -0.66
CPSF4-208ENST00000452047 ACVR1BP36896 505 aa10.92□□□□□ -0.66
CPSF4-208ENST00000452047 RPS5P46782 204 aaKnown RBP10.92□□□□□ -0.66
CPSF4-208ENST00000452047 KRTAP1-1Q07627 177 aa10.92□□□□□ -0.66
CPSF4-208ENST00000452047 LGALS3BPQ08380 585 aa10.92□□□□□ -0.66
CPSF4-208ENST00000452047 SCARB2Q14108 478 aa10.92□□□□□ -0.66
CPSF4-208ENST00000452047 VEZF1Q14119 521 aa10.92□□□□□ -0.66
CPSF4-208ENST00000452047 ELOA3BQ3SY89 546 aa10.92□□□□□ -0.66
CPSF4-208ENST00000452047 RUNDC3AQ59EK9 446 aa10.92□□□□□ -0.66
CPSF4-208ENST00000452047 SLC22A25Q6T423 547 aa10.92□□□□□ -0.66
CPSF4-208ENST00000452047 LINGO2Q7L985 606 aa10.92□□□□□ -0.66
CPSF4-208ENST00000452047 DPP10Q8N608 796 aa10.92□□□□□ -0.66
CPSF4-208ENST00000452047 ELOA3Q8NG57 546 aa10.92□□□□□ -0.66
CPSF4-208ENST00000452047 THOC1Q96FV9 657 aaKnown RBP10.92□□□□□ -0.66
CPSF4-208ENST00000452047 ALKBH3Q96Q83 286 aaPredicted RBP10.92□□□□□ -0.66
CPSF4-208ENST00000452047 DHRS9Q9BPW9 319 aa10.92□□□□□ -0.66
CPSF4-208ENST00000452047 WFDC6Q9BQY6 131 aa10.92□□□□□ -0.66
CPSF4-208ENST00000452047 SPATA5L1Q9BVQ7 753 aa10.92□□□□□ -0.66
CPSF4-208ENST00000452047 PRR14Q9BWN1 585 aa10.92□□□□□ -0.66
CPSF4-208ENST00000452047 C1QTNF6Q9BXI9 259 aa10.92□□□□□ -0.66
CPSF4-208ENST00000452047 ALG2Q9H553 416 aa10.92□□□□□ -0.66
CPSF4-208ENST00000452047 RABEP2Q9H5N1 569 aa10.92□□□□□ -0.66
CPSF4-208ENST00000452047 B3GAT1Q9P2W7 334 aa10.92□□□□□ -0.66
CPSF4-208ENST00000452047 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.92□□□□□ -0.66
CPSF4-208ENST00000452047 GDF2Q9UK05 429 aaPredicted RBP10.92□□□□□ -0.66
CPSF4-208ENST00000452047 EVPLLA8MZ36 301 aa10.91□□□□□ -0.66
CPSF4-208ENST00000452047 TPST2O60704 377 aa10.91□□□□□ -0.66
CPSF4-208ENST00000452047 EDF1O60869 148 aaKnown RBP10.91□□□□□ -0.66
CPSF4-208ENST00000452047 ZNF432O94892 652 aa10.91□□□□□ -0.66
CPSF4-208ENST00000452047 PTNP21246 168 aa10.91□□□□□ -0.66
CPSF4-208ENST00000452047 AQP1P29972 269 aa10.91□□□□□ -0.66
CPSF4-208ENST00000452047 TTKP33981 857 aa10.91□□□□□ -0.66
CPSF4-208ENST00000452047 PCBP3P57721 371 aaKnown RBP10.91□□□□□ -0.66
CPSF4-208ENST00000452047 DMTNQ08495 405 aa10.91□□□□□ -0.66
CPSF4-208ENST00000452047 HIKESHIQ53FT3 197 aa10.91□□□□□ -0.66
CPSF4-208ENST00000452047 ALG10BQ5I7T1 473 aa10.91□□□□□ -0.66
CPSF4-208ENST00000452047 FAM69AQ5T7M9 428 aa10.91□□□□□ -0.66
CPSF4-208ENST00000452047 AGAP6Q5VW22 663 aa10.91□□□□□ -0.66
CPSF4-208ENST00000452047 FAM91A1Q658Y4 838 aa10.91□□□□□ -0.66
CPSF4-208ENST00000452047 C5orf46Q6UWT4 87 aa10.91□□□□□ -0.66
CPSF4-208ENST00000452047 ABHD12BQ7Z5M8 362 aaPredicted RBP10.91□□□□□ -0.66
CPSF4-208ENST00000452047 DHDDSQ86SQ9 333 aa10.91□□□□□ -0.66
CPSF4-208ENST00000452047 RETREG3Q86VR2 466 aa10.91□□□□□ -0.66
CPSF4-208ENST00000452047 PTOV1Q86YD1 416 aa10.91□□□□□ -0.66
CPSF4-208ENST00000452047 KDM8Q8N371 416 aa10.91□□□□□ -0.66
CPSF4-208ENST00000452047 HIPK4Q8NE63 616 aa10.91□□□□□ -0.66
CPSF4-208ENST00000452047 DNAJA4Q8WW22 397 aaPredicted RBP10.91□□□□□ -0.66
CPSF4-208ENST00000452047 SLC38A4Q969I6 547 aa10.91□□□□□ -0.66
CPSF4-208ENST00000452047 TAAR8Q969N4 342 aa10.91□□□□□ -0.66
CPSF4-208ENST00000452047 SLC25A36Q96CQ1 311 aa10.91□□□□□ -0.66
CPSF4-208ENST00000452047 LINC00470Q9BZP3 86 aa10.91□□□□□ -0.66
CPSF4-208ENST00000452047 CBLN4Q9NTU7 201 aa10.91□□□□□ -0.66
CPSF4-208ENST00000452047 KLHL14Q9P2G3 628 aa10.91□□□□□ -0.66
CPSF4-208ENST00000452047 RPS6KB2Q9UBS0 482 aa10.91□□□□□ -0.66
CPSF4-208ENST00000452047 TESQ9UGI8 421 aaKnown RBP10.91□□□□□ -0.66
CPSF4-208ENST00000452047 LEF1Q9UJU2 399 aaPredicted RBP10.91□□□□□ -0.66
CPSF4-208ENST00000452047 POU2F3Q9UKI9 436 aa10.91□□□□□ -0.66
CPSF4-208ENST00000452047 RCE1Q9Y256 329 aa10.91□□□□□ -0.66
CPSF4-208ENST00000452047 B3GALT5Q9Y2C3 310 aa10.91□□□□□ -0.66
CPSF4-208ENST00000452047 CUBNO60494 3623 aa10.91□□□□□ -0.66
CPSF4-208ENST00000452047 ANK3Q12955 4377 aaKnown RBP10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms