RNA–Protein interactions for RNA: ENST00000452013.5

COL8A1-203, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 2

Gene COL8A1, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-203ENST00000452013 PAX7P23759 505 aa7.9□□□□□ -1.14
COL8A1-203ENST00000452013 SSTR2P30874 369 aa7.9□□□□□ -1.14
COL8A1-203ENST00000452013 RPS5P46782 204 aaKnown RBP7.9□□□□□ -1.14
COL8A1-203ENST00000452013 OR1E2P47887 323 aa7.9□□□□□ -1.14
COL8A1-203ENST00000452013 CHN2P52757 468 aa7.9□□□□□ -1.14
COL8A1-203ENST00000452013 CRYBA2P53672 197 aa7.9□□□□□ -1.14
COL8A1-203ENST00000452013 SLC16A1P53985 500 aa7.9□□□□□ -1.14
COL8A1-203ENST00000452013 TAS2R41P59536 307 aa7.9□□□□□ -1.14
COL8A1-203ENST00000452013 FAM27E3Q08E93 113 aa7.9□□□□□ -1.14
COL8A1-203ENST00000452013 TRIP10Q15642 601 aa7.9□□□□□ -1.14
COL8A1-203ENST00000452013 NPTX1Q15818 432 aa7.9□□□□□ -1.14
COL8A1-203ENST00000452013 EXOC3L2Q2M3D2 409 aa7.9□□□□□ -1.14
COL8A1-203ENST00000452013 IFI44LQ53G44 452 aa7.9□□□□□ -1.14
COL8A1-203ENST00000452013 FAM69AQ5T7M9 428 aa7.9□□□□□ -1.14
COL8A1-203ENST00000452013 ZNF474Q6S9Z5 364 aaPredicted RBP7.9□□□□□ -1.14
COL8A1-203ENST00000452013 LINC00114Q6XXX2 140 aa7.9□□□□□ -1.14
COL8A1-203ENST00000452013 NUFIP2Q7Z417 695 aaKnown RBP7.9□□□□□ -1.14
COL8A1-203ENST00000452013 CCDC103Q8IW40 242 aa7.9□□□□□ -1.14
COL8A1-203ENST00000452013 ZNF100Q8IYN0 542 aa7.9□□□□□ -1.14
COL8A1-203ENST00000452013 C10orf53Q8N6V4 93 aa7.9□□□□□ -1.14
COL8A1-203ENST00000452013 RNF148Q8N7C7 305 aa7.9□□□□□ -1.14
COL8A1-203ENST00000452013 TMEM99Q8N816 258 aa7.9□□□□□ -1.14
COL8A1-203ENST00000452013 OR4D11Q8NGI4 311 aa7.9□□□□□ -1.14
COL8A1-203ENST00000452013 ADAMTS16Q8TE57 1224 aa7.9□□□□□ -1.14
COL8A1-203ENST00000452013 FAM222BQ8WU58 562 aa7.9□□□□□ -1.14
COL8A1-203ENST00000452013 ZNF775Q96BV0 537 aaPredicted RBP7.9□□□□□ -1.14
COL8A1-203ENST00000452013 KTI12Q96EK9 354 aaPredicted RBP7.9□□□□□ -1.14
COL8A1-203ENST00000452013 SLC41A3Q96GZ6 507 aa7.9□□□□□ -1.14
COL8A1-203ENST00000452013 CLPTM1LQ96KA5 538 aa7.9□□□□□ -1.14
COL8A1-203ENST00000452013 HS6ST2Q96MM7 605 aa7.9□□□□□ -1.14
COL8A1-203ENST00000452013 SH3GL3Q99963 347 aa7.9□□□□□ -1.14
COL8A1-203ENST00000452013 USB1Q9BQ65 265 aaKnown RBP7.9□□□□□ -1.14
COL8A1-203ENST00000452013 TMEM43Q9BTV4 400 aa7.9□□□□□ -1.14
COL8A1-203ENST00000452013 C12orf49Q9H741 205 aa7.9□□□□□ -1.14
COL8A1-203ENST00000452013 GORASP2Q9H8Y8 452 aa7.9□□□□□ -1.14
COL8A1-203ENST00000452013 GALNT8Q9NY28 637 aa7.9□□□□□ -1.14
COL8A1-203ENST00000452013 GMPR2Q9P2T1 348 aaKnown RBP7.9□□□□□ -1.14
COL8A1-203ENST00000452013 CD300AQ9UGN4 299 aa7.9□□□□□ -1.14
COL8A1-203ENST00000452013 EGFL7Q9UHF1 273 aa7.9□□□□□ -1.14
COL8A1-203ENST00000452013 MAGEL2Q9UJ55 1249 aa7.9□□□□□ -1.14
COL8A1-203ENST00000452013 RIMS3Q9UJD0 308 aa7.9□□□□□ -1.14
COL8A1-203ENST00000452013 SAMD4AQ9UPU9 718 aaKnown RBP7.9□□□□□ -1.14
COL8A1-203ENST00000452013 GPR52Q9Y2T5 361 aa7.9□□□□□ -1.14
COL8A1-203ENST00000452013 NOSIPQ9Y314 301 aaKnown RBP7.9□□□□□ -1.14
COL8A1-203ENST00000452013 CORINQ9Y5Q5 1042 aa7.9□□□□□ -1.14
COL8A1-203ENST00000452013 COMMD3-BMI1R4GMX3 469 aa7.9□□□□□ -1.14
COL8A1-203ENST00000452013 FASNP49327 2511 aaKnown RBP7.89□□□□□ -1.15
COL8A1-203ENST00000452013 HTR3EA5X5Y0 456 aa7.89□□□□□ -1.15
COL8A1-203ENST00000452013 AQP7P3A6NL99 342 aa7.89□□□□□ -1.15
COL8A1-203ENST00000452013 ZNF716A6NP11 495 aa7.89□□□□□ -1.15
COL8A1-203ENST00000452013 H3BNX3 289 aa7.89□□□□□ -1.15
COL8A1-203ENST00000452013 TNFAIP8O95379 198 aa7.89□□□□□ -1.15
COL8A1-203ENST00000452013 CNOT4O95628 575 aaKnown RBP7.89□□□□□ -1.15
COL8A1-203ENST00000452013 MT-ATP6P00846 226 aa7.89□□□□□ -1.15
COL8A1-203ENST00000452013 HIST1H2ABP04908 130 aa7.89□□□□□ -1.15
COL8A1-203ENST00000452013 EPXP11678 715 aa7.89□□□□□ -1.15
COL8A1-203ENST00000452013 NCK1P16333 377 aa7.89□□□□□ -1.15
COL8A1-203ENST00000452013 HOXB6P17509 224 aaKnown RBP7.89□□□□□ -1.15
COL8A1-203ENST00000452013 TCN1P20061 433 aaPredicted RBP7.89□□□□□ -1.15
COL8A1-203ENST00000452013 TNFRSF1BP20333 461 aa7.89□□□□□ -1.15
COL8A1-203ENST00000452013 OR3A2P47893 321 aa7.89□□□□□ -1.15
COL8A1-203ENST00000452013 EGR4Q05215 589 aa7.89□□□□□ -1.15
COL8A1-203ENST00000452013 ST3GAL3Q11203 375 aa7.89□□□□□ -1.15
COL8A1-203ENST00000452013 TRIM25Q14258 630 aaKnown RBP7.89□□□□□ -1.15
COL8A1-203ENST00000452013 SLC17A1Q14916 467 aa7.89□□□□□ -1.15
COL8A1-203ENST00000452013 P2RY6Q15077 328 aa7.89□□□□□ -1.15
COL8A1-203ENST00000452013 ABLIM2Q6H8Q1 611 aa7.89□□□□□ -1.15
COL8A1-203ENST00000452013 DEF8Q6ZN54 512 aa7.89□□□□□ -1.15
COL8A1-203ENST00000452013 H1FNTQ75WM6 255 aaPredicted RBP7.89□□□□□ -1.15
COL8A1-203ENST00000452013 HIST3H2AQ7L7L0 130 aa7.89□□□□□ -1.15
COL8A1-203ENST00000452013 GDF7Q7Z4P5 450 aa7.89□□□□□ -1.15
COL8A1-203ENST00000452013 CYP4Z1Q86W10 505 aa7.89□□□□□ -1.15
COL8A1-203ENST00000452013 PACRGLQ8N7B6 248 aa7.89□□□□□ -1.15
COL8A1-203ENST00000452013 PYDC1Q8WXC3 89 aa7.89□□□□□ -1.15
COL8A1-203ENST00000452013 GEMIN6Q8WXD5 167 aaKnown RBP7.89□□□□□ -1.15
COL8A1-203ENST00000452013 HIST1H2ACQ93077 130 aa7.89□□□□□ -1.15
COL8A1-203ENST00000452013 TAAR8Q969N4 342 aa7.89□□□□□ -1.15
COL8A1-203ENST00000452013 C14orf79Q96F83 325 aa7.89□□□□□ -1.15
COL8A1-203ENST00000452013 DACH2Q96NX9 599 aa7.89□□□□□ -1.15
COL8A1-203ENST00000452013 OXGR1Q96P68 337 aa7.89□□□□□ -1.15
COL8A1-203ENST00000452013 ZNF300Q96RE9 604 aaPredicted RBP7.89□□□□□ -1.15
COL8A1-203ENST00000452013 ASPNQ9BXN1 380 aa7.89□□□□□ -1.15
COL8A1-203ENST00000452013 SLC19A3Q9BZV2 496 aa7.89□□□□□ -1.15
COL8A1-203ENST00000452013 OR10A4Q9H209 315 aa7.89□□□□□ -1.15
COL8A1-203ENST00000452013 PAPOLBQ9NRJ5 636 aaKnown RBP7.89□□□□□ -1.15
COL8A1-203ENST00000452013 DCAF13Q9NV06 445 aaKnown RBP7.89□□□□□ -1.15
COL8A1-203ENST00000452013 ING1Q9UK53 422 aaPredicted RBP7.89□□□□□ -1.15
COL8A1-203ENST00000452013 SLC7A7Q9UM01 511 aa7.89□□□□□ -1.15
COL8A1-203ENST00000452013 B3GALT5Q9Y2C3 310 aa7.89□□□□□ -1.15
COL8A1-203ENST00000452013 FAM32AQ9Y421 112 aaKnown RBP7.89□□□□□ -1.15
COL8A1-203ENST00000452013 IGKV1D-42A0A075B6H8 117 aa7.88□□□□□ -1.15
COL8A1-203ENST00000452013 LOC102725191A0A1B0GVB3 256 aa7.88□□□□□ -1.15
COL8A1-203ENST00000452013 AQP12BA6NM10 295 aa7.88□□□□□ -1.15
COL8A1-203ENST00000452013 ZNF814B7Z6K7 855 aa7.88□□□□□ -1.15
COL8A1-203ENST00000452013 FTCDNL1E5RQL4 147 aa7.88□□□□□ -1.15
COL8A1-203ENST00000452013 OR6A2O95222 327 aa7.88□□□□□ -1.15
COL8A1-203ENST00000452013 GOSR1O95249 250 aa7.88□□□□□ -1.15
COL8A1-203ENST00000452013 FCGR1AP12314 374 aa7.88□□□□□ -1.15
COL8A1-203ENST00000452013 PPP3CBP16298 524 aa7.88□□□□□ -1.15
COL8A1-203ENST00000452013 ZNF43P17038 809 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms