RNA–Protein interactions for RNA: ENST00000450066.6

USP39-207, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2 BASIC

Gene USP39, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-207ENST00000450066 DDIT4LQ96D03 193 aa12.89□□□□□ -0.35
USP39-207ENST00000450066 TSC22D3Q99576 134 aa12.89□□□□□ -0.35
USP39-207ENST00000450066 OR11A1Q9GZK7 315 aa12.89□□□□□ -0.35
USP39-207ENST00000450066 CXorf56Q9H5V9 222 aa12.89□□□□□ -0.35
USP39-207ENST00000450066 CLEC2DQ9UHP7 191 aa12.89□□□□□ -0.35
USP39-207ENST00000450066 ENPP5Q9UJA9 477 aa12.89□□□□□ -0.35
USP39-207ENST00000450066 LSM2Q9Y333 95 aaKnown RBP12.89□□□□□ -0.35
USP39-207ENST00000450066 CNOT1A5YKK6 2376 aaKnown RBP12.89□□□□□ -0.35
USP39-207ENST00000450066 A0A087WZY1 265 aa12.89□□□□□ -0.35
USP39-207ENST00000450066 TRIM64BA6NI03 449 aa12.89□□□□□ -0.35
USP39-207ENST00000450066 M0R082 166 aa12.89□□□□□ -0.35
USP39-207ENST00000450066 TXNDC12O95881 172 aa12.89□□□□□ -0.35
USP39-207ENST00000450066 MYL12AP19105 171 aa12.89□□□□□ -0.35
USP39-207ENST00000450066 SLC2A5P22732 501 aa12.89□□□□□ -0.35
USP39-207ENST00000450066 EIF1P41567 113 aaKnown RBP12.89□□□□□ -0.35
USP39-207ENST00000450066 KHDRBS1Q07666 443 aaKnown RBP eCLIP12.89□□□□□ -0.35
USP39-207ENST00000450066 MED22Q15528 200 aa12.89□□□□□ -0.35
USP39-207ENST00000450066 SLC16A12Q6ZSM3 486 aa12.89□□□□□ -0.35
USP39-207ENST00000450066 TMPRSS7Q7RTY8 843 aa12.89□□□□□ -0.35
USP39-207ENST00000450066 FAM122BQ7Z309 247 aa12.89□□□□□ -0.35
USP39-207ENST00000450066 MDGA2Q7Z553 956 aa12.89□□□□□ -0.35
USP39-207ENST00000450066 CYB561A3Q8NBI2 242 aa12.89□□□□□ -0.35
USP39-207ENST00000450066 OR5J2Q8NH18 312 aa12.89□□□□□ -0.35
USP39-207ENST00000450066 POC1BQ8TC44 478 aa12.89□□□□□ -0.35
USP39-207ENST00000450066 SLC25A36Q96CQ1 311 aa12.89□□□□□ -0.35
USP39-207ENST00000450066 OR5M11Q96RB7 305 aa12.89□□□□□ -0.35
USP39-207ENST00000450066 TEAD3Q99594 435 aa12.89□□□□□ -0.35
USP39-207ENST00000450066 BCL7BQ9BQE9 202 aa12.89□□□□□ -0.35
USP39-207ENST00000450066 KLHL1Q9NR64 748 aa12.89□□□□□ -0.35
USP39-207ENST00000450066 TAS2R5Q9NYW4 299 aa12.89□□□□□ -0.35
USP39-207ENST00000450066 TEKT2Q9UIF3 430 aa12.89□□□□□ -0.35
USP39-207ENST00000450066 EXOSC1Q9Y3B2 195 aaKnown RBP12.89□□□□□ -0.35
USP39-207ENST00000450066 FTCDNL1E5RQL4 147 aa12.88□□□□□ -0.35
USP39-207ENST00000450066 SNPHO15079 494 aa12.88□□□□□ -0.35
USP39-207ENST00000450066 DXOO77932 396 aaKnown RBP12.88□□□□□ -0.35
USP39-207ENST00000450066 APOL3O95236 402 aa12.88□□□□□ -0.35
USP39-207ENST00000450066 ADH6P28332 368 aa12.88□□□□□ -0.35
USP39-207ENST00000450066 ATP6V1E1P36543 226 aa12.88□□□□□ -0.35
USP39-207ENST00000450066 LIPAP38571 399 aa12.88□□□□□ -0.35
USP39-207ENST00000450066 ETV1P50549 477 aa12.88□□□□□ -0.35
USP39-207ENST00000450066 CTXN1P60606 82 aa12.88□□□□□ -0.35
USP39-207ENST00000450066 MFSD13AQ14CX5 517 aa12.88□□□□□ -0.35
USP39-207ENST00000450066 EMC4Q5J8M3 183 aa12.88□□□□□ -0.35
USP39-207ENST00000450066 ERI1Q8IV48 349 aaKnown RBP12.88□□□□□ -0.35
USP39-207ENST00000450066 NPEPL1Q8NDH3 523 aa12.88□□□□□ -0.35
USP39-207ENST00000450066 SDR9C7Q8NEX9 313 aa12.88□□□□□ -0.35
USP39-207ENST00000450066 KISS1RQ969F8 398 aaPredicted RBP12.88□□□□□ -0.35
USP39-207ENST00000450066 ZBTB8AQ96BR9 441 aa12.88□□□□□ -0.35
USP39-207ENST00000450066 MGLLQ99685 303 aa12.88□□□□□ -0.35
USP39-207ENST00000450066 JAM3Q9BX67 310 aa12.88□□□□□ -0.35
USP39-207ENST00000450066 POTEKPQ9BYX7 375 aa12.88□□□□□ -0.35
USP39-207ENST00000450066 RACGAP1Q9H0H5 632 aa12.88□□□□□ -0.35
USP39-207ENST00000450066 SERINC1Q9NRX5 453 aa12.88□□□□□ -0.35
USP39-207ENST00000450066 CHCHD3Q9NX63 227 aaKnown RBP12.88□□□□□ -0.35
USP39-207ENST00000450066 TMEM129A0AVI4 362 aa12.87□□□□□ -0.35
USP39-207ENST00000450066 J3QRE1 110 aa12.87□□□□□ -0.35
USP39-207ENST00000450066 MYL12BO14950 172 aa12.87□□□□□ -0.35
USP39-207ENST00000450066 EFNA2O43921 213 aa12.87□□□□□ -0.35
USP39-207ENST00000450066 GABARAPO95166 117 aa12.87□□□□□ -0.35
USP39-207ENST00000450066 IGHA1P01876 353 aa12.87□□□□□ -0.35
USP39-207ENST00000450066 F13BP05160 661 aa12.87□□□□□ -0.35
USP39-207ENST00000450066 CD36P16671 472 aa12.87□□□□□ -0.35
USP39-207ENST00000450066 PCSK6P29122 969 aa12.87□□□□□ -0.35
USP39-207ENST00000450066 GRPRP30550 384 aa12.87□□□□□ -0.35
USP39-207ENST00000450066 SDHAP31040 664 aa12.87□□□□□ -0.35
USP39-207ENST00000450066 TGFBR2P37173 567 aa12.87□□□□□ -0.35
USP39-207ENST00000450066 CYB561P49447 251 aa12.87□□□□□ -0.35
USP39-207ENST00000450066 AIMP2Q13155 320 aaKnown RBP12.87□□□□□ -0.35
USP39-207ENST00000450066 SPHARQ15513 63 aa12.87□□□□□ -0.35
USP39-207ENST00000450066 CTF1Q16619 201 aa12.87□□□□□ -0.35
USP39-207ENST00000450066 KLHL12Q53G59 568 aa12.87□□□□□ -0.35
USP39-207ENST00000450066 ARMCX4Q5H9R4 360 aa12.87□□□□□ -0.35
USP39-207ENST00000450066 P2RY8Q86VZ1 359 aa12.87□□□□□ -0.35
USP39-207ENST00000450066 BEST3Q8N1M1 668 aa12.87□□□□□ -0.35
USP39-207ENST00000450066 OR4F15Q8NGB8 312 aa12.87□□□□□ -0.35
USP39-207ENST00000450066 MFSD8Q8NHS3 518 aa12.87□□□□□ -0.35
USP39-207ENST00000450066 TMEM41AQ96HV5 264 aa12.87□□□□□ -0.35
USP39-207ENST00000450066 FER1L6-AS2Q96M78 137 aa12.87□□□□□ -0.35
USP39-207ENST00000450066 DDOQ99489 341 aa12.87□□□□□ -0.35
USP39-207ENST00000450066 ASPNQ9BXN1 380 aa12.87□□□□□ -0.35
USP39-207ENST00000450066 OR51V1Q9H2C8 321 aa12.87□□□□□ -0.35
USP39-207ENST00000450066 MRPL39Q9NYK5 338 aaKnown RBP12.87□□□□□ -0.35
USP39-207ENST00000450066 HAO2Q9NYQ3 351 aa12.87□□□□□ -0.35
USP39-207ENST00000450066 STMN3Q9NZ72 180 aa12.87□□□□□ -0.35
USP39-207ENST00000450066 CORINQ9Y5Q5 1042 aa12.87□□□□□ -0.35
USP39-207ENST00000450066 SPIN1Q9Y657 262 aaPredicted RBP12.87□□□□□ -0.35
USP39-207ENST00000450066 TEX13CA0A0J9YWL9 993 aa12.87□□□□□ -0.35
USP39-207ENST00000450066 CCDC182A6NF36 153 aa12.87□□□□□ -0.35
USP39-207ENST00000450066 SHISA8B8ZZ34 492 aa12.87□□□□□ -0.35
USP39-207ENST00000450066 ATE1O95260 518 aa12.87□□□□□ -0.35
USP39-207ENST00000450066 P04436 131 aa12.87□□□□□ -0.35
USP39-207ENST00000450066 HSMCR30P0CW71 290 aa12.87□□□□□ -0.35
USP39-207ENST00000450066 LIFP15018 202 aa12.87□□□□□ -0.35
USP39-207ENST00000450066 FKBP2P26885 142 aaKnown RBP12.87□□□□□ -0.35
USP39-207ENST00000450066 C1DQ13901 141 aaKnown RBP12.87□□□□□ -0.35
USP39-207ENST00000450066 TGIF1Q15583 401 aa12.87□□□□□ -0.35
USP39-207ENST00000450066 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.87□□□□□ -0.356e-7■□□□□ 9.1
USP39-207ENST00000450066 SLC6A19Q695T7 634 aa12.87□□□□□ -0.35
USP39-207ENST00000450066 TIGD3Q6B0B8 471 aa12.87□□□□□ -0.35
USP39-207ENST00000450066 GPR139Q6DWJ6 353 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms