RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 SLC25A36Q96CQ1 311 aa12.92□□□□□ -0.34
USP39-206ENST00000448971 SLC47A1Q96FL8 570 aa12.92□□□□□ -0.34
USP39-206ENST00000448971 ZC3HAV1LQ96H79 300 aaKnown RBP12.92□□□□□ -0.34
USP39-206ENST00000448971 C18orf12Q96KH6 178 aa12.92□□□□□ -0.34
USP39-206ENST00000448971 DACH2Q96NX9 599 aa12.92□□□□□ -0.34
USP39-206ENST00000448971 LRRC37BQ96QE4 947 aa12.92□□□□□ -0.34
USP39-206ENST00000448971 HOPXQ9BPY8 73 aaPredicted RBP12.92□□□□□ -0.34
USP39-206ENST00000448971 WFDC6Q9BQY6 131 aa12.92□□□□□ -0.34
USP39-206ENST00000448971 ALG2Q9H553 416 aa12.92□□□□□ -0.34
USP39-206ENST00000448971 ING1Q9UK53 422 aaPredicted RBP12.92□□□□□ -0.34
USP39-206ENST00000448971 BAG5Q9UL15 447 aa12.92□□□□□ -0.34
USP39-206ENST00000448971 TESMINQ9Y4I5 508 aa12.92□□□□□ -0.34
USP39-206ENST00000448971 IGKV3D-15A0A087WSY6 115 aa12.91□□□□□ -0.34
USP39-206ENST00000448971 ZNF716A6NP11 495 aa12.91□□□□□ -0.34
USP39-206ENST00000448971 NME4O00746 187 aa12.91□□□□□ -0.34
USP39-206ENST00000448971 NDUFAB1O14561 156 aa12.91□□□□□ -0.34
USP39-206ENST00000448971 CASKO14936 926 aa12.91□□□□□ -0.34
USP39-206ENST00000448971 GSTA4O15217 222 aa12.91□□□□□ -0.34
USP39-206ENST00000448971 FMO6PO60774 539 aa12.91□□□□□ -0.34
USP39-206ENST00000448971 CRYBA2P53672 197 aa12.91□□□□□ -0.34
USP39-206ENST00000448971 KEAP1Q14145 624 aa12.91□□□□□ -0.34
USP39-206ENST00000448971 PDK3Q15120 406 aa12.91□□□□□ -0.34
USP39-206ENST00000448971 ENTPD8Q5MY95 495 aa12.91□□□□□ -0.34
USP39-206ENST00000448971 GKAP1Q5VSY0 366 aaPredicted RBP12.91□□□□□ -0.34
USP39-206ENST00000448971 ANKRD34AQ69YU3 496 aa12.91□□□□□ -0.34
USP39-206ENST00000448971 CASP12Q6UXS9 341 aa12.91□□□□□ -0.34
USP39-206ENST00000448971 GPAT4Q86UL3 456 aa12.91□□□□□ -0.34
USP39-206ENST00000448971 SLC15A3Q8IY34 581 aa12.91□□□□□ -0.34
USP39-206ENST00000448971 APH1AQ96BI3 265 aa12.91□□□□□ -0.34
USP39-206ENST00000448971 ZNF226Q9NYT6 803 aa12.91□□□□□ -0.34
USP39-206ENST00000448971 PRSS50Q9UI38 385 aa12.91□□□□□ -0.34
USP39-206ENST00000448971 SH3GLB1Q9Y371 365 aa12.91□□□□□ -0.34
USP39-206ENST00000448971 AQP7P3A6NL99 342 aa12.9□□□□□ -0.34
USP39-206ENST00000448971 CHP2O43745 196 aa12.9□□□□□ -0.34
USP39-206ENST00000448971 TPST2O60704 377 aa12.9□□□□□ -0.34
USP39-206ENST00000448971 NPIPB7O75200 414 aa12.9□□□□□ -0.34
USP39-206ENST00000448971 INHBBP09529 407 aa12.9□□□□□ -0.34
USP39-206ENST00000448971 TNFRSF1BP20333 461 aa12.9□□□□□ -0.34
USP39-206ENST00000448971 IL32P24001 234 aa12.9□□□□□ -0.34
USP39-206ENST00000448971 OR3A2P47893 321 aa12.9□□□□□ -0.34
USP39-206ENST00000448971 PCYT1AP49585 367 aa12.9□□□□□ -0.34
USP39-206ENST00000448971 SLC16A1P53985 500 aa12.9□□□□□ -0.34
USP39-206ENST00000448971 CDH12P55289 794 aa12.9□□□□□ -0.34
USP39-206ENST00000448971 PSME3P61289 254 aa12.9□□□□□ -0.34
USP39-206ENST00000448971 MXRA7P84157 204 aa12.9□□□□□ -0.34
USP39-206ENST00000448971 EGR4Q05215 589 aa12.9□□□□□ -0.34
USP39-206ENST00000448971 POU4F3Q15319 338 aa12.9□□□□□ -0.34
USP39-206ENST00000448971 NPTX1Q15818 432 aa12.9□□□□□ -0.34
USP39-206ENST00000448971 FAM69AQ5T7M9 428 aa12.9□□□□□ -0.34
USP39-206ENST00000448971 ZNF613Q6PF04 617 aa12.9□□□□□ -0.34
USP39-206ENST00000448971 STAC2Q6ZMT1 411 aa12.9□□□□□ -0.34
USP39-206ENST00000448971 DEF8Q6ZN54 512 aa12.9□□□□□ -0.34
USP39-206ENST00000448971 PIGWQ7Z7B1 504 aa12.9□□□□□ -0.34
USP39-206ENST00000448971 CXorf67Q86X51 503 aaPredicted RBP12.9□□□□□ -0.34
USP39-206ENST00000448971 CARM1Q86X55 608 aa12.9□□□□□ -0.34
USP39-206ENST00000448971 RBM45Q8IUH3 476 aaKnown RBP12.9□□□□□ -0.34
USP39-206ENST00000448971 P3H2Q8IVL5 708 aa12.9□□□□□ -0.34
USP39-206ENST00000448971 UBE2J2Q8N2K1 259 aa12.9□□□□□ -0.34
USP39-206ENST00000448971 TMEM99Q8N816 258 aa12.9□□□□□ -0.34
USP39-206ENST00000448971 OR4D11Q8NGI4 311 aa12.9□□□□□ -0.34
USP39-206ENST00000448971 MFSD8Q8NHS3 518 aa12.9□□□□□ -0.34
USP39-206ENST00000448971 ADAMTS16Q8TE57 1224 aa12.9□□□□□ -0.34
USP39-206ENST00000448971 KTI12Q96EK9 354 aaPredicted RBP12.9□□□□□ -0.34
USP39-206ENST00000448971 TPD52L3Q96J77 140 aa12.9□□□□□ -0.34
USP39-206ENST00000448971 EPYCQ99645 322 aa12.9□□□□□ -0.34
USP39-206ENST00000448971 KCTD14Q9BQ13 255 aaPredicted RBP12.9□□□□□ -0.34
USP39-206ENST00000448971 PTDSS2Q9BVG9 487 aa12.9□□□□□ -0.34
USP39-206ENST00000448971 ACTR6Q9GZN1 396 aa12.9□□□□□ -0.34
USP39-206ENST00000448971 SPAG4Q9NPE6 437 aa12.9□□□□□ -0.34
USP39-206ENST00000448971 GMPR2Q9P2T1 348 aaKnown RBP12.9□□□□□ -0.34
USP39-206ENST00000448971 ATRQ13535 2644 aa12.89□□□□□ -0.35
USP39-206ENST00000448971 IGKV1D-42A0A075B6H8 117 aa12.89□□□□□ -0.35
USP39-206ENST00000448971 TRAV36DV7A0A075B6V5 113 aa12.89□□□□□ -0.35
USP39-206ENST00000448971 A0A087WUJ7 227 aa12.89□□□□□ -0.35
USP39-206ENST00000448971 A0A1W2PPR1 153 aa12.89□□□□□ -0.35
USP39-206ENST00000448971 CXCR6O00574 342 aa12.89□□□□□ -0.35
USP39-206ENST00000448971 OR2T1O43869 369 aa12.89□□□□□ -0.35
USP39-206ENST00000448971 MRPL33O75394 65 aaKnown RBP12.89□□□□□ -0.35
USP39-206ENST00000448971 GOSR1O95249 250 aa12.89□□□□□ -0.35
USP39-206ENST00000448971 FAM107AO95990 144 aa12.89□□□□□ -0.35
USP39-206ENST00000448971 ADAP00813 363 aa12.89□□□□□ -0.35
USP39-206ENST00000448971 IGHV3-9P01782 118 aa12.89□□□□□ -0.35
USP39-206ENST00000448971 CD53P19397 219 aa12.89□□□□□ -0.35
USP39-206ENST00000448971 PSMB1P20618 241 aaKnown RBP12.89□□□□□ -0.35
USP39-206ENST00000448971 CBLP22681 906 aa12.89□□□□□ -0.35
USP39-206ENST00000448971 KDELR2P33947 212 aa12.89□□□□□ -0.35
USP39-206ENST00000448971 GSK3BP49841 420 aa12.89□□□□□ -0.35
USP39-206ENST00000448971 H3F3AP84243 136 aa12.89□□□□□ -0.35
USP39-206ENST00000448971 IL1RL1Q01638 556 aa12.89□□□□□ -0.35
USP39-206ENST00000448971 CYBRD1Q53TN4 286 aa12.89□□□□□ -0.35
USP39-206ENST00000448971 TMEM225Q6GV28 225 aa12.89□□□□□ -0.35
USP39-206ENST00000448971 C8orf82Q6P1X6 216 aaPredicted RBP12.89□□□□□ -0.35
USP39-206ENST00000448971 GABRG1Q8N1C3 465 aa12.89□□□□□ -0.35
USP39-206ENST00000448971 C10orf53Q8N6V4 93 aa12.89□□□□□ -0.35
USP39-206ENST00000448971 LZICQ8WZA0 190 aa12.89□□□□□ -0.35
USP39-206ENST00000448971 KISS1RQ969F8 398 aaPredicted RBP12.89□□□□□ -0.35
USP39-206ENST00000448971 FAM162AQ96A26 154 aa12.89□□□□□ -0.35
USP39-206ENST00000448971 WFIKKN1Q96NZ8 548 aa12.89□□□□□ -0.35
USP39-206ENST00000448971 CCT8L2Q96SF2 557 aa12.89□□□□□ -0.35
USP39-206ENST00000448971 ADA2Q9NZK5 511 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms