RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 VLDLRP98155 873 aa12.24□□□□□ -0.45
PDLIM2-213ENST00000448520 EPS8Q12929 822 aa12.24□□□□□ -0.45
PDLIM2-213ENST00000448520 EXOC3L2Q2M3D2 409 aa12.24□□□□□ -0.45
PDLIM2-213ENST00000448520 STAC2Q6ZMT1 411 aa12.24□□□□□ -0.45
PDLIM2-213ENST00000448520 DEF8Q6ZN54 512 aa12.24□□□□□ -0.45
PDLIM2-213ENST00000448520 C22orf34Q6ZV56 151 aa12.24□□□□□ -0.45
PDLIM2-213ENST00000448520 ESPNLQ6ZVH7 1005 aa12.24□□□□□ -0.45
PDLIM2-213ENST00000448520 RAI1Q7Z5J4 1906 aaPredicted RBP12.24□□□□□ -0.45
PDLIM2-213ENST00000448520 AQP12AQ8IXF9 295 aa12.24□□□□□ -0.45
PDLIM2-213ENST00000448520 OR52E4Q8NGH9 312 aa12.24□□□□□ -0.45
PDLIM2-213ENST00000448520 OR10D3Q8NH80 312 aa12.24□□□□□ -0.45
PDLIM2-213ENST00000448520 TMEM171Q8WVE6 324 aa12.24□□□□□ -0.45
PDLIM2-213ENST00000448520 OIT3Q8WWZ8 545 aa12.24□□□□□ -0.45
PDLIM2-213ENST00000448520 LZICQ8WZA0 190 aa12.24□□□□□ -0.45
PDLIM2-213ENST00000448520 RSRC1Q96IZ7 334 aaKnown RBP12.24□□□□□ -0.45
PDLIM2-213ENST00000448520 HDHD5Q9BXW7 423 aa12.24□□□□□ -0.45
PDLIM2-213ENST00000448520 AMBRA1Q9C0C7 1298 aa12.24□□□□□ -0.45
PDLIM2-213ENST00000448520 CXorf56Q9H5V9 222 aa12.24□□□□□ -0.45
PDLIM2-213ENST00000448520 AURKCQ9UQB9 309 aa12.24□□□□□ -0.45
PDLIM2-213ENST00000448520 VDAC3Q9Y277 283 aa12.24□□□□□ -0.45
PDLIM2-213ENST00000448520 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.23□□□□□ -0.45
PDLIM2-213ENST00000448520 DHRS12A0PJE2 317 aa12.23□□□□□ -0.45
PDLIM2-213ENST00000448520 SMAD7O15105 426 aaKnown RBP12.23□□□□□ -0.45
PDLIM2-213ENST00000448520 EIF4E2O60573 245 aaKnown RBP12.23□□□□□ -0.45
PDLIM2-213ENST00000448520 CNOT4O95628 575 aaKnown RBP12.23□□□□□ -0.45
PDLIM2-213ENST00000448520 NUDT14O95848 222 aa12.23□□□□□ -0.45
PDLIM2-213ENST00000448520 THBDP07204 575 aa12.23□□□□□ -0.45
PDLIM2-213ENST00000448520 SLC6A8P48029 635 aa12.23□□□□□ -0.45
PDLIM2-213ENST00000448520 PTH2RP49190 550 aa12.23□□□□□ -0.45
PDLIM2-213ENST00000448520 P2RX1P51575 399 aa12.23□□□□□ -0.45
PDLIM2-213ENST00000448520 PPP2R2BQ00005 443 aa12.23□□□□□ -0.45
PDLIM2-213ENST00000448520 MTX3Q5HYI7 312 aa12.23□□□□□ -0.45
PDLIM2-213ENST00000448520 PPP4R4Q6NUP7 873 aa12.23□□□□□ -0.45
PDLIM2-213ENST00000448520 CADM2Q8N3J6 435 aa12.23□□□□□ -0.45
PDLIM2-213ENST00000448520 OR5W2Q8NH69 310 aa12.23□□□□□ -0.45
PDLIM2-213ENST00000448520 OR2V1Q8NHB1 315 aa12.23□□□□□ -0.45
PDLIM2-213ENST00000448520 RASSF5Q8WWW0 418 aa12.23□□□□□ -0.45
PDLIM2-213ENST00000448520 GEMIN6Q8WXD5 167 aaKnown RBP12.23□□□□□ -0.45
PDLIM2-213ENST00000448520 ADGRG7Q96K78 797 aa12.23□□□□□ -0.45
PDLIM2-213ENST00000448520 MCHR1Q99705 422 aa12.23□□□□□ -0.45
PDLIM2-213ENST00000448520 EXOSC3Q9NQT5 275 aaKnown RBP12.23□□□□□ -0.45
PDLIM2-213ENST00000448520 ZNF701Q9NV72 531 aaPredicted RBP12.23□□□□□ -0.45
PDLIM2-213ENST00000448520 FREM1Q5H8C1 2179 aa12.23□□□□□ -0.45
PDLIM2-213ENST00000448520 CPSF4LA6NMK7 179 aaKnown RBP12.22□□□□□ -0.45
PDLIM2-213ENST00000448520 LINGO3P0C6S8 592 aa12.22□□□□□ -0.45
PDLIM2-213ENST00000448520 PSMB1P20618 241 aaKnown RBP12.22□□□□□ -0.45
PDLIM2-213ENST00000448520 PTNP21246 168 aa12.22□□□□□ -0.45
PDLIM2-213ENST00000448520 EIF1P41567 113 aaKnown RBP12.22□□□□□ -0.45
PDLIM2-213ENST00000448520 IDH2P48735 452 aaKnown RBP12.22□□□□□ -0.45
PDLIM2-213ENST00000448520 ZNF41P51814 821 aaPredicted RBP12.22□□□□□ -0.45
PDLIM2-213ENST00000448520 CARD18P57730 90 aa12.22□□□□□ -0.45
PDLIM2-213ENST00000448520 QPRTQ15274 297 aa12.22□□□□□ -0.45
PDLIM2-213ENST00000448520 CTU2Q2VPK5 515 aaKnown RBP12.22□□□□□ -0.45
PDLIM2-213ENST00000448520 IQCCQ4KMZ1 466 aa12.22□□□□□ -0.45
PDLIM2-213ENST00000448520 ZNF704Q6ZNC4 412 aaPredicted RBP12.22□□□□□ -0.45
PDLIM2-213ENST00000448520 ZNF611Q8N823 705 aa12.22□□□□□ -0.45
PDLIM2-213ENST00000448520 GPR119Q8TDV5 335 aa12.22□□□□□ -0.45
PDLIM2-213ENST00000448520 IGFBPL1Q8WX77 278 aa12.22□□□□□ -0.45
PDLIM2-213ENST00000448520 PYDC1Q8WXC3 89 aa12.22□□□□□ -0.45
PDLIM2-213ENST00000448520 OSTF1Q92882 214 aa12.22□□□□□ -0.45
PDLIM2-213ENST00000448520 C7orf34Q96L11 122 aa12.22□□□□□ -0.45
PDLIM2-213ENST00000448520 USB1Q9BQ65 265 aaKnown RBP12.22□□□□□ -0.45
PDLIM2-213ENST00000448520 ARMC7Q9H6L4 198 aa12.22□□□□□ -0.45
PDLIM2-213ENST00000448520 TIGARQ9NQ88 270 aa12.22□□□□□ -0.45
PDLIM2-213ENST00000448520 MED17Q9NVC6 651 aa12.22□□□□□ -0.45
PDLIM2-213ENST00000448520 RHCGQ9UBD6 479 aa12.22□□□□□ -0.45
PDLIM2-213ENST00000448520 CLEC4AQ9UMR7 237 aa12.22□□□□□ -0.45
PDLIM2-213ENST00000448520 SLC9A8Q9Y2E8 581 aa12.22□□□□□ -0.45
PDLIM2-213ENST00000448520 CADP27708 2225 aa12.21□□□□□ -0.45
PDLIM2-213ENST00000448520 TRIM64A6NGJ6 449 aa12.21□□□□□ -0.45
PDLIM2-213ENST00000448520 TRIM64BA6NI03 449 aa12.21□□□□□ -0.45
PDLIM2-213ENST00000448520 TNFSF11O14788 317 aa12.21□□□□□ -0.45
PDLIM2-213ENST00000448520 HS3ST1O14792 307 aa12.21□□□□□ -0.45
PDLIM2-213ENST00000448520 FFAR1O14842 300 aa12.21□□□□□ -0.45
PDLIM2-213ENST00000448520 CXCL13O43927 109 aa12.21□□□□□ -0.45
PDLIM2-213ENST00000448520 FKBP6O75344 327 aa12.21□□□□□ -0.45
PDLIM2-213ENST00000448520 THY1P04216 161 aa12.21□□□□□ -0.45
PDLIM2-213ENST00000448520 IFNW1P05000 195 aa12.21□□□□□ -0.45
PDLIM2-213ENST00000448520 PSMA4P25789 261 aaKnown RBP12.21□□□□□ -0.45
PDLIM2-213ENST00000448520 ADH6P28332 368 aa12.21□□□□□ -0.45
PDLIM2-213ENST00000448520 SESN3P58005 492 aa12.21□□□□□ -0.45
PDLIM2-213ENST00000448520 CHRNB3Q05901 458 aa12.21□□□□□ -0.45
PDLIM2-213ENST00000448520 FOXF1Q12946 379 aa12.21□□□□□ -0.45
PDLIM2-213ENST00000448520 PIN1Q13526 163 aaPredicted RBP12.21□□□□□ -0.45
PDLIM2-213ENST00000448520 PLPPR5Q32ZL2 321 aa12.21□□□□□ -0.45
PDLIM2-213ENST00000448520 FAM98BQ52LJ0 330 aaKnown RBP12.21□□□□□ -0.45
PDLIM2-213ENST00000448520 ENTPD8Q5MY95 495 aa12.21□□□□□ -0.45
PDLIM2-213ENST00000448520 HBMQ6B0K9 141 aa12.21□□□□□ -0.45
PDLIM2-213ENST00000448520 ZDHHC21Q8IVQ6 265 aa12.21□□□□□ -0.45
PDLIM2-213ENST00000448520 ZNF440Q8IYI8 595 aa12.21□□□□□ -0.45
PDLIM2-213ENST00000448520 TOR1AIP2Q8NFQ8 470 aa12.21□□□□□ -0.45
PDLIM2-213ENST00000448520 STEAP2Q8NFT2 490 aa12.21□□□□□ -0.45
PDLIM2-213ENST00000448520 ZNF563Q8TA94 476 aa12.21□□□□□ -0.45
PDLIM2-213ENST00000448520 POC1BQ8TC44 478 aa12.21□□□□□ -0.45
PDLIM2-213ENST00000448520 PLPPR2Q96GM1 343 aa12.21□□□□□ -0.45
PDLIM2-213ENST00000448520 TMEM204Q9BSN7 226 aa12.21□□□□□ -0.45
PDLIM2-213ENST00000448520 CHID1Q9BWS9 393 aa12.21□□□□□ -0.45
PDLIM2-213ENST00000448520 ACTR6Q9GZN1 396 aa12.21□□□□□ -0.45
PDLIM2-213ENST00000448520 NGBQ9NPG2 151 aa12.21□□□□□ -0.45
PDLIM2-213ENST00000448520 NDUFAF4Q9P032 175 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms