RNA–Protein interactions for RNA: ENST00000447540.5

CHD9-203, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 5 BASIC

Gene CHD9, Length 11,509 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-203ENST00000447540 LRRC70Q7Z2Q7 622 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 LDLRAD3Q86YD5 345 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 ARHGAP12Q8IWW6 846 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 GTF3C2Q8WUA4 911 aaPredicted RBP2.72□□□□□ -1.97
CHD9-203ENST00000447540 THAP4Q8WY91 577 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 ZBED6CLQ96FA7 236 aaPredicted RBP2.72□□□□□ -1.97
CHD9-203ENST00000447540 TMEM74Q96NL1 305 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 JAM3Q9BX67 310 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 EIF5A2Q9GZV4 153 aaKnown RBP2.72□□□□□ -1.97
CHD9-203ENST00000447540 NEUROD4Q9HD90 331 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 POT1Q9NUX5 634 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 PLEK2Q9NYT0 353 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 ATG2BQ96BY7 2078 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 F6UZH7 168 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 NRP1O14786 923 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 GRAP2O75791 330 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 CLDN9O95484 217 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 SEMG1P04279 462 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 SNHG28P0DPA3 235 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 COX5BP10606 129 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 CCND3P30281 292 aaPredicted RBP2.72□□□□□ -1.97
CHD9-203ENST00000447540 UBE2KP61086 200 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 GPR157Q5UAW9 335 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 BHLHA15Q7RTS1 189 aaPredicted RBP2.72□□□□□ -1.97
CHD9-203ENST00000447540 PNLDC1Q8NA58 520 aaKnown RBP2.72□□□□□ -1.97
CHD9-203ENST00000447540 OR1S1Q8NH92 325 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 CPT1CQ8TCG5 803 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 PIGBQ92521 554 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 DTD2Q96FN9 168 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 PACRGQ96M98 296 aaPredicted RBP2.72□□□□□ -1.97
CHD9-203ENST00000447540 MMP19Q99542 508 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 UTP23Q9BRU9 249 aaKnown RBP2.72□□□□□ -1.97
CHD9-203ENST00000447540 TIMM29Q9BSF4 260 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 CIPCQ9C0C6 399 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 PCBD2Q9H0N5 130 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 ZBP1Q9H171 429 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 ZNF430Q9H8G1 570 aaPredicted RBP2.72□□□□□ -1.97
CHD9-203ENST00000447540 RCC2Q9P258 522 aaKnown RBP2.72□□□□□ -1.97
CHD9-203ENST00000447540 ENTPD2Q9Y5L3 495 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 ARL5AQ9Y689 179 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 SCN7AQ01118 1682 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 A0A1B0GV90 55 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 RIIAD1A6NNX1 92 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 PDHXO00330 501 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 CBR3O75828 277 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 DIRAS3O95661 229 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 PTHP01270 115 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 FOLR1P15328 257 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 CBLP22681 906 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 GDNFP39905 211 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 LUMP51884 338 aaPredicted RBP2.72□□□□□ -1.97
CHD9-203ENST00000447540 TCL1AP56279 114 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 MTPNP58546 118 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 TLE3Q04726 772 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 MTM1Q13496 603 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 ALG10BQ5I7T1 473 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 ZNF660Q6AZW8 331 aaPredicted RBP2.72□□□□□ -1.97
CHD9-203ENST00000447540 ENPP6Q6UWR7 440 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 RBMS3Q6XE24 437 aaKnown RBP2.72□□□□□ -1.97
CHD9-203ENST00000447540 NRMQ8IXM6 262 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 OR9K2Q8NGE7 335 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 TMEM169Q96HH4 297 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 C14orf144Q96I85 54 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 GAL3ST4Q96RP7 486 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 OSMRQ99650 979 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 CCDC3Q9BQI4 270 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 CABLES2Q9BTV7 478 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 NDRG2Q9UN36 371 aaKnown RBP2.72□□□□□ -1.97
CHD9-203ENST00000447540 FLVCR1Q9Y5Y0 555 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 TBC1D3DA0A087WVF3 549 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 TBC1D3IA0A087WXS9 549 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 TBC1D3EA0A087X179 549 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 TRAV39A0A0B4J263 110 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 TBC1D3BA6NDS4 549 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 TBC1D3LB9A6J9 549 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 SLC16A8O95907 504 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 NUDT3O95989 172 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 CST4P01036 141 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 BPIP17213 487 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 NDUFA6P56556 154 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 ERVS71-1P61550 626 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 GRM7Q14831 915 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 HNRNPA1L2Q32P51 320 aaKnown RBP2.72□□□□□ -1.97
CHD9-203ENST00000447540 TBC1D3GQ6DHY5 549 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 TBC1D3CQ6IPX1 549 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 C11orf87Q6NUJ2 197 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 LANCL3Q6ZV70 420 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 SIAH3Q8IW03 269 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 TBC1D3Q8IZP1 549 aaPredicted RBP2.72□□□□□ -1.97
CHD9-203ENST00000447540 FAM58AQ8N1B3 248 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 ZDHHC22Q8N966 263 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 ZNF383Q8NA42 475 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 KREMEN2Q8NCW0 462 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 OR4K14Q8NGD5 310 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 IL31RAQ8NI17 732 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 RAB8BQ92930 207 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 FBXO4Q9UKT5 387 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 RIMBP3CA6NJZ7 1639 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 RIMBP3BA6NNM3 1639 aa2.72□□□□□ -1.97
CHD9-203ENST00000447540 DOCK7Q96N67 2140 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms