RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 KISS1RQ969F8 398 aaPredicted RBP13.11□□□□□ -0.31
HDAC4-204ENST00000446876 PIK3IP1Q96FE7 263 aa13.11□□□□□ -0.31
HDAC4-204ENST00000446876 TPD52L3Q96J77 140 aa13.11□□□□□ -0.31
HDAC4-204ENST00000446876 CCT8L2Q96SF2 557 aa13.11□□□□□ -0.31
HDAC4-204ENST00000446876 ZNF587Q96SQ5 575 aaPredicted RBP13.11□□□□□ -0.31
HDAC4-204ENST00000446876 ALG2Q9H553 416 aa13.11□□□□□ -0.31
HDAC4-204ENST00000446876 FANCFQ9NPI8 374 aa13.11□□□□□ -0.31
HDAC4-204ENST00000446876 FAM53CQ9NYF3 392 aa13.11□□□□□ -0.31
HDAC4-204ENST00000446876 ZNF226Q9NYT6 803 aa13.11□□□□□ -0.31
HDAC4-204ENST00000446876 BAG5Q9UL15 447 aa13.11□□□□□ -0.31
HDAC4-204ENST00000446876 SLC7A7Q9UM01 511 aa13.11□□□□□ -0.31
HDAC4-204ENST00000446876 SLC9A8Q9Y2E8 581 aa13.11□□□□□ -0.31
HDAC4-204ENST00000446876 SPG11Q96JI7 2443 aa13.1□□□□□ -0.31
HDAC4-204ENST00000446876 CXCR6O00574 342 aa13.1□□□□□ -0.31
HDAC4-204ENST00000446876 CHP2O43745 196 aa13.1□□□□□ -0.31
HDAC4-204ENST00000446876 BGLAPP02818 100 aa13.1□□□□□ -0.31
HDAC4-204ENST00000446876 NCK1P16333 377 aa13.1□□□□□ -0.31
HDAC4-204ENST00000446876 LTBQ06643 244 aa13.1□□□□□ -0.31
HDAC4-204ENST00000446876 FOXD4Q12950 439 aaPredicted RBP13.1□□□□□ -0.31
HDAC4-204ENST00000446876 ITGADQ13349 1161 aa13.1□□□□□ -0.31
HDAC4-204ENST00000446876 FAM69AQ5T7M9 428 aa13.1□□□□□ -0.31
HDAC4-204ENST00000446876 FBXW9Q5XUX1 488 aa13.1□□□□□ -0.31
HDAC4-204ENST00000446876 TMEM225Q6GV28 225 aa13.1□□□□□ -0.31
HDAC4-204ENST00000446876 BHLHA15Q7RTS1 189 aaPredicted RBP13.1□□□□□ -0.31
HDAC4-204ENST00000446876 RNF148Q8N7C7 305 aa13.1□□□□□ -0.31
HDAC4-204ENST00000446876 MOGAT1Q96PD6 335 aa13.1□□□□□ -0.31
HDAC4-204ENST00000446876 LRRC37BQ96QE4 947 aa13.1□□□□□ -0.31
HDAC4-204ENST00000446876 HS3ST6Q96QI5 342 aa13.1□□□□□ -0.31
HDAC4-204ENST00000446876 SF3B5Q9BWJ5 86 aaKnown RBP13.1□□□□□ -0.31
HDAC4-204ENST00000446876 PCDHAC1Q9H158 963 aa13.1□□□□□ -0.31
HDAC4-204ENST00000446876 ABCD2Q9UBJ2 740 aa13.1□□□□□ -0.31
HDAC4-204ENST00000446876 ITGB1BP2Q9UKP3 347 aa13.1□□□□□ -0.31
HDAC4-204ENST00000446876 AP3M1Q9Y2T2 418 aa13.1□□□□□ -0.31
HDAC4-204ENST00000446876 TRAPPC13A5PLN9 417 aa13.09□□□□□ -0.31
HDAC4-204ENST00000446876 KPNA4O00629 521 aaPredicted RBP13.09□□□□□ -0.31
HDAC4-204ENST00000446876 GSTA4O15217 222 aa13.09□□□□□ -0.31
HDAC4-204ENST00000446876 FZD7O75084 574 aa13.09□□□□□ -0.31
HDAC4-204ENST00000446876 DCTN3O75935 186 aa13.09□□□□□ -0.31
HDAC4-204ENST00000446876 IFNA14P01570 189 aa13.09□□□□□ -0.31
HDAC4-204ENST00000446876 PPP3CBP16298 524 aa13.09□□□□□ -0.31
HDAC4-204ENST00000446876 COX5AP20674 150 aa13.09□□□□□ -0.31
HDAC4-204ENST00000446876 LOXP28300 417 aaPredicted RBP13.09□□□□□ -0.31
HDAC4-204ENST00000446876 LGALS3BPQ08380 585 aa13.09□□□□□ -0.31
HDAC4-204ENST00000446876 FAPQ12884 760 aa13.09□□□□□ -0.31
HDAC4-204ENST00000446876 P2RY6Q15077 328 aa13.09□□□□□ -0.31
HDAC4-204ENST00000446876 TAB1Q15750 504 aa13.09□□□□□ -0.31
HDAC4-204ENST00000446876 SWT1Q5T5J6 900 aaKnown RBP13.09□□□□□ -0.31
HDAC4-204ENST00000446876 TSPO2Q5TGU0 170 aa13.09□□□□□ -0.31
HDAC4-204ENST00000446876 C9orf135Q5VTT2 229 aa13.09□□□□□ -0.31
HDAC4-204ENST00000446876 C5orf46Q6UWT4 87 aa13.09□□□□□ -0.31
HDAC4-204ENST00000446876 LINC00114Q6XXX2 140 aa13.09□□□□□ -0.31
HDAC4-204ENST00000446876 CREB3L2Q70SY1 520 aa13.09□□□□□ -0.31
HDAC4-204ENST00000446876 AAED1Q7RTV5 226 aa13.09□□□□□ -0.31
HDAC4-204ENST00000446876 VTCN1Q7Z7D3 282 aa13.09□□□□□ -0.31
HDAC4-204ENST00000446876 EPHX4Q8IUS5 362 aa13.09□□□□□ -0.31
HDAC4-204ENST00000446876 C10orf53Q8N6V4 93 aa13.09□□□□□ -0.31
HDAC4-204ENST00000446876 STEAP2Q8NFT2 490 aa13.09□□□□□ -0.31
HDAC4-204ENST00000446876 TMEM45BQ96B21 275 aa13.09□□□□□ -0.31
HDAC4-204ENST00000446876 SLC41A3Q96GZ6 507 aa13.09□□□□□ -0.31
HDAC4-204ENST00000446876 KCTD14Q9BQ13 255 aaPredicted RBP13.09□□□□□ -0.31
HDAC4-204ENST00000446876 PRSS27Q9BQR3 290 aa13.09□□□□□ -0.31
HDAC4-204ENST00000446876 TMEM43Q9BTV4 400 aa13.09□□□□□ -0.31
HDAC4-204ENST00000446876 SLC7A10Q9NS82 523 aa13.09□□□□□ -0.31
HDAC4-204ENST00000446876 ADA2Q9NZK5 511 aa13.09□□□□□ -0.31
HDAC4-204ENST00000446876 B3GAT1Q9P2W7 334 aa13.09□□□□□ -0.31
HDAC4-204ENST00000446876 TAGLN3Q9UI15 199 aa13.09□□□□□ -0.31
HDAC4-204ENST00000446876 RASD1Q9Y272 281 aa13.09□□□□□ -0.31
HDAC4-204ENST00000446876 CREBBPQ92793 2442 aa13.09□□□□□ -0.31
HDAC4-204ENST00000446876 AKAP9Q99996 3911 aa13.08□□□□□ -0.32
HDAC4-204ENST00000446876 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.08□□□□□ -0.32
HDAC4-204ENST00000446876 KLF4O43474 513 aa13.08□□□□□ -0.32
HDAC4-204ENST00000446876 OR2T1O43869 369 aa13.08□□□□□ -0.32
HDAC4-204ENST00000446876 RAD51DO75771 328 aa13.08□□□□□ -0.32
HDAC4-204ENST00000446876 ZNF682O95780 498 aa13.08□□□□□ -0.32
HDAC4-204ENST00000446876 HPRP00739 348 aa13.08□□□□□ -0.32
HDAC4-204ENST00000446876 DNAJA1P31689 397 aaKnown RBP13.08□□□□□ -0.32
HDAC4-204ENST00000446876 SELENOPP49908 381 aa13.08□□□□□ -0.32
HDAC4-204ENST00000446876 TAS2R41P59536 307 aa13.08□□□□□ -0.32
HDAC4-204ENST00000446876 SLC25A3Q00325 362 aa13.08□□□□□ -0.32
HDAC4-204ENST00000446876 IL1RL1Q01638 556 aa13.08□□□□□ -0.32
HDAC4-204ENST00000446876 PIN1Q13526 163 aaPredicted RBP13.08□□□□□ -0.32
HDAC4-204ENST00000446876 STK11Q15831 433 aa13.08□□□□□ -0.32
HDAC4-204ENST00000446876 ZNF433Q8N7K0 673 aaPredicted RBP13.08□□□□□ -0.32
HDAC4-204ENST00000446876 FAM156AQ8NDB6 213 aa13.08□□□□□ -0.32
HDAC4-204ENST00000446876 RBM15BQ8NDT2 890 aaKnown RBP13.08□□□□□ -0.32
HDAC4-204ENST00000446876 EPYCQ99645 322 aa13.08□□□□□ -0.32
HDAC4-204ENST00000446876 HDHD5Q9BXW7 423 aa13.08□□□□□ -0.32
HDAC4-204ENST00000446876 OR10A4Q9H209 315 aa13.08□□□□□ -0.32
HDAC4-204ENST00000446876 PLEKHF2Q9H8W4 249 aa13.08□□□□□ -0.32
HDAC4-204ENST00000446876 SPAG4Q9NPE6 437 aa13.08□□□□□ -0.32
HDAC4-204ENST00000446876 MALT1Q9UDY8 824 aa13.08□□□□□ -0.32
HDAC4-204ENST00000446876 EGFL7Q9UHF1 273 aa13.08□□□□□ -0.32
HDAC4-204ENST00000446876 PLEKHA6Q9Y2H5 1048 aa13.08□□□□□ -0.32
HDAC4-204ENST00000446876 VAMP5O95183 116 aa13.07□□□□□ -0.32
HDAC4-204ENST00000446876 GOSR1O95249 250 aa13.07□□□□□ -0.32
HDAC4-204ENST00000446876 CNOT4O95628 575 aaKnown RBP13.07□□□□□ -0.32
HDAC4-204ENST00000446876 FAM107AO95990 144 aa13.07□□□□□ -0.32
HDAC4-204ENST00000446876 SERPINA1P01009 418 aa13.07□□□□□ -0.32
HDAC4-204ENST00000446876 ITGA5P08648 1049 aa13.07□□□□□ -0.32
HDAC4-204ENST00000446876 NQO1P15559 274 aaKnown RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms