RNA–Protein interactions for RNA: ENST00000445704.1

HDAC4-203, Transcript of histone deacetylase 4, humanhuman

TSL 3

Gene HDAC4, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-203ENST00000445704 SLC26A7Q8TE54 656 aa16.56■□□□□ 0.24
HDAC4-203ENST00000445704 MYLK2Q9H1R3 596 aa16.56■□□□□ 0.24
HDAC4-203ENST00000445704 SLC7A10Q9NS82 523 aa16.56■□□□□ 0.24
HDAC4-203ENST00000445704 CMTM6Q9NX76 183 aa16.56■□□□□ 0.24
HDAC4-203ENST00000445704 RAI1Q7Z5J4 1906 aaPredicted RBP16.55■□□□□ 0.24
HDAC4-203ENST00000445704 TRAV36DV7A0A075B6V5 113 aa16.55■□□□□ 0.24
HDAC4-203ENST00000445704 PDLIM1O00151 329 aa16.55■□□□□ 0.24
HDAC4-203ENST00000445704 AIM2O14862 343 aa16.55■□□□□ 0.24
HDAC4-203ENST00000445704 SNX3O60493 162 aa16.55■□□□□ 0.24
HDAC4-203ENST00000445704 RAD51DO75771 328 aa16.55■□□□□ 0.24
HDAC4-203ENST00000445704 LYPD3O95274 346 aa16.55■□□□□ 0.24
HDAC4-203ENST00000445704 THY1P04216 161 aa16.55■□□□□ 0.24
HDAC4-203ENST00000445704 ITGA5P08648 1049 aa16.55■□□□□ 0.24
HDAC4-203ENST00000445704 CBLP22681 906 aa16.55■□□□□ 0.24
HDAC4-203ENST00000445704 LTBQ06643 244 aa16.55■□□□□ 0.24
HDAC4-203ENST00000445704 VEZF1Q14119 521 aa16.55■□□□□ 0.24
HDAC4-203ENST00000445704 KEAP1Q14145 624 aa16.55■□□□□ 0.24
HDAC4-203ENST00000445704 STK11Q15831 433 aa16.55■□□□□ 0.24
HDAC4-203ENST00000445704 ENTPD8Q5MY95 495 aa16.55■□□□□ 0.24
HDAC4-203ENST00000445704 SWT1Q5T5J6 900 aaKnown RBP16.55■□□□□ 0.24
HDAC4-203ENST00000445704 ERICH5Q6P6B1 374 aa16.55■□□□□ 0.24
HDAC4-203ENST00000445704 C5orf46Q6UWT4 87 aa16.55■□□□□ 0.24
HDAC4-203ENST00000445704 WDR88Q6ZMY6 472 aa16.55■□□□□ 0.24
HDAC4-203ENST00000445704 CREB3L2Q70SY1 520 aa16.55■□□□□ 0.24
HDAC4-203ENST00000445704 AAED1Q7RTV5 226 aa16.55■□□□□ 0.24
HDAC4-203ENST00000445704 EPHX4Q8IUS5 362 aa16.55■□□□□ 0.24
HDAC4-203ENST00000445704 HSD17B8Q92506 261 aa16.55■□□□□ 0.24
HDAC4-203ENST00000445704 MBD6Q96DN6 1003 aa16.55■□□□□ 0.24
HDAC4-203ENST00000445704 FOXC2Q99958 501 aa16.55■□□□□ 0.24
HDAC4-203ENST00000445704 CXXC4Q9H2H0 198 aa16.55■□□□□ 0.24
HDAC4-203ENST00000445704 PARPBPQ9NWS1 579 aa16.55■□□□□ 0.24
HDAC4-203ENST00000445704 ASB6Q9NWX5 421 aa16.55■□□□□ 0.24
HDAC4-203ENST00000445704 SELENONQ9NZV5 590 aa16.55■□□□□ 0.24
HDAC4-203ENST00000445704 RASD1Q9Y272 281 aa16.55■□□□□ 0.24
HDAC4-203ENST00000445704 M0R082 166 aa16.54■□□□□ 0.24
HDAC4-203ENST00000445704 OR2T1O43869 369 aa16.54■□□□□ 0.24
HDAC4-203ENST00000445704 VAMP5O95183 116 aa16.54■□□□□ 0.24
HDAC4-203ENST00000445704 GGT1P19440 569 aa16.54■□□□□ 0.24
HDAC4-203ENST00000445704 TNFRSF1BP20333 461 aa16.54■□□□□ 0.24
HDAC4-203ENST00000445704 GTF2E2P29084 291 aaKnown RBP16.54■□□□□ 0.24
HDAC4-203ENST00000445704 GRPRP30550 384 aa16.54■□□□□ 0.24
HDAC4-203ENST00000445704 C9orf135Q5VTT2 229 aa16.54■□□□□ 0.24
HDAC4-203ENST00000445704 C8orf82Q6P1X6 216 aaPredicted RBP16.54■□□□□ 0.24
HDAC4-203ENST00000445704 ZNF613Q6PF04 617 aa16.54■□□□□ 0.24
HDAC4-203ENST00000445704 LINC00114Q6XXX2 140 aa16.54■□□□□ 0.24
HDAC4-203ENST00000445704 SPNS3Q6ZMD2 512 aa16.54■□□□□ 0.24
HDAC4-203ENST00000445704 ZNF704Q6ZNC4 412 aaPredicted RBP16.54■□□□□ 0.24
HDAC4-203ENST00000445704 SLC15A3Q8IY34 581 aa16.54■□□□□ 0.24
HDAC4-203ENST00000445704 OR2T12Q8NG77 320 aa16.54■□□□□ 0.24
HDAC4-203ENST00000445704 ZNF417Q8TAU3 575 aa16.54■□□□□ 0.24
HDAC4-203ENST00000445704 ZNF587Q96SQ5 575 aaPredicted RBP16.54■□□□□ 0.24
HDAC4-203ENST00000445704 USB1Q9BQ65 265 aaKnown RBP16.54■□□□□ 0.24
HDAC4-203ENST00000445704 TMEM204Q9BSN7 226 aa16.54■□□□□ 0.24
HDAC4-203ENST00000445704 UBTD1Q9HAC8 227 aa16.54■□□□□ 0.24
HDAC4-203ENST00000445704 B3GAT1Q9P2W7 334 aa16.54■□□□□ 0.24
HDAC4-203ENST00000445704 GMNCA6NCL1 334 aa16.53■□□□□ 0.24
HDAC4-203ENST00000445704 OR5H1A6NKK0 313 aa16.53■□□□□ 0.24
HDAC4-203ENST00000445704 LRRN3E7EW58 273 aa16.53■□□□□ 0.24
HDAC4-203ENST00000445704 CHP2O43745 196 aa16.53■□□□□ 0.24
HDAC4-203ENST00000445704 BGLAPP02818 100 aa16.53■□□□□ 0.24
HDAC4-203ENST00000445704 SELENOPP49908 381 aa16.53■□□□□ 0.24
HDAC4-203ENST00000445704 NR1H2P55055 460 aa16.53■□□□□ 0.24
HDAC4-203ENST00000445704 GNGT1P63211 74 aa16.53■□□□□ 0.24
HDAC4-203ENST00000445704 LGALS3BPQ08380 585 aa16.53■□□□□ 0.24
HDAC4-203ENST00000445704 PPA1Q15181 289 aa16.53■□□□□ 0.24
HDAC4-203ENST00000445704 DEFB113Q30KQ7 82 aa16.53■□□□□ 0.24
HDAC4-203ENST00000445704 TIMM23BQ5SRD1 257 aa16.53■□□□□ 0.24
HDAC4-203ENST00000445704 NCMAPQ5T1S8 102 aa16.53■□□□□ 0.24
HDAC4-203ENST00000445704 MICU2Q8IYU8 434 aa16.53■□□□□ 0.24
HDAC4-203ENST00000445704 ADAMTS16Q8TE57 1224 aa16.53■□□□□ 0.24
HDAC4-203ENST00000445704 RASSF5Q8WWW0 418 aa16.53■□□□□ 0.24
HDAC4-203ENST00000445704 MOGAT1Q96PD6 335 aa16.53■□□□□ 0.24
HDAC4-203ENST00000445704 TMEM43Q9BTV4 400 aa16.53■□□□□ 0.24
HDAC4-203ENST00000445704 NSRP1Q9H0G5 558 aaKnown RBP16.53■□□□□ 0.24
HDAC4-203ENST00000445704 PCDHAC1Q9H158 963 aa16.53■□□□□ 0.24
HDAC4-203ENST00000445704 SLCO5A1Q9H2Y9 848 aa16.53■□□□□ 0.24
HDAC4-203ENST00000445704 TAS2R16Q9NYV7 291 aa16.53■□□□□ 0.24
HDAC4-203ENST00000445704 NPAP1Q9NZP6 1156 aa16.53■□□□□ 0.24
HDAC4-203ENST00000445704 UPB1Q9UBR1 384 aa16.53■□□□□ 0.24
HDAC4-203ENST00000445704 EDARQ9UNE0 448 aa16.53■□□□□ 0.24
HDAC4-203ENST00000445704 SH3GLB1Q9Y371 365 aa16.53■□□□□ 0.24
HDAC4-203ENST00000445704 CIB4A0PJX0 185 aa16.52■□□□□ 0.24
HDAC4-203ENST00000445704 NME4O00746 187 aa16.52■□□□□ 0.24
HDAC4-203ENST00000445704 GABRA6Q16445 453 aa16.52■□□□□ 0.24
HDAC4-203ENST00000445704 ACKR1Q16570 336 aa16.52■□□□□ 0.24
HDAC4-203ENST00000445704 LRRC23Q53EV4 343 aaPredicted RBP16.52■□□□□ 0.24
HDAC4-203ENST00000445704 ARPINQ7Z6K5 226 aa16.52■□□□□ 0.24
HDAC4-203ENST00000445704 CARM1Q86X55 608 aa16.52■□□□□ 0.24
HDAC4-203ENST00000445704 OR6S1Q8NH40 331 aa16.52■□□□□ 0.24
HDAC4-203ENST00000445704 PROX1Q92786 737 aa16.52■□□□□ 0.24
HDAC4-203ENST00000445704 SLC41A3Q96GZ6 507 aa16.52■□□□□ 0.24
HDAC4-203ENST00000445704 ALPK1Q96QP1 1244 aa16.52■□□□□ 0.24
HDAC4-203ENST00000445704 SLC7A7Q9UM01 511 aa16.52■□□□□ 0.24
HDAC4-203ENST00000445704 A0A1W2PR80 420 aa16.51■□□□□ 0.23
HDAC4-203ENST00000445704 ELOVL7A1L3X0 281 aa16.51■□□□□ 0.23
HDAC4-203ENST00000445704 TRAPPC13A5PLN9 417 aa16.51■□□□□ 0.23
HDAC4-203ENST00000445704 DPRXA6NFQ7 191 aa16.51■□□□□ 0.23
HDAC4-203ENST00000445704 SHOX2O60902 331 aaPredicted RBP16.51■□□□□ 0.23
HDAC4-203ENST00000445704 HPRP00739 348 aa16.51■□□□□ 0.23
HDAC4-203ENST00000445704 KDELR2P33947 212 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms