RNA–Protein interactions for RNA: ENST00000445181.5

C9orf3-207, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 873 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-207ENST00000445181 EPXP11678 715 aa21.23■□□□□ 0.99
C9orf3-207ENST00000445181 CBLP22681 906 aa21.23■□□□□ 0.99
C9orf3-207ENST00000445181 SLC17A1Q14916 467 aa21.23■□□□□ 0.99
C9orf3-207ENST00000445181 TESK1Q15569 626 aa21.23■□□□□ 0.99
C9orf3-207ENST00000445181 GLYATQ6IB77 296 aa21.23■□□□□ 0.99
C9orf3-207ENST00000445181 TTC33Q6PID6 262 aaPredicted RBP21.23■□□□□ 0.99
C9orf3-207ENST00000445181 VTCN1Q7Z7D3 282 aa21.23■□□□□ 0.99
C9orf3-207ENST00000445181 FAM156AQ8NDB6 213 aa21.23■□□□□ 0.99
C9orf3-207ENST00000445181 APH1AQ96BI3 265 aa21.23■□□□□ 0.99
C9orf3-207ENST00000445181 MED18Q9BUE0 208 aa21.23■□□□□ 0.99
C9orf3-207ENST00000445181 SF3B5Q9BWJ5 86 aaKnown RBP21.23■□□□□ 0.99
C9orf3-207ENST00000445181 RASSF1Q9NS23 344 aa21.23■□□□□ 0.99
C9orf3-207ENST00000445181 A6NNC1 897 aa21.22■□□□□ 0.99
C9orf3-207ENST00000445181 CASKO14936 926 aa21.22■□□□□ 0.99
C9orf3-207ENST00000445181 VAMP5O95183 116 aa21.22■□□□□ 0.99
C9orf3-207ENST00000445181 THY1P04216 161 aa21.22■□□□□ 0.99
C9orf3-207ENST00000445181 IL1RL1Q01638 556 aa21.22■□□□□ 0.99
C9orf3-207ENST00000445181 FOXD4Q12950 439 aaPredicted RBP21.22■□□□□ 0.99
C9orf3-207ENST00000445181 DAZAP2Q15038 168 aaPredicted RBP21.22■□□□□ 0.99
C9orf3-207ENST00000445181 CASP12Q6UXS9 341 aa21.22■□□□□ 0.99
C9orf3-207ENST00000445181 CBLL1Q75N03 491 aa21.22■□□□□ 0.99
C9orf3-207ENST00000445181 TSPYL5Q86VY4 417 aaPredicted RBP21.22■□□□□ 0.99
C9orf3-207ENST00000445181 CXorf67Q86X51 503 aaPredicted RBP21.22■□□□□ 0.99
C9orf3-207ENST00000445181 UBE2J2Q8N2K1 259 aa21.22■□□□□ 0.99
C9orf3-207ENST00000445181 OR9K2Q8NGE7 335 aa21.22■□□□□ 0.99
C9orf3-207ENST00000445181 MPP4Q96JB8 637 aa21.22■□□□□ 0.99
C9orf3-207ENST00000445181 DACH2Q96NX9 599 aa21.22■□□□□ 0.99
C9orf3-207ENST00000445181 POLR2J2Q9GZM3 115 aaKnown RBP21.22■□□□□ 0.99
C9orf3-207ENST00000445181 POLR2J3Q9H1A7 115 aaKnown RBP21.22■□□□□ 0.99
C9orf3-207ENST00000445181 PARPBPQ9NWS1 579 aa21.22■□□□□ 0.99
C9orf3-207ENST00000445181 PRSS50Q9UI38 385 aa21.22■□□□□ 0.99
C9orf3-207ENST00000445181 RPS6KA6Q9UK32 745 aa21.22■□□□□ 0.99
C9orf3-207ENST00000445181 RASD1Q9Y272 281 aa21.22■□□□□ 0.99
C9orf3-207ENST00000445181 FLVCR1Q9Y5Y0 555 aa21.22■□□□□ 0.99
C9orf3-207ENST00000445181 FAM221AA4D161 298 aa21.21■□□□□ 0.99
C9orf3-207ENST00000445181 OR5F1O95221 314 aa21.21■□□□□ 0.99
C9orf3-207ENST00000445181 ADAP00813 363 aa21.21■□□□□ 0.99
C9orf3-207ENST00000445181 IFNW1P05000 195 aa21.21■□□□□ 0.99
C9orf3-207ENST00000445181 CALB2P22676 271 aa21.21■□□□□ 0.99
C9orf3-207ENST00000445181 GRPRP30550 384 aa21.21■□□□□ 0.99
C9orf3-207ENST00000445181 DNAJA1P31689 397 aaKnown RBP21.21■□□□□ 0.99
C9orf3-207ENST00000445181 IFNA8P32881 189 aa21.21■□□□□ 0.99
C9orf3-207ENST00000445181 PIN1Q13526 163 aaPredicted RBP21.21■□□□□ 0.99
C9orf3-207ENST00000445181 MFSD13AQ14CX5 517 aa21.21■□□□□ 0.99
C9orf3-207ENST00000445181 IFI44LQ53G44 452 aa21.21■□□□□ 0.99
C9orf3-207ENST00000445181 ANKRD34AQ69YU3 496 aa21.21■□□□□ 0.99
C9orf3-207ENST00000445181 LINC00114Q6XXX2 140 aa21.21■□□□□ 0.99
C9orf3-207ENST00000445181 STAC2Q6ZMT1 411 aa21.21■□□□□ 0.99
C9orf3-207ENST00000445181 WDR88Q6ZMY6 472 aa21.21■□□□□ 0.99
C9orf3-207ENST00000445181 GEMIN6Q8WXD5 167 aaKnown RBP21.21■□□□□ 0.99
C9orf3-207ENST00000445181 HSH2DQ96JZ2 352 aa21.21■□□□□ 0.99
C9orf3-207ENST00000445181 ASPNQ9BXN1 380 aa21.21■□□□□ 0.99
C9orf3-207ENST00000445181 CLEC4MQ9H2X3 399 aaPredicted RBP21.21■□□□□ 0.99
C9orf3-207ENST00000445181 SEC14L4Q9UDX3 406 aa21.21■□□□□ 0.99
C9orf3-207ENST00000445181 RIMS3Q9UJD0 308 aa21.21■□□□□ 0.99
C9orf3-207ENST00000445181 FREM1Q5H8C1 2179 aa21.2■□□□□ 0.98
C9orf3-207ENST00000445181 M0R082 166 aa21.2■□□□□ 0.98
C9orf3-207ENST00000445181 KPNA4O00629 521 aaPredicted RBP21.2■□□□□ 0.98
C9orf3-207ENST00000445181 LYPD3O95274 346 aa21.2■□□□□ 0.98
C9orf3-207ENST00000445181 IGHV3-9P01782 118 aa21.2■□□□□ 0.98
C9orf3-207ENST00000445181 HSD17B1P14061 328 aa21.2■□□□□ 0.98
C9orf3-207ENST00000445181 NQO1P15559 274 aaKnown RBP21.2■□□□□ 0.98
C9orf3-207ENST00000445181 EDNRAP25101 427 aa21.2■□□□□ 0.98
C9orf3-207ENST00000445181 CCKARP32238 428 aa21.2■□□□□ 0.98
C9orf3-207ENST00000445181 P2RY4P51582 365 aa21.2■□□□□ 0.98
C9orf3-207ENST00000445181 FBXW10Q5XX13 1052 aa21.2■□□□□ 0.98
C9orf3-207ENST00000445181 Q6ZT83 130 aa21.2■□□□□ 0.98
C9orf3-207ENST00000445181 GABRG1Q8N1C3 465 aa21.2■□□□□ 0.98
C9orf3-207ENST00000445181 OR6S1Q8NH40 331 aa21.2■□□□□ 0.98
C9orf3-207ENST00000445181 ZNF417Q8TAU3 575 aa21.2■□□□□ 0.98
C9orf3-207ENST00000445181 WFIKKN1Q96NZ8 548 aa21.2■□□□□ 0.98
C9orf3-207ENST00000445181 ZNF587Q96SQ5 575 aaPredicted RBP21.2■□□□□ 0.98
C9orf3-207ENST00000445181 TESMINQ9Y4I5 508 aa21.2■□□□□ 0.98
C9orf3-207ENST00000445181 SPG11Q96JI7 2443 aa21.19■□□□□ 0.98
C9orf3-207ENST00000445181 IL32P24001 234 aa21.19■□□□□ 0.98
C9orf3-207ENST00000445181 MSX2P35548 267 aaPredicted RBP21.19■□□□□ 0.98
C9orf3-207ENST00000445181 P2RY6Q15077 328 aa21.19■□□□□ 0.98
C9orf3-207ENST00000445181 H1FNTQ75WM6 255 aaPredicted RBP21.19■□□□□ 0.98
C9orf3-207ENST00000445181 TRPM8Q7Z2W7 1104 aa21.19■□□□□ 0.98
C9orf3-207ENST00000445181 KDM8Q8N371 416 aa21.19■□□□□ 0.98
C9orf3-207ENST00000445181 RBM15BQ8NDT2 890 aaKnown RBP21.19■□□□□ 0.98
C9orf3-207ENST00000445181 ZC3HAV1LQ96H79 300 aaKnown RBP21.19■□□□□ 0.98
C9orf3-207ENST00000445181 HDHD5Q9BXW7 423 aa21.19■□□□□ 0.98
C9orf3-207ENST00000445181 ZNF226Q9NYT6 803 aa21.19■□□□□ 0.98
C9orf3-207ENST00000445181 CD300AQ9UGN4 299 aa21.19■□□□□ 0.98
C9orf3-207ENST00000445181 MAGEL2Q9UJ55 1249 aa21.19■□□□□ 0.98
C9orf3-207ENST00000445181 SAMD4AQ9UPU9 718 aaKnown RBP21.19■□□□□ 0.98
C9orf3-207ENST00000445181 B3GALT5Q9Y2C3 310 aa21.19■□□□□ 0.98
C9orf3-207ENST00000445181 GPR52Q9Y2T5 361 aa21.19■□□□□ 0.98
C9orf3-207ENST00000445181 CORINQ9Y5Q5 1042 aa21.19■□□□□ 0.98
C9orf3-207ENST00000445181 BGLAPP02818 100 aa21.18■□□□□ 0.98
C9orf3-207ENST00000445181 ZNF43P17038 809 aa21.18■□□□□ 0.98
C9orf3-207ENST00000445181 PSMB1P20618 241 aaKnown RBP21.18■□□□□ 0.98
C9orf3-207ENST00000445181 YAP1P46937 504 aaKnown RBP21.18■□□□□ 0.98
C9orf3-207ENST00000445181 PMS2P3Q13401 168 aa21.18■□□□□ 0.98
C9orf3-207ENST00000445181 C1DQ13901 141 aaKnown RBP21.18■□□□□ 0.98
C9orf3-207ENST00000445181 FBXW9Q5XUX1 488 aa21.18■□□□□ 0.98
C9orf3-207ENST00000445181 SPNS3Q6ZMD2 512 aa21.18■□□□□ 0.98
C9orf3-207ENST00000445181 AAED1Q7RTV5 226 aa21.18■□□□□ 0.98
C9orf3-207ENST00000445181 CDC20BQ86Y33 519 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms