RNA–Protein interactions for RNA: ENST00000445064.1

SEC13-213, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 5

Gene SEC13, Length 669 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-213ENST00000445064 BCL2L2Q92843 193 aaPredicted RBP13.46□□□□□ -0.25
SEC13-213ENST00000445064 SORCS2Q96PQ0 1159 aa13.46□□□□□ -0.25
SEC13-213ENST00000445064 SLC38A2Q96QD8 506 aa13.46□□□□□ -0.25
SEC13-213ENST00000445064 TPT1P8Q9HAU6 139 aa13.46□□□□□ -0.25
SEC13-213ENST00000445064 CALML5Q9NZT1 146 aa13.46□□□□□ -0.25
SEC13-213ENST00000445064 PRDM4Q9UKN5 801 aa13.46□□□□□ -0.25
SEC13-213ENST00000445064 FBN3Q75N90 2809 aa13.46□□□□□ -0.25
SEC13-213ENST00000445064 A0A096LPE4 126 aa13.45□□□□□ -0.26
SEC13-213ENST00000445064 A0A0G2JPF8 293 aa13.45□□□□□ -0.26
SEC13-213ENST00000445064 A0A1W2PPZ6 126 aa13.45□□□□□ -0.26
SEC13-213ENST00000445064 HNRNPCL2B2RXH8 293 aa13.45□□□□□ -0.26
SEC13-213ENST00000445064 HNRNPCL3B7ZW38 293 aa13.45□□□□□ -0.26
SEC13-213ENST00000445064 PHF1O43189 567 aaPredicted RBP13.45□□□□□ -0.26
SEC13-213ENST00000445064 FRS3O43559 492 aa13.45□□□□□ -0.26
SEC13-213ENST00000445064 HNRNPCL1O60812 293 aaKnown RBP13.45□□□□□ -0.26
SEC13-213ENST00000445064 NPIPB7O75200 414 aa13.45□□□□□ -0.26
SEC13-213ENST00000445064 SNNO75324 88 aaPredicted RBP13.45□□□□□ -0.26
SEC13-213ENST00000445064 UPK3AO75631 287 aa13.45□□□□□ -0.26
SEC13-213ENST00000445064 VAMP5O95183 116 aa13.45□□□□□ -0.26
SEC13-213ENST00000445064 CSF3P09919 207 aa13.45□□□□□ -0.26
SEC13-213ENST00000445064 ZCCHC18P0CG32 403 aa13.45□□□□□ -0.26
SEC13-213ENST00000445064 HNRNPCL4P0DMR1 293 aa13.45□□□□□ -0.26
SEC13-213ENST00000445064 IDO1P14902 403 aa13.45□□□□□ -0.26
SEC13-213ENST00000445064 ZNF16P17020 682 aaPredicted RBP13.45□□□□□ -0.26
SEC13-213ENST00000445064 TUBA1BP68363 451 aa13.45□□□□□ -0.26
SEC13-213ENST00000445064 TUBA4AP68366 448 aa13.45□□□□□ -0.26
SEC13-213ENST00000445064 HOXC5Q00444 222 aa13.45□□□□□ -0.26
SEC13-213ENST00000445064 GGTLC2Q14390 218 aa13.45□□□□□ -0.26
SEC13-213ENST00000445064 LARS2Q15031 903 aaKnown RBP13.45□□□□□ -0.26
SEC13-213ENST00000445064 SLC9B1Q4ZJI4 515 aa13.45□□□□□ -0.26
SEC13-213ENST00000445064 PRAMEF8Q5VWM4 474 aa13.45□□□□□ -0.26
SEC13-213ENST00000445064 PRAMEF7Q5VXH5 474 aa13.45□□□□□ -0.26
SEC13-213ENST00000445064 ATG16L1Q676U5 607 aa13.45□□□□□ -0.26
SEC13-213ENST00000445064 ANKRD16Q6P6B7 361 aa13.45□□□□□ -0.26
SEC13-213ENST00000445064 TUBA1AQ71U36 451 aa13.45□□□□□ -0.26
SEC13-213ENST00000445064 SERPINA11Q86U17 422 aa13.45□□□□□ -0.26
SEC13-213ENST00000445064 C3orf49Q96BT1 292 aa13.45□□□□□ -0.26
SEC13-213ENST00000445064 SLC25A36Q96CQ1 311 aa13.45□□□□□ -0.26
SEC13-213ENST00000445064 TMEM19Q96HH6 336 aa13.45□□□□□ -0.26
SEC13-213ENST00000445064 FOXN4Q96NZ1 517 aa13.45□□□□□ -0.26
SEC13-213ENST00000445064 ALKBH3Q96Q83 286 aaPredicted RBP13.45□□□□□ -0.26
SEC13-213ENST00000445064 VRK1Q99986 396 aaPredicted RBP13.45□□□□□ -0.26
SEC13-213ENST00000445064 KCNS3Q9BQ31 491 aa13.45□□□□□ -0.26
SEC13-213ENST00000445064 SPATA9Q9BWV2 254 aa13.45□□□□□ -0.26
SEC13-213ENST00000445064 OBP2BQ9NPH6 170 aa13.45□□□□□ -0.26
SEC13-213ENST00000445064 TMEM160Q9NX00 188 aa13.45□□□□□ -0.26
SEC13-213ENST00000445064 COL6A5A8TX70 2615 aa13.45□□□□□ -0.26
SEC13-213ENST00000445064 VWC2LB2RUY7 222 aa13.44□□□□□ -0.26
SEC13-213ENST00000445064 ZNF587BE7ETH6 402 aa13.44□□□□□ -0.26
SEC13-213ENST00000445064 LMX1BO60663 402 aa13.44□□□□□ -0.26
SEC13-213ENST00000445064 CRYAAP02489 173 aa13.44□□□□□ -0.26
SEC13-213ENST00000445064 SERPINF1P36955 418 aa13.44□□□□□ -0.26
SEC13-213ENST00000445064 PDLIM4P50479 330 aa13.44□□□□□ -0.26
SEC13-213ENST00000445064 UBE2NP61088 152 aaKnown RBP13.44□□□□□ -0.26
SEC13-213ENST00000445064 CARTPTQ16568 116 aa13.44□□□□□ -0.26
SEC13-213ENST00000445064 ZNF311Q5JNZ3 666 aa13.44□□□□□ -0.26
SEC13-213ENST00000445064 RNF220Q5VTB9 566 aa13.44□□□□□ -0.26
SEC13-213ENST00000445064 VHLLQ6RSH7 139 aa13.44□□□□□ -0.26
SEC13-213ENST00000445064 ANKS4BQ8N8V4 417 aa13.44□□□□□ -0.26
SEC13-213ENST00000445064 VPS33AQ96AX1 596 aa13.44□□□□□ -0.26
SEC13-213ENST00000445064 ITCHQ96J02 903 aa13.44□□□□□ -0.26
SEC13-213ENST00000445064 MAELQ96JY0 434 aaKnown RBP13.44□□□□□ -0.26
SEC13-213ENST00000445064 SHARPINQ9H0F6 387 aa13.44□□□□□ -0.26
SEC13-213ENST00000445064 CA10Q9NS85 328 aa13.44□□□□□ -0.26
SEC13-213ENST00000445064 RASD1Q9Y272 281 aa13.44□□□□□ -0.26
SEC13-213ENST00000445064 CUBNO60494 3623 aa13.44□□□□□ -0.26
SEC13-213ENST00000445064 TMEM120BA0PK00 339 aa13.43□□□□□ -0.26
SEC13-213ENST00000445064 TMEM229AB2RXF0 380 aa13.43□□□□□ -0.26
SEC13-213ENST00000445064 SLCO1B7G3V0H7 640 aa13.43□□□□□ -0.26
SEC13-213ENST00000445064 AHSA1O95433 338 aa13.43□□□□□ -0.26
SEC13-213ENST00000445064 NUDT7P0C024 238 aa13.43□□□□□ -0.26
SEC13-213ENST00000445064 PNMTP11086 282 aa13.43□□□□□ -0.26
SEC13-213ENST00000445064 NR4A2P43354 598 aa13.43□□□□□ -0.26
SEC13-213ENST00000445064 RPS5P46782 204 aaKnown RBP13.43□□□□□ -0.26
SEC13-213ENST00000445064 POLR2JP52435 117 aaKnown RBP13.43□□□□□ -0.26
SEC13-213ENST00000445064 CLDN17P56750 224 aa13.43□□□□□ -0.26
SEC13-213ENST00000445064 SNRPD2P62316 118 aaKnown RBP13.43□□□□□ -0.26
SEC13-213ENST00000445064 ROR2Q01974 943 aaKnown RBP13.43□□□□□ -0.26
SEC13-213ENST00000445064 NAAAQ02083 359 aa13.43□□□□□ -0.26
SEC13-213ENST00000445064 EGR4Q05215 589 aa13.43□□□□□ -0.26
SEC13-213ENST00000445064 ZSWIM7Q19AV6 140 aa13.43□□□□□ -0.26
SEC13-213ENST00000445064 C6orf10Q5SRN2 563 aa13.43□□□□□ -0.26
SEC13-213ENST00000445064 SLC46A3Q7Z3Q1 461 aa13.43□□□□□ -0.26
SEC13-213ENST00000445064 MAVSQ7Z434 540 aa13.43□□□□□ -0.26
SEC13-213ENST00000445064 OR9I1Q8NGQ6 314 aa13.43□□□□□ -0.26
SEC13-213ENST00000445064 MFSD8Q8NHS3 518 aa13.43□□□□□ -0.26
SEC13-213ENST00000445064 STK35Q8TDR2 534 aa13.43□□□□□ -0.26
SEC13-213ENST00000445064 KTI12Q96EK9 354 aaPredicted RBP13.43□□□□□ -0.26
SEC13-213ENST00000445064 OR52B2Q96RD2 323 aa13.43□□□□□ -0.26
SEC13-213ENST00000445064 KATNB1Q9BVA0 655 aa13.43□□□□□ -0.26
SEC13-213ENST00000445064 PRR14Q9BWN1 585 aa13.43□□□□□ -0.26
SEC13-213ENST00000445064 LINC00470Q9BZP3 86 aa13.43□□□□□ -0.26
SEC13-213ENST00000445064 ARMC7Q9H6L4 198 aa13.43□□□□□ -0.26
SEC13-213ENST00000445064 RMND5AQ9H871 391 aa13.43□□□□□ -0.26
SEC13-213ENST00000445064 SEC61A2Q9H9S3 476 aa13.43□□□□□ -0.26
SEC13-213ENST00000445064 CACYBPQ9HB71 228 aaKnown RBP13.43□□□□□ -0.26
SEC13-213ENST00000445064 ZIM2Q9NZV7 527 aa13.43□□□□□ -0.26
SEC13-213ENST00000445064 SEC14L4Q9UDX3 406 aa13.43□□□□□ -0.26
SEC13-213ENST00000445064 IFT52Q9Y366 437 aa13.43□□□□□ -0.26
SEC13-213ENST00000445064 FKBP7Q9Y680 259 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms