RNA–Protein interactions for RNA: ENST00000444867.1

SEMA3D-202, Transcript of semaphorin 3D, humanhuman

TSL 1 (best) BASIC

Gene SEMA3D, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3D-202ENST00000444867 COL28A1Q2UY09 1125 aa17.13■□□□□ 0.33
SEMA3D-202ENST00000444867 GXYLT1Q4G148 440 aa17.13■□□□□ 0.33
SEMA3D-202ENST00000444867 FAM198BQ6UWH4 519 aa17.13■□□□□ 0.33
SEMA3D-202ENST00000444867 Q6ZNX1 250 aa17.13■□□□□ 0.33
SEMA3D-202ENST00000444867 C16orf47Q6ZP98 133 aaPredicted RBP17.13■□□□□ 0.33
SEMA3D-202ENST00000444867 ARIH2OSQ8N7S6 290 aa17.13■□□□□ 0.33
SEMA3D-202ENST00000444867 OR6S1Q8NH40 331 aa17.13■□□□□ 0.33
SEMA3D-202ENST00000444867 MR1Q95460 341 aa17.13■□□□□ 0.33
SEMA3D-202ENST00000444867 SLC25A46Q96AG3 418 aa17.13■□□□□ 0.33
SEMA3D-202ENST00000444867 RASD2Q96D21 266 aa17.13■□□□□ 0.33
SEMA3D-202ENST00000444867 MRPL48Q96GC5 212 aaKnown RBP17.13■□□□□ 0.33
SEMA3D-202ENST00000444867 NMNAT3Q96T66 252 aa17.13■□□□□ 0.33
SEMA3D-202ENST00000444867 TBX5Q99593 518 aa17.13■□□□□ 0.33
SEMA3D-202ENST00000444867 ISG20L2Q9H9L3 353 aaKnown RBP17.13■□□□□ 0.33
SEMA3D-202ENST00000444867 SLC39A1Q9NY26 324 aa17.13■□□□□ 0.33
SEMA3D-202ENST00000444867 POLHQ9Y253 713 aa17.13■□□□□ 0.33
SEMA3D-202ENST00000444867 YARS2Q9Y2Z4 477 aaKnown RBP17.13■□□□□ 0.33
SEMA3D-202ENST00000444867 TEX13CA0A0J9YWL9 993 aa17.12■□□□□ 0.33
SEMA3D-202ENST00000444867 IQCMA0A1B0GVH7 501 aa17.12■□□□□ 0.33
SEMA3D-202ENST00000444867 OR6C68A6NDL8 312 aa17.12■□□□□ 0.33
SEMA3D-202ENST00000444867 GMFGO60234 142 aa17.12■□□□□ 0.33
SEMA3D-202ENST00000444867 ZNF354AO60765 605 aaPredicted RBP17.12■□□□□ 0.33
SEMA3D-202ENST00000444867 NPIPB7O75200 414 aa17.12■□□□□ 0.33
SEMA3D-202ENST00000444867 CD63P08962 238 aa17.12■□□□□ 0.33
SEMA3D-202ENST00000444867 SPI1P17947 270 aa17.12■□□□□ 0.33
SEMA3D-202ENST00000444867 MSX1P28360 303 aa17.12■□□□□ 0.33
SEMA3D-202ENST00000444867 AVPR2P30518 371 aa17.12■□□□□ 0.33
SEMA3D-202ENST00000444867 RPS5P46782 204 aaKnown RBP17.12■□□□□ 0.33
SEMA3D-202ENST00000444867 ACTA2P62736 377 aa17.12■□□□□ 0.33
SEMA3D-202ENST00000444867 ACTG2P63267 376 aa17.12■□□□□ 0.33
SEMA3D-202ENST00000444867 PCOLCEQ15113 449 aa17.12■□□□□ 0.33
SEMA3D-202ENST00000444867 RGS21Q2M5E4 152 aa17.12■□□□□ 0.33
SEMA3D-202ENST00000444867 TBC1D25Q3MII6 688 aa17.12■□□□□ 0.33
SEMA3D-202ENST00000444867 ZNF517Q6ZMY9 492 aaPredicted RBP17.12■□□□□ 0.33
SEMA3D-202ENST00000444867 ADGRG3Q86Y34 549 aa17.12■□□□□ 0.33
SEMA3D-202ENST00000444867 ZFP41Q8N8Y5 198 aa17.12■□□□□ 0.33
SEMA3D-202ENST00000444867 ELP5Q8TE02 316 aa17.12■□□□□ 0.33
SEMA3D-202ENST00000444867 THAP3Q8WTV1 239 aaPredicted RBP17.12■□□□□ 0.33
SEMA3D-202ENST00000444867 CHPT1Q8WUD6 406 aa17.12■□□□□ 0.33
SEMA3D-202ENST00000444867 ATOH1Q92858 354 aaPredicted RBP17.12■□□□□ 0.33
SEMA3D-202ENST00000444867 C8orf44Q96CB5 159 aa17.12■□□□□ 0.33
SEMA3D-202ENST00000444867 Q96M85 177 aa17.12■□□□□ 0.33
SEMA3D-202ENST00000444867 TM9SF2Q99805 663 aa17.12■□□□□ 0.33
SEMA3D-202ENST00000444867 LRFN3Q9BTN0 628 aa17.12■□□□□ 0.33
SEMA3D-202ENST00000444867 DEFB126Q9BYW3 111 aa17.12■□□□□ 0.33
SEMA3D-202ENST00000444867 ULBP3Q9BZM4 244 aa17.12■□□□□ 0.33
SEMA3D-202ENST00000444867 AKIRIN1Q9H9L7 192 aaPredicted RBP17.12■□□□□ 0.33
SEMA3D-202ENST00000444867 SMURF1Q9HCE7 757 aa17.12■□□□□ 0.33
SEMA3D-202ENST00000444867 SDHAF3Q9NRP4 125 aa17.12■□□□□ 0.33
SEMA3D-202ENST00000444867 SNTG1Q9NSN8 517 aa17.12■□□□□ 0.33
SEMA3D-202ENST00000444867 MOKQ9UQ07 419 aa17.12■□□□□ 0.33
SEMA3D-202ENST00000444867 PCNX3Q9H6A9 2034 aa17.12■□□□□ 0.33
SEMA3D-202ENST00000444867 TMEM72A0PK05 275 aa17.11■□□□□ 0.33
SEMA3D-202ENST00000444867 C17orf51A8MQB3 221 aa17.11■□□□□ 0.33
SEMA3D-202ENST00000444867 RNF13O43567 381 aa17.11■□□□□ 0.33
SEMA3D-202ENST00000444867 SULT1C4O75897 302 aa17.11■□□□□ 0.33
SEMA3D-202ENST00000444867 GLCEO94923 617 aa17.11■□□□□ 0.33
SEMA3D-202ENST00000444867 HSF2Q03933 536 aa17.11■□□□□ 0.33
SEMA3D-202ENST00000444867 FAM69AQ5T7M9 428 aa17.11■□□□□ 0.33
SEMA3D-202ENST00000444867 LEG1Q6P5S2 330 aa17.11■□□□□ 0.33
SEMA3D-202ENST00000444867 LYPD8Q6UX82 237 aa17.11■□□□□ 0.33
SEMA3D-202ENST00000444867 BTLAQ7Z6A9 289 aa17.11■□□□□ 0.33
SEMA3D-202ENST00000444867 SYS1Q8N2H4 156 aa17.11■□□□□ 0.33
SEMA3D-202ENST00000444867 LSM14AQ8ND56 463 aaKnown RBP17.11■□□□□ 0.33
SEMA3D-202ENST00000444867 ZMYND19Q96E35 227 aaPredicted RBP17.11■□□□□ 0.33
SEMA3D-202ENST00000444867 CMKLR1Q99788 373 aa17.11■□□□□ 0.33
SEMA3D-202ENST00000444867 PTDSS2Q9BVG9 487 aa17.11■□□□□ 0.33
SEMA3D-202ENST00000444867 BARHL1Q9BZE3 327 aa17.11■□□□□ 0.33
SEMA3D-202ENST00000444867 ZNF700Q9H0M5 742 aa17.11■□□□□ 0.33
SEMA3D-202ENST00000444867 GALNT8Q9NY28 637 aa17.11■□□□□ 0.33
SEMA3D-202ENST00000444867 GRHPRQ9UBQ7 328 aa17.11■□□□□ 0.33
SEMA3D-202ENST00000444867 A0A1W2PQL4 384 aaPredicted RBP17.1■□□□□ 0.33
SEMA3D-202ENST00000444867 OR2T1O43869 369 aa17.1■□□□□ 0.33
SEMA3D-202ENST00000444867 GDF9O60383 454 aa17.1■□□□□ 0.33
SEMA3D-202ENST00000444867 FBXO45P0C2W1 286 aa17.1■□□□□ 0.33
SEMA3D-202ENST00000444867 EXT1Q16394 746 aa17.1■□□□□ 0.33
SEMA3D-202ENST00000444867 SGCBQ16585 318 aa17.1■□□□□ 0.33
SEMA3D-202ENST00000444867 PLA2G2CQ5R387 149 aa17.1■□□□□ 0.33
SEMA3D-202ENST00000444867 C1orf140Q5VVS0 124 aa17.1■□□□□ 0.33
SEMA3D-202ENST00000444867 VASNQ6EMK4 673 aa17.1■□□□□ 0.33
SEMA3D-202ENST00000444867 TCEAL6Q6IPX3 200 aa17.1■□□□□ 0.33
SEMA3D-202ENST00000444867 VASH1Q7L8A9 365 aaPredicted RBP17.1■□□□□ 0.33
SEMA3D-202ENST00000444867 SLC35F2Q8IXU6 374 aa17.1■□□□□ 0.33
SEMA3D-202ENST00000444867 TCEAL3Q969E4 200 aa17.1■□□□□ 0.33
SEMA3D-202ENST00000444867 RYDENQ9NUL5 291 aaKnown RBP17.1■□□□□ 0.33
SEMA3D-202ENST00000444867 PTRH2Q9Y3E5 179 aaKnown RBP17.1■□□□□ 0.33
SEMA3D-202ENST00000444867 IGLV3-32A0A0A0MS00 114 aa17.1■□□□□ 0.33
SEMA3D-202ENST00000444867 TNFSF12-TNFSF13A0A0A6YY99 330 aa17.1■□□□□ 0.33
SEMA3D-202ENST00000444867 GABRPO00591 440 aa17.1■□□□□ 0.33
SEMA3D-202ENST00000444867 PLPP2O43688 288 aa17.1■□□□□ 0.33
SEMA3D-202ENST00000444867 RGS9O75916 674 aaPredicted RBP17.1■□□□□ 0.33
SEMA3D-202ENST00000444867 AHSA1O95433 338 aa17.1■□□□□ 0.33
SEMA3D-202ENST00000444867 IGHEP01854 428 aa17.1■□□□□ 0.33
SEMA3D-202ENST00000444867 APOBEC1P41238 236 aaKnown RBP17.1■□□□□ 0.33
SEMA3D-202ENST00000444867 CDKN2AP42771 156 aaKnown RBP17.1■□□□□ 0.33
SEMA3D-202ENST00000444867 KRR1Q13601 381 aaKnown RBP17.1■□□□□ 0.33
SEMA3D-202ENST00000444867 NTRK2Q16620 822 aa17.1■□□□□ 0.33
SEMA3D-202ENST00000444867 POMZP3Q6PJE2 187 aa17.1■□□□□ 0.33
SEMA3D-202ENST00000444867 CCDC190Q86UF4 302 aa17.1■□□□□ 0.33
SEMA3D-202ENST00000444867 EXD3Q8N9H8 876 aa17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms