RNA–Protein interactions for RNA: ENST00000444533.5

SSBP3-208, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 560 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-208ENST00000444533 FKRPQ9H9S5 495 aa12.57□□□□□ -0.4
SSBP3-208ENST00000444533 BCO1Q9HAY6 547 aa12.57□□□□□ -0.4
SSBP3-208ENST00000444533 IL1RAPQ9NPH3 570 aa12.57□□□□□ -0.4
SSBP3-208ENST00000444533 NDUFAF4Q9P032 175 aa12.57□□□□□ -0.4
SSBP3-208ENST00000444533 RHCGQ9UBD6 479 aa12.57□□□□□ -0.4
SSBP3-208ENST00000444533 A4GNTQ9UNA3 340 aa12.57□□□□□ -0.4
SSBP3-208ENST00000444533 IGKV1D-42A0A075B6H8 117 aa12.56□□□□□ -0.4
SSBP3-208ENST00000444533 J3KTA2 159 aa12.56□□□□□ -0.4
SSBP3-208ENST00000444533 TNFSF13O75888 250 aa12.56□□□□□ -0.4
SSBP3-208ENST00000444533 GADD45GO95257 159 aa12.56□□□□□ -0.4
SSBP3-208ENST00000444533 CH25HO95992 272 aa12.56□□□□□ -0.4
SSBP3-208ENST00000444533 IGF2P01344 180 aa12.56□□□□□ -0.4
SSBP3-208ENST00000444533 PTNP21246 168 aa12.56□□□□□ -0.4
SSBP3-208ENST00000444533 ATP6V1B2P21281 511 aa12.56□□□□□ -0.4
SSBP3-208ENST00000444533 CBLP22681 906 aa12.56□□□□□ -0.4
SSBP3-208ENST00000444533 GRPRP30550 384 aa12.56□□□□□ -0.4
SSBP3-208ENST00000444533 SPIBQ01892 262 aa12.56□□□□□ -0.4
SSBP3-208ENST00000444533 VWA1Q6PCB0 445 aa12.56□□□□□ -0.4
SSBP3-208ENST00000444533 BTLAQ7Z6A9 289 aa12.56□□□□□ -0.4
SSBP3-208ENST00000444533 LIX1LQ8IVB5 337 aa12.56□□□□□ -0.4
SSBP3-208ENST00000444533 NKAIN4Q8IVV8 208 aa12.56□□□□□ -0.4
SSBP3-208ENST00000444533 CCDC103Q8IW40 242 aa12.56□□□□□ -0.4
SSBP3-208ENST00000444533 TMEM255BQ8WV15 326 aa12.56□□□□□ -0.4
SSBP3-208ENST00000444533 ACOT11Q8WXI4 607 aaPredicted RBP12.56□□□□□ -0.4
SSBP3-208ENST00000444533 RNASE6Q93091 150 aaKnown RBP12.56□□□□□ -0.4
SSBP3-208ENST00000444533 STARD4Q96DR4 205 aa12.56□□□□□ -0.4
SSBP3-208ENST00000444533 SGTBQ96EQ0 304 aa12.56□□□□□ -0.4
SSBP3-208ENST00000444533 RSRC1Q96IZ7 334 aaKnown RBP12.56□□□□□ -0.4
SSBP3-208ENST00000444533 PTDSS2Q9BVG9 487 aa12.56□□□□□ -0.4
SSBP3-208ENST00000444533 CADM1Q9BY67 442 aaKnown RBP12.56□□□□□ -0.4
SSBP3-208ENST00000444533 NMNAT1Q9HAN9 279 aaPredicted RBP12.56□□□□□ -0.4
SSBP3-208ENST00000444533 PLSCR4Q9NRQ2 329 aa12.56□□□□□ -0.4
SSBP3-208ENST00000444533 ELOVL5Q9NYP7 299 aa12.56□□□□□ -0.4
SSBP3-208ENST00000444533 PLEKHB1Q9UF11 243 aaPredicted RBP12.56□□□□□ -0.4
SSBP3-208ENST00000444533 ZNF229Q9UJW7 825 aa12.56□□□□□ -0.4
SSBP3-208ENST00000444533 TMCC3Q9ULS5 477 aa12.56□□□□□ -0.4
SSBP3-208ENST00000444533 AURKCQ9UQB9 309 aa12.56□□□□□ -0.4
SSBP3-208ENST00000444533 TMEM5Q9Y2B1 443 aa12.56□□□□□ -0.4
SSBP3-208ENST00000444533 DOCK7Q96N67 2140 aa12.56□□□□□ -0.4
SSBP3-208ENST00000444533 NCOA6Q14686 2063 aaPredicted RBP12.55□□□□□ -0.4
SSBP3-208ENST00000444533 PCNX1Q96RV3 2341 aa12.55□□□□□ -0.4
SSBP3-208ENST00000444533 IGKV3D-15A0A087WSY6 115 aa12.55□□□□□ -0.4
SSBP3-208ENST00000444533 A0A1W2PRQ8 180 aa12.55□□□□□ -0.4
SSBP3-208ENST00000444533 ENO4A6NNW6 628 aa12.55□□□□□ -0.4
SSBP3-208ENST00000444533 M0R082 166 aa12.55□□□□□ -0.4
SSBP3-208ENST00000444533 KRT33AO76009 404 aa12.55□□□□□ -0.4
SSBP3-208ENST00000444533 KRT36O76013 467 aa12.55□□□□□ -0.4
SSBP3-208ENST00000444533 RNF224P0DH78 156 aa12.55□□□□□ -0.4
SSBP3-208ENST00000444533 RAP2AP10114 183 aa12.55□□□□□ -0.4
SSBP3-208ENST00000444533 AHCYP23526 432 aa12.55□□□□□ -0.4
SSBP3-208ENST00000444533 IFNGR2P38484 337 aa12.55□□□□□ -0.4
SSBP3-208ENST00000444533 SLC16A1P53985 500 aa12.55□□□□□ -0.4
SSBP3-208ENST00000444533 VLDLRP98155 873 aa12.55□□□□□ -0.4
SSBP3-208ENST00000444533 MS4A2Q01362 244 aa12.55□□□□□ -0.4
SSBP3-208ENST00000444533 DGCR6Q14129 220 aa12.55□□□□□ -0.4
SSBP3-208ENST00000444533 EXOC3L2Q2M3D2 409 aa12.55□□□□□ -0.4
SSBP3-208ENST00000444533 C1orf146Q5VVC0 180 aa12.55□□□□□ -0.4
SSBP3-208ENST00000444533 PGM2L1Q6PCE3 622 aa12.55□□□□□ -0.4
SSBP3-208ENST00000444533 CASP12Q6UXS9 341 aa12.55□□□□□ -0.4
SSBP3-208ENST00000444533 NANOGNBQ7Z5D8 188 aa12.55□□□□□ -0.4
SSBP3-208ENST00000444533 UEVLDQ8IX04 471 aa12.55□□□□□ -0.4
SSBP3-208ENST00000444533 UBE2J2Q8N2K1 259 aa12.55□□□□□ -0.4
SSBP3-208ENST00000444533 FAM86B1Q8N7N1 296 aa12.55□□□□□ -0.4
SSBP3-208ENST00000444533 RELL2Q8NC24 303 aaPredicted RBP12.55□□□□□ -0.4
SSBP3-208ENST00000444533 ADPRHL1Q8NDY3 354 aa12.55□□□□□ -0.4
SSBP3-208ENST00000444533 OR9K2Q8NGE7 335 aa12.55□□□□□ -0.4
SSBP3-208ENST00000444533 OR5J2Q8NH18 312 aa12.55□□□□□ -0.4
SSBP3-208ENST00000444533 ZNF417Q8TAU3 575 aa12.55□□□□□ -0.4
SSBP3-208ENST00000444533 APH1AQ96BI3 265 aa12.55□□□□□ -0.4
SSBP3-208ENST00000444533 C7orf34Q96L11 122 aa12.55□□□□□ -0.4
SSBP3-208ENST00000444533 OXGR1Q96P68 337 aa12.55□□□□□ -0.4
SSBP3-208ENST00000444533 PSMG3-AS1Q96PY0 264 aa12.55□□□□□ -0.4
SSBP3-208ENST00000444533 ZNF587Q96SQ5 575 aaPredicted RBP12.55□□□□□ -0.4
SSBP3-208ENST00000444533 ZNF426Q9BUY5 554 aa12.55□□□□□ -0.4
SSBP3-208ENST00000444533 MRPL39Q9NYK5 338 aaKnown RBP12.55□□□□□ -0.4
SSBP3-208ENST00000444533 POMPQ9Y244 141 aa12.55□□□□□ -0.4
SSBP3-208ENST00000444533 DHRS12A0PJE2 317 aa12.54□□□□□ -0.4
SSBP3-208ENST00000444533 OR6C65A6NJZ3 312 aa12.54□□□□□ -0.4
SSBP3-208ENST00000444533 A8MXE2 369 aa12.54□□□□□ -0.4
SSBP3-208ENST00000444533 FTCDNL1E5RQL4 147 aa12.54□□□□□ -0.4
SSBP3-208ENST00000444533 GNGT2O14610 69 aa12.54□□□□□ -0.4
SSBP3-208ENST00000444533 ACOT8O14734 319 aa12.54□□□□□ -0.4
SSBP3-208ENST00000444533 BGLAPP02818 100 aa12.54□□□□□ -0.4
SSBP3-208ENST00000444533 THY1P04216 161 aa12.54□□□□□ -0.4
SSBP3-208ENST00000444533 ADORA3P0DMS8 318 aa12.54□□□□□ -0.4
SSBP3-208ENST00000444533 SAGP10523 405 aaPredicted RBP12.54□□□□□ -0.4
SSBP3-208ENST00000444533 IFI30P13284 250 aa12.54□□□□□ -0.4
SSBP3-208ENST00000444533 COX6B1P14854 86 aa12.54□□□□□ -0.4
SSBP3-208ENST00000444533 POU2F1P14859 743 aa12.54□□□□□ -0.4
SSBP3-208ENST00000444533 PUDPQ08623 228 aa12.54□□□□□ -0.4
SSBP3-208ENST00000444533 SLC17A1Q14916 467 aa12.54□□□□□ -0.4
SSBP3-208ENST00000444533 GUSBP1Q15486 140 aa12.54□□□□□ -0.4
SSBP3-208ENST00000444533 ZNF74Q16587 644 aa12.54□□□□□ -0.4
SSBP3-208ENST00000444533 FBXL19-AS1Q494R0 122 aa12.54□□□□□ -0.4
SSBP3-208ENST00000444533 WDR88Q6ZMY6 472 aa12.54□□□□□ -0.4
SSBP3-208ENST00000444533 ABHD12BQ7Z5M8 362 aaPredicted RBP12.54□□□□□ -0.4
SSBP3-208ENST00000444533 ZNF775Q96BV0 537 aaPredicted RBP12.54□□□□□ -0.4
SSBP3-208ENST00000444533 BPIFA2Q96DR5 249 aa12.54□□□□□ -0.4
SSBP3-208ENST00000444533 RAB3IPQ96QF0 476 aaPredicted RBP12.54□□□□□ -0.4
SSBP3-208ENST00000444533 PRSS27Q9BQR3 290 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms