RNA–Protein interactions for RNA: ENST00000444440.1

SF3A1-203, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 777 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-203ENST00000444440 ZNF83P51522 516 aa9.54□□□□□ -0.88
SF3A1-203ENST00000444440 MAP2K6P52564 334 aa9.54□□□□□ -0.88
SF3A1-203ENST00000444440 MTPNP58546 118 aa9.54□□□□□ -0.88
SF3A1-203ENST00000444440 COPZ1P61923 177 aa9.54□□□□□ -0.88
SF3A1-203ENST00000444440 SF3A3Q12874 501 aaKnown RBP eCLIP9.54□□□□□ -0.88
SF3A1-203ENST00000444440 SCARB2Q14108 478 aa9.54□□□□□ -0.88
SF3A1-203ENST00000444440 MAPRE2Q15555 327 aa9.54□□□□□ -0.88
SF3A1-203ENST00000444440 REEP3Q6NUK4 255 aa9.54□□□□□ -0.88
SF3A1-203ENST00000444440 DHRS4L2Q6PKH6 230 aa9.54□□□□□ -0.88
SF3A1-203ENST00000444440 C6orf89Q6UWU4 347 aa9.54□□□□□ -0.88
SF3A1-203ENST00000444440 PRSS57Q6UWY2 283 aa9.54□□□□□ -0.88
SF3A1-203ENST00000444440 GPAT4Q86UL3 456 aa9.54□□□□□ -0.88
SF3A1-203ENST00000444440 TSPYL5Q86VY4 417 aaPredicted RBP9.54□□□□□ -0.88
SF3A1-203ENST00000444440 EPHX4Q8IUS5 362 aa9.54□□□□□ -0.88
SF3A1-203ENST00000444440 WDFY1Q8IWB7 410 aa9.54□□□□□ -0.88
SF3A1-203ENST00000444440 DPP10Q8N608 796 aa9.54□□□□□ -0.88
SF3A1-203ENST00000444440 TAAR8Q969N4 342 aa9.54□□□□□ -0.88
SF3A1-203ENST00000444440 FBXW5Q969U6 566 aa9.54□□□□□ -0.88
SF3A1-203ENST00000444440 TMEM45BQ96B21 275 aa9.54□□□□□ -0.88
SF3A1-203ENST00000444440 MUS81Q96NY9 551 aa9.54□□□□□ -0.88
SF3A1-203ENST00000444440 NAA11Q9BSU3 229 aaPredicted RBP9.54□□□□□ -0.88
SF3A1-203ENST00000444440 SPATA5L1Q9BVQ7 753 aa9.54□□□□□ -0.88
SF3A1-203ENST00000444440 C1QTNF6Q9BXI9 259 aa9.54□□□□□ -0.88
SF3A1-203ENST00000444440 TMEM38AQ9H6F2 299 aa9.54□□□□□ -0.88
SF3A1-203ENST00000444440 KLHL14Q9P2G3 628 aa9.54□□□□□ -0.88
SF3A1-203ENST00000444440 B3GAT1Q9P2W7 334 aa9.54□□□□□ -0.88
SF3A1-203ENST00000444440 E7EQL1 145 aa9.53□□□□□ -0.88
SF3A1-203ENST00000444440 FBP2O00757 339 aa9.53□□□□□ -0.88
SF3A1-203ENST00000444440 SMAD7O15105 426 aaKnown RBP9.53□□□□□ -0.88
SF3A1-203ENST00000444440 ARHGEF9O43307 516 aa9.53□□□□□ -0.88
SF3A1-203ENST00000444440 NPPAP01160 153 aa9.53□□□□□ -0.88
SF3A1-203ENST00000444440 OPN1SWP03999 348 aa9.53□□□□□ -0.88
SF3A1-203ENST00000444440 CBLP22681 906 aa9.53□□□□□ -0.88
SF3A1-203ENST00000444440 SLC6A2P23975 617 aa9.53□□□□□ -0.88
SF3A1-203ENST00000444440 CRYBA2P53672 197 aa9.53□□□□□ -0.88
SF3A1-203ENST00000444440 CDH11P55287 796 aa9.53□□□□□ -0.88
SF3A1-203ENST00000444440 PCBP3P57721 371 aaKnown RBP9.53□□□□□ -0.88
SF3A1-203ENST00000444440 LTBQ06643 244 aa9.53□□□□□ -0.88
SF3A1-203ENST00000444440 NFYCQ13952 458 aa9.53□□□□□ -0.88
SF3A1-203ENST00000444440 CYLC2Q14093 348 aaPredicted RBP9.53□□□□□ -0.88
SF3A1-203ENST00000444440 MMEL1Q495T6 779 aa9.53□□□□□ -0.88
SF3A1-203ENST00000444440 CREB3L2Q70SY1 520 aa9.53□□□□□ -0.88
SF3A1-203ENST00000444440 AAED1Q7RTV5 226 aa9.53□□□□□ -0.88
SF3A1-203ENST00000444440 DHDDSQ86SQ9 333 aa9.53□□□□□ -0.88
SF3A1-203ENST00000444440 BIVMQ86UB2 503 aa9.53□□□□□ -0.88
SF3A1-203ENST00000444440 SMYD1Q8NB12 490 aa9.53□□□□□ -0.88
SF3A1-203ENST00000444440 BHLHE22Q8NFJ8 381 aaPredicted RBP9.53□□□□□ -0.88
SF3A1-203ENST00000444440 GPR32P1Q8NGA4 272 aa9.53□□□□□ -0.88
SF3A1-203ENST00000444440 OR4D11Q8NGI4 311 aa9.53□□□□□ -0.88
SF3A1-203ENST00000444440 STK35Q8TDR2 534 aa9.53□□□□□ -0.88
SF3A1-203ENST00000444440 SMAP2Q8WU79 429 aaPredicted RBP9.53□□□□□ -0.88
SF3A1-203ENST00000444440 SLC25A36Q96CQ1 311 aa9.53□□□□□ -0.88
SF3A1-203ENST00000444440 MUCL1Q96DR8 90 aa9.53□□□□□ -0.88
SF3A1-203ENST00000444440 ANKRD27Q96NW4 1050 aa9.53□□□□□ -0.88
SF3A1-203ENST00000444440 ZNF607Q96SK3 696 aa9.53□□□□□ -0.88
SF3A1-203ENST00000444440 SH3GL1Q99961 368 aa9.53□□□□□ -0.88
SF3A1-203ENST00000444440 TRAF4Q9BUZ4 470 aaPredicted RBP9.53□□□□□ -0.88
SF3A1-203ENST00000444440 SF3B5Q9BWJ5 86 aaKnown RBP9.53□□□□□ -0.88
SF3A1-203ENST00000444440 SLCO5A1Q9H2Y9 848 aa9.53□□□□□ -0.88
SF3A1-203ENST00000444440 NELFAQ9H3P2 528 aa9.53□□□□□ -0.88
SF3A1-203ENST00000444440 SLC17A5Q9NRA2 495 aa9.53□□□□□ -0.88
SF3A1-203ENST00000444440 GDF2Q9UK05 429 aaPredicted RBP9.53□□□□□ -0.88
SF3A1-203ENST00000444440 USP22Q9UPT9 525 aa9.53□□□□□ -0.88
SF3A1-203ENST00000444440 ABCA2Q9BZC7 2435 aa9.53□□□□□ -0.88
SF3A1-203ENST00000444440 SVEP1Q4LDE5 3571 aa9.53□□□□□ -0.88
SF3A1-203ENST00000444440 CSPG4Q6UVK1 2322 aa9.53□□□□□ -0.88
SF3A1-203ENST00000444440 ELOA3DA6NLF2 546 aaPredicted RBP9.52□□□□□ -0.89
SF3A1-203ENST00000444440 BBIP1A8MTZ0 92 aa9.52□□□□□ -0.89
SF3A1-203ENST00000444440 LRRN3E7EW58 273 aa9.52□□□□□ -0.89
SF3A1-203ENST00000444440 M0R082 166 aa9.52□□□□□ -0.89
SF3A1-203ENST00000444440 M0R3H8 397 aa9.52□□□□□ -0.89
SF3A1-203ENST00000444440 SLC22A2O15244 555 aa9.52□□□□□ -0.89
SF3A1-203ENST00000444440 CCDC22O60826 627 aa9.52□□□□□ -0.89
SF3A1-203ENST00000444440 UPK3AO75631 287 aa9.52□□□□□ -0.89
SF3A1-203ENST00000444440 SERPINB7O75635 380 aa9.52□□□□□ -0.89
SF3A1-203ENST00000444440 ZNF432O94892 652 aa9.52□□□□□ -0.89
SF3A1-203ENST00000444440 MFN2O95140 757 aa9.52□□□□□ -0.89
SF3A1-203ENST00000444440 IGHV4-39P01824 125 aa9.52□□□□□ -0.89
SF3A1-203ENST00000444440 THY1P04216 161 aa9.52□□□□□ -0.89
SF3A1-203ENST00000444440 CDH2P19022 906 aaPredicted RBP9.52□□□□□ -0.89
SF3A1-203ENST00000444440 CD40P25942 277 aa9.52□□□□□ -0.89
SF3A1-203ENST00000444440 GZMMP51124 257 aa9.52□□□□□ -0.89
SF3A1-203ENST00000444440 ATP5J2P56134 94 aa9.52□□□□□ -0.89
SF3A1-203ENST00000444440 RPS4XP62701 263 aaKnown RBP9.52□□□□□ -0.89
SF3A1-203ENST00000444440 KRTAP1-1Q07627 177 aa9.52□□□□□ -0.89
SF3A1-203ENST00000444440 KLF10Q13118 480 aa9.52□□□□□ -0.89
SF3A1-203ENST00000444440 NPTX1Q15818 432 aa9.52□□□□□ -0.89
SF3A1-203ENST00000444440 DUSP7Q16829 419 aa9.52□□□□□ -0.89
SF3A1-203ENST00000444440 ELOA3BQ3SY89 546 aa9.52□□□□□ -0.89
SF3A1-203ENST00000444440 HIKESHIQ53FT3 197 aa9.52□□□□□ -0.89
SF3A1-203ENST00000444440 C11orf71Q6IPW1 123 aa9.52□□□□□ -0.89
SF3A1-203ENST00000444440 CLEC9AQ6UXN8 241 aa9.52□□□□□ -0.89
SF3A1-203ENST00000444440 NET1Q7Z628 596 aaPredicted RBP9.52□□□□□ -0.89
SF3A1-203ENST00000444440 P2RY8Q86VZ1 359 aa9.52□□□□□ -0.89
SF3A1-203ENST00000444440 RBM45Q8IUH3 476 aaKnown RBP9.52□□□□□ -0.89
SF3A1-203ENST00000444440 SLC30A8Q8IWU4 369 aa9.52□□□□□ -0.89
SF3A1-203ENST00000444440 PIAS4Q8N2W9 510 aaPredicted RBP9.52□□□□□ -0.89
SF3A1-203ENST00000444440 LSMEM1Q8N8F7 131 aa9.52□□□□□ -0.89
SF3A1-203ENST00000444440 PCYOX1LQ8NBM8 494 aa9.52□□□□□ -0.89
SF3A1-203ENST00000444440 MAPK1IP1LQ8NDC0 245 aa9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms