RNA–Protein interactions for RNA: ENST00000443711.2

USP40-206, Transcript of ubiquitin specific peptidase 40, humanhuman

TSL 2 BASIC

Gene USP40, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP40-206ENST00000443711 LRRC17Q8N6Y2 441 aa14.12□□□□□ -0.15
USP40-206ENST00000443711 TMEM99Q8N816 258 aa14.12□□□□□ -0.15
USP40-206ENST00000443711 SCAIQ8N9R8 606 aa14.12□□□□□ -0.15
USP40-206ENST00000443711 ICA1LQ8NDH6 482 aa14.12□□□□□ -0.15
USP40-206ENST00000443711 OR9Q2Q8NGE9 314 aa14.12□□□□□ -0.15
USP40-206ENST00000443711 OR5J2Q8NH18 312 aa14.12□□□□□ -0.15
USP40-206ENST00000443711 ROBO4Q8WZ75 1007 aa14.12□□□□□ -0.15
USP40-206ENST00000443711 WNT2BQ93097 391 aa14.12□□□□□ -0.15
USP40-206ENST00000443711 SDCCAG3Q96C92 435 aa14.12□□□□□ -0.15
USP40-206ENST00000443711 PSD2Q9BQI7 771 aa14.12□□□□□ -0.15
USP40-206ENST00000443711 CHST11Q9NPF2 352 aa14.12□□□□□ -0.15
USP40-206ENST00000443711 MRPL39Q9NYK5 338 aaKnown RBP14.12□□□□□ -0.15
USP40-206ENST00000443711 OSGIN2Q9Y236 505 aa14.12□□□□□ -0.15
USP40-206ENST00000443711 B3GALT5Q9Y2C3 310 aa14.12□□□□□ -0.15
USP40-206ENST00000443711 TRGV8A0A0C4DH27 118 aa14.11□□□□□ -0.15
USP40-206ENST00000443711 UNC119BA6NIH7 251 aa14.11□□□□□ -0.15
USP40-206ENST00000443711 AQP7P3A6NL99 342 aa14.11□□□□□ -0.15
USP40-206ENST00000443711 M0R082 166 aa14.11□□□□□ -0.15
USP40-206ENST00000443711 SMAD9O15198 467 aaKnown RBP14.11□□□□□ -0.15
USP40-206ENST00000443711 GASTP01350 101 aa14.11□□□□□ -0.15
USP40-206ENST00000443711 ASAH2BP0C7U1 165 aa14.11□□□□□ -0.15
USP40-206ENST00000443711 ANXA8P13928 327 aa14.11□□□□□ -0.15
USP40-206ENST00000443711 PRKACGP22612 351 aa14.11□□□□□ -0.15
USP40-206ENST00000443711 H3F3AP84243 136 aa14.11□□□□□ -0.15
USP40-206ENST00000443711 MRPL49Q13405 166 aaKnown RBP14.11□□□□□ -0.15
USP40-206ENST00000443711 ANKDD1AQ495B1 522 aa14.11□□□□□ -0.15
USP40-206ENST00000443711 TMEM225Q6GV28 225 aa14.11□□□□□ -0.15
USP40-206ENST00000443711 B3GNT6Q6ZMB0 384 aa14.11□□□□□ -0.15
USP40-206ENST00000443711 FCRLAQ7L513 359 aa14.11□□□□□ -0.15
USP40-206ENST00000443711 NANOGNBQ7Z5D8 188 aa14.11□□□□□ -0.15
USP40-206ENST00000443711 OAFQ86UD1 273 aa14.11□□□□□ -0.15
USP40-206ENST00000443711 STK32CQ86UX6 486 aa14.11□□□□□ -0.15
USP40-206ENST00000443711 MEX3DQ86XN8 651 aaKnown RBP14.11□□□□□ -0.15
USP40-206ENST00000443711 SLC43A2Q8N370 569 aa14.11□□□□□ -0.15
USP40-206ENST00000443711 AQP11Q8NBQ7 271 aa14.11□□□□□ -0.15
USP40-206ENST00000443711 ADPRHL1Q8NDY3 354 aa14.11□□□□□ -0.15
USP40-206ENST00000443711 ZNF417Q8TAU3 575 aa14.11□□□□□ -0.15
USP40-206ENST00000443711 FNDC9Q8TBE3 224 aa14.11□□□□□ -0.15
USP40-206ENST00000443711 PHF3Q92576 2039 aaKnown RBP14.11□□□□□ -0.15
USP40-206ENST00000443711 ZNF587Q96SQ5 575 aaPredicted RBP14.11□□□□□ -0.15
USP40-206ENST00000443711 FEVQ99581 238 aa14.11□□□□□ -0.15
USP40-206ENST00000443711 DGCR6LQ9BY27 220 aa14.11□□□□□ -0.15
USP40-206ENST00000443711 STX18Q9P2W9 335 aaKnown RBP14.11□□□□□ -0.15
USP40-206ENST00000443711 CLCF1Q9UBD9 225 aa14.11□□□□□ -0.15
USP40-206ENST00000443711 TINAGQ9UJW2 476 aa14.11□□□□□ -0.15
USP40-206ENST00000443711 RASD1Q9Y272 281 aa14.11□□□□□ -0.15
USP40-206ENST00000443711 MED12LQ86YW9 2145 aa14.11□□□□□ -0.15
USP40-206ENST00000443711 IGHV3-15A0A0B4J1V0 119 aa14.1□□□□□ -0.15
USP40-206ENST00000443711 SAC3D1A6NKF1 404 aa14.1□□□□□ -0.15
USP40-206ENST00000443711 KLF4O43474 513 aa14.1□□□□□ -0.15
USP40-206ENST00000443711 MGRN1O60291 552 aa14.1□□□□□ -0.15
USP40-206ENST00000443711 VAMP5O95183 116 aa14.1□□□□□ -0.15
USP40-206ENST00000443711 OR6A2O95222 327 aa14.1□□□□□ -0.15
USP40-206ENST00000443711 ADAP00813 363 aa14.1□□□□□ -0.15
USP40-206ENST00000443711 STSP08842 583 aa14.1□□□□□ -0.15
USP40-206ENST00000443711 POU2F1P14859 743 aa14.1□□□□□ -0.15
USP40-206ENST00000443711 GSTM3P21266 225 aa14.1□□□□□ -0.15
USP40-206ENST00000443711 FPR3P25089 353 aa14.1□□□□□ -0.15
USP40-206ENST00000443711 CA7P43166 264 aa14.1□□□□□ -0.15
USP40-206ENST00000443711 GSSP48637 474 aa14.1□□□□□ -0.15
USP40-206ENST00000443711 TSPAN31Q12999 210 aa14.1□□□□□ -0.15
USP40-206ENST00000443711 RIPK1Q13546 671 aa14.1□□□□□ -0.15
USP40-206ENST00000443711 RNPS1Q15287 305 aaKnown RBP14.1□□□□□ -0.15
USP40-206ENST00000443711 ZBED5Q49AG3 693 aa14.1□□□□□ -0.15
USP40-206ENST00000443711 RTL6Q6ICC9 239 aa14.1□□□□□ -0.15
USP40-206ENST00000443711 RPTNQ6XPR3 784 aa14.1□□□□□ -0.15
USP40-206ENST00000443711 CCDC103Q8IW40 242 aa14.1□□□□□ -0.15
USP40-206ENST00000443711 MCEMP1Q8IX19 187 aa14.1□□□□□ -0.15
USP40-206ENST00000443711 HS3ST5Q8IZT8 346 aa14.1□□□□□ -0.15
USP40-206ENST00000443711 DOCK7Q96N67 2140 aa14.1□□□□□ -0.15
USP40-206ENST00000443711 TM9SF2Q99805 663 aa14.1□□□□□ -0.15
USP40-206ENST00000443711 OSBPL10Q9BXB5 764 aa14.1□□□□□ -0.15
USP40-206ENST00000443711 ZNF556Q9HAH1 456 aa14.1□□□□□ -0.15
USP40-206ENST00000443711 SH3BGRL2Q9UJC5 107 aa14.1□□□□□ -0.15
USP40-206ENST00000443711 OAZ3Q9UMX2 235 aa14.1□□□□□ -0.15
USP40-206ENST00000443711 FAM215AQ9Y5M1 114 aa14.1□□□□□ -0.15
USP40-206ENST00000443711 MAGED1Q9Y5V3 778 aaPredicted RBP14.1□□□□□ -0.15
USP40-206ENST00000443711 E9PLN8 166 aa14.09□□□□□ -0.15
USP40-206ENST00000443711 BLOC1S5-TXNDC5H3BN57 136 aa14.09□□□□□ -0.15
USP40-206ENST00000443711 PLPP3O14495 311 aa14.09□□□□□ -0.15
USP40-206ENST00000443711 CDC42EP2O14613 210 aa14.09□□□□□ -0.15
USP40-206ENST00000443711 CYTIPO60759 359 aa14.09□□□□□ -0.15
USP40-206ENST00000443711 AQP8O94778 261 aa14.09□□□□□ -0.15
USP40-206ENST00000443711 TGM6O95932 706 aa14.09□□□□□ -0.15
USP40-206ENST00000443711 ADORA3P0DMS8 318 aa14.09□□□□□ -0.15
USP40-206ENST00000443711 KLK2P20151 261 aa14.09□□□□□ -0.15
USP40-206ENST00000443711 GNLYP22749 145 aa14.09□□□□□ -0.15
USP40-206ENST00000443711 P2RY4P51582 365 aa14.09□□□□□ -0.15
USP40-206ENST00000443711 RASGEF1BQ0VAM2 473 aa14.09□□□□□ -0.15
USP40-206ENST00000443711 ZP4Q12836 540 aa14.09□□□□□ -0.15
USP40-206ENST00000443711 COX10Q12887 443 aa14.09□□□□□ -0.15
USP40-206ENST00000443711 TAF11Q15544 211 aa14.09□□□□□ -0.15
USP40-206ENST00000443711 ABLIM2Q6H8Q1 611 aa14.09□□□□□ -0.15
USP40-206ENST00000443711 TMEM211Q6ICI0 200 aa14.09□□□□□ -0.15
USP40-206ENST00000443711 OR2A2Q6IF42 318 aa14.09□□□□□ -0.15
USP40-206ENST00000443711 PLXDC2Q6UX71 529 aa14.09□□□□□ -0.15
USP40-206ENST00000443711 CD300LDQ6UXZ3 194 aa14.09□□□□□ -0.15
USP40-206ENST00000443711 C3P1Q6ZMU1 363 aa14.09□□□□□ -0.15
USP40-206ENST00000443711 ATG16L2Q8NAA4 619 aa14.09□□□□□ -0.15
USP40-206ENST00000443711 OR13C2Q8NGS9 318 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms