RNA–Protein interactions for RNA: ENST00000441602.5

VPS50-205, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,474 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-205ENST00000441602 FGF11Q92914 225 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 C1GALT1C1Q96EU7 318 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 CEP19Q96LK0 163 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 TEAD3Q99594 435 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 ALG8Q9BVK2 526 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 KCNN2Q9H2S1 579 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 CDCP1Q9H5V8 836 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 PALMDQ9NP74 551 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 KLHL1Q9NR64 748 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 ASB6Q9NWX5 421 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 NDUFB11Q9NX14 153 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 ERVK13-1Q9NX77 482 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 DKKL1Q9UK85 242 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 LSM2Q9Y333 95 aaKnown RBP5.47□□□□□ -1.53
VPS50-205ENST00000441602 PEX16Q9Y5Y5 336 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 TMEM14AQ9Y6G1 99 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 SEC16AO15027 2179 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 TMEM72A0PK05 275 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 NPIPA5E9PKD4 350 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 GLCEO94923 617 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 SNX4O95219 450 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 SERPINA3P01011 423 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 SBK2P0C263 348 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 ASAH2BP0C7U1 165 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 PRKCAP17252 672 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 RPS5P46782 204 aaKnown RBP5.47□□□□□ -1.53
VPS50-205ENST00000441602 ETV1P50549 477 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 DLX5P56178 289 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 MLF1P58340 268 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 RPL18Q07020 188 aaKnown RBP5.47□□□□□ -1.53
VPS50-205ENST00000441602 ACSM1Q08AH1 577 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 SELENBP1Q13228 472 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 PLEKHG7Q6ZR37 379 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 SLC35F2Q8IXU6 374 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 CACTIN-AS1Q8N1I8 211 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 OR4F15Q8NGB8 312 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 RNF138Q8WVD3 245 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 ZBTB8AQ96BR9 441 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 KCTD7Q96MP8 289 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 TOR4AQ9NXH8 423 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 ALKBH4Q9NXW9 302 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 MRPL39Q9NYK5 338 aaKnown RBP5.47□□□□□ -1.53
VPS50-205ENST00000441602 TAS2R16Q9NYV7 291 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 MED11Q9P086 117 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 CLEC2DQ9UHP7 191 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 NPIPA1Q9UND3 350 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 GJE1A6NN92 205 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 CENPBD1B2RD01 187 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 CLDN25C9JDP6 229 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 CDK2AP1O14519 115 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 KLF7O75840 302 aaPredicted RBP5.47□□□□□ -1.53
VPS50-205ENST00000441602 TACSTD2P09758 323 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 HIST1H1CP16403 213 aaKnown RBP5.47□□□□□ -1.53
VPS50-205ENST00000441602 F8A1P23610 371 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 ADH6P28332 368 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 GRPRP30550 384 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 SOX3P41225 446 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 FXYD6P3P58550 94 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 NCS1P62166 190 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 GALEQ14376 348 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 ZNF404Q494X3 552 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 SLC25A53Q5H9E4 307 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 C3orf33Q6P1S2 294 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 C16orf87Q6PH81 154 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 ZNF322Q6U7Q0 402 aaPredicted RBP5.47□□□□□ -1.53
VPS50-205ENST00000441602 DHRS13Q6UX07 377 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 IL20RBQ6UXL0 311 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 GLRX5Q86SX6 157 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 LHFPL3Q86UP9 236 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 IGFN1Q86VF2 1251 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 PLCZ1Q86YW0 608 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 SYS1Q8N2H4 156 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 CYB561A3Q8NBI2 242 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 BBS1Q8NFJ9 593 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 OR10G3Q8NGC4 313 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 OR6K6Q8NGW6 343 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 SNX33Q8WV41 574 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 THAP4Q8WY91 577 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 AP3S1Q92572 193 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 TAAR8Q969N4 342 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 KTI12Q96EK9 354 aaPredicted RBP5.47□□□□□ -1.53
VPS50-205ENST00000441602 MED20Q9H944 212 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 SLC24A3Q9HC58 644 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 BABAM2Q9NXR7 383 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 FBXL4Q9UKA2 621 aa5.47□□□□□ -1.53
VPS50-205ENST00000441602 CCDC182A6NF36 153 aa5.46□□□□□ -1.53
VPS50-205ENST00000441602 TNFRSF10AO00220 468 aa5.46□□□□□ -1.53
VPS50-205ENST00000441602 APOL3O95236 402 aa5.46□□□□□ -1.53
VPS50-205ENST00000441602 LIMS3P0CW19 117 aa5.46□□□□□ -1.53
VPS50-205ENST00000441602 LIMS4P0CW20 117 aa5.46□□□□□ -1.53
VPS50-205ENST00000441602 GALP22466 123 aa5.46□□□□□ -1.53
VPS50-205ENST00000441602 AHCYP23526 432 aa5.46□□□□□ -1.53
VPS50-205ENST00000441602 CRABP1P29762 137 aa5.46□□□□□ -1.53
VPS50-205ENST00000441602 GABRA5P31644 462 aa5.46□□□□□ -1.53
VPS50-205ENST00000441602 UQCRC1P31930 480 aa5.46□□□□□ -1.53
VPS50-205ENST00000441602 DLSTP36957 453 aa5.46□□□□□ -1.53
VPS50-205ENST00000441602 RPL27P61353 136 aaKnown RBP5.46□□□□□ -1.53
VPS50-205ENST00000441602 FOXF1Q12946 379 aa5.46□□□□□ -1.53
VPS50-205ENST00000441602 CHAF1BQ13112 559 aa5.46□□□□□ -1.53
VPS50-205ENST00000441602 AQP6Q13520 282 aa5.46□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms