RNA–Protein interactions for RNA: ENST00000440048.1

VARS-217, Transcript of valyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene VARS, Length 804 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS-217ENST00000440048 PARPBPQ9NWS1 579 aa20.88■□□□□ 0.93
VARS-217ENST00000440048 PLEKHA6Q9Y2H5 1048 aa20.88■□□□□ 0.93
VARS-217ENST00000440048 TRAV36DV7A0A075B6V5 113 aa20.87■□□□□ 0.93
VARS-217ENST00000440048 OR2T1O43869 369 aa20.87■□□□□ 0.93
VARS-217ENST00000440048 FZD7O75084 574 aa20.87■□□□□ 0.93
VARS-217ENST00000440048 VAMP5O95183 116 aa20.87■□□□□ 0.93
VARS-217ENST00000440048 TAB1Q15750 504 aa20.87■□□□□ 0.93
VARS-217ENST00000440048 BEX5Q5H9J7 111 aa20.87■□□□□ 0.93
VARS-217ENST00000440048 ENTPD8Q5MY95 495 aa20.87■□□□□ 0.93
VARS-217ENST00000440048 SWT1Q5T5J6 900 aaKnown RBP20.87■□□□□ 0.93
VARS-217ENST00000440048 FAM69AQ5T7M9 428 aa20.87■□□□□ 0.93
VARS-217ENST00000440048 PAMR1Q6UXH9 720 aa20.87■□□□□ 0.93
VARS-217ENST00000440048 SLC15A3Q8IY34 581 aa20.87■□□□□ 0.93
VARS-217ENST00000440048 MICU2Q8IYU8 434 aa20.87■□□□□ 0.93
VARS-217ENST00000440048 ZNF433Q8N7K0 673 aaPredicted RBP20.87■□□□□ 0.93
VARS-217ENST00000440048 ZNF385AQ96PM9 386 aaKnown RBP20.87■□□□□ 0.93
VARS-217ENST00000440048 USB1Q9BQ65 265 aaKnown RBP20.87■□□□□ 0.93
VARS-217ENST00000440048 RASD1Q9Y272 281 aa20.87■□□□□ 0.93
VARS-217ENST00000440048 AP3M1Q9Y2T2 418 aa20.87■□□□□ 0.93
VARS-217ENST00000440048 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP20.86■□□□□ 0.93
VARS-217ENST00000440048 CPSF4LA6NMK7 179 aaKnown RBP20.86■□□□□ 0.93
VARS-217ENST00000440048 GTF2E2P29084 291 aaKnown RBP20.86■□□□□ 0.93
VARS-217ENST00000440048 ALKBH2Q6NS38 261 aa20.86■□□□□ 0.93
VARS-217ENST00000440048 C8orf82Q6P1X6 216 aaPredicted RBP20.86■□□□□ 0.93
VARS-217ENST00000440048 HSD17B8Q92506 261 aa20.86■□□□□ 0.93
VARS-217ENST00000440048 HOPXQ9BPY8 73 aaPredicted RBP20.86■□□□□ 0.93
VARS-217ENST00000440048 CCM2LQ9NUG4 571 aaPredicted RBP20.86■□□□□ 0.93
VARS-217ENST00000440048 ASB6Q9NWX5 421 aa20.86■□□□□ 0.93
VARS-217ENST00000440048 GMPR2Q9P2T1 348 aaKnown RBP20.86■□□□□ 0.93
VARS-217ENST00000440048 SEC14L4Q9UDX3 406 aa20.86■□□□□ 0.93
VARS-217ENST00000440048 MALT1Q9UDY8 824 aa20.86■□□□□ 0.93
VARS-217ENST00000440048 MTORP42345 2549 aa20.86■□□□□ 0.93
VARS-217ENST00000440048 ELOVL7A1L3X0 281 aa20.85■□□□□ 0.93
VARS-217ENST00000440048 LYPD3O95274 346 aa20.85■□□□□ 0.93
VARS-217ENST00000440048 PTNP21246 168 aa20.85■□□□□ 0.93
VARS-217ENST00000440048 DNASE1P24855 282 aa20.85■□□□□ 0.93
VARS-217ENST00000440048 FAPQ12884 760 aa20.85■□□□□ 0.93
VARS-217ENST00000440048 LINC00114Q6XXX2 140 aa20.85■□□□□ 0.93
VARS-217ENST00000440048 HACD2Q6Y1H2 254 aa20.85■□□□□ 0.93
VARS-217ENST00000440048 CREB3L2Q70SY1 520 aa20.85■□□□□ 0.93
VARS-217ENST00000440048 AAED1Q7RTV5 226 aa20.85■□□□□ 0.93
VARS-217ENST00000440048 TSPYL5Q86VY4 417 aaPredicted RBP20.85■□□□□ 0.93
VARS-217ENST00000440048 KDM8Q8N371 416 aa20.85■□□□□ 0.93
VARS-217ENST00000440048 PROX1Q92786 737 aa20.85■□□□□ 0.93
VARS-217ENST00000440048 CMTM5Q96DZ9 223 aa20.85■□□□□ 0.93
VARS-217ENST00000440048 EPYCQ99645 322 aa20.85■□□□□ 0.93
VARS-217ENST00000440048 TMEM43Q9BTV4 400 aa20.85■□□□□ 0.93
VARS-217ENST00000440048 PCDHAC1Q9H158 963 aa20.85■□□□□ 0.93
VARS-217ENST00000440048 SLC7A10Q9NS82 523 aa20.85■□□□□ 0.93
VARS-217ENST00000440048 BAG5Q9UL15 447 aa20.85■□□□□ 0.93
VARS-217ENST00000440048 M0R082 166 aa20.84■□□□□ 0.93
VARS-217ENST00000440048 CHP2O43745 196 aa20.84■□□□□ 0.93
VARS-217ENST00000440048 IFNA14P01570 189 aa20.84■□□□□ 0.93
VARS-217ENST00000440048 RAF1P04049 648 aa20.84■□□□□ 0.93
VARS-217ENST00000440048 THY1P04216 161 aa20.84■□□□□ 0.93
VARS-217ENST00000440048 GGT1P19440 569 aa20.84■□□□□ 0.93
VARS-217ENST00000440048 TNFRSF1BP20333 461 aa20.84■□□□□ 0.93
VARS-217ENST00000440048 CBLP22681 906 aa20.84■□□□□ 0.93
VARS-217ENST00000440048 GRPRP30550 384 aa20.84■□□□□ 0.93
VARS-217ENST00000440048 KDELR2P33947 212 aa20.84■□□□□ 0.93
VARS-217ENST00000440048 NUDT2P50583 147 aa20.84■□□□□ 0.93
VARS-217ENST00000440048 SLC7A2P52569 658 aa20.84■□□□□ 0.93
VARS-217ENST00000440048 FOXG1P55316 489 aaPredicted RBP20.84■□□□□ 0.93
VARS-217ENST00000440048 LIPEQ05469 1076 aa20.84■□□□□ 0.93
VARS-217ENST00000440048 LTBQ06643 244 aa20.84■□□□□ 0.93
VARS-217ENST00000440048 STK11Q15831 433 aa20.84■□□□□ 0.93
VARS-217ENST00000440048 TSPO2Q5TGU0 170 aa20.84■□□□□ 0.93
VARS-217ENST00000440048 CARM1Q86X55 608 aa20.84■□□□□ 0.93
VARS-217ENST00000440048 EPHX4Q8IUS5 362 aa20.84■□□□□ 0.93
VARS-217ENST00000440048 OR6S1Q8NH40 331 aa20.84■□□□□ 0.93
VARS-217ENST00000440048 ZNF417Q8TAU3 575 aa20.84■□□□□ 0.93
VARS-217ENST00000440048 ADAMTS16Q8TE57 1224 aa20.84■□□□□ 0.93
VARS-217ENST00000440048 PLPPR2Q96GM1 343 aa20.84■□□□□ 0.93
VARS-217ENST00000440048 ZNF587Q96SQ5 575 aaPredicted RBP20.84■□□□□ 0.93
VARS-217ENST00000440048 UPB1Q9UBR1 384 aa20.84■□□□□ 0.93
VARS-217ENST00000440048 SH3GLB1Q9Y371 365 aa20.84■□□□□ 0.93
VARS-217ENST00000440048 TRAPPC13A5PLN9 417 aa20.83■□□□□ 0.93
VARS-217ENST00000440048 PDLIM1O00151 329 aa20.83■□□□□ 0.93
VARS-217ENST00000440048 NME4O00746 187 aa20.83■□□□□ 0.93
VARS-217ENST00000440048 ATE1O95260 518 aa20.83■□□□□ 0.93
VARS-217ENST00000440048 BGLAPP02818 100 aa20.83■□□□□ 0.93
VARS-217ENST00000440048 PRDX6P30041 224 aa20.83■□□□□ 0.93
VARS-217ENST00000440048 ART1P52961 327 aa20.83■□□□□ 0.93
VARS-217ENST00000440048 LRRC23Q53EV4 343 aaPredicted RBP20.83■□□□□ 0.93
VARS-217ENST00000440048 CYBRD1Q53TN4 286 aa20.83■□□□□ 0.93
VARS-217ENST00000440048 WDR88Q6ZMY6 472 aa20.83■□□□□ 0.93
VARS-217ENST00000440048 SLCO5A1Q9H2Y9 848 aa20.83■□□□□ 0.93
VARS-217ENST00000440048 TAS2R16Q9NYV7 291 aa20.83■□□□□ 0.93
VARS-217ENST00000440048 B3GALT5Q9Y2C3 310 aa20.83■□□□□ 0.93
VARS-217ENST00000440048 SETD2Q9BYW2 2564 aaPredicted RBP20.83■□□□□ 0.92
VARS-217ENST00000440048 CADP27708 2225 aa20.82■□□□□ 0.92
VARS-217ENST00000440048 CIB4A0PJX0 185 aa20.82■□□□□ 0.92
VARS-217ENST00000440048 RAD51DO75771 328 aa20.82■□□□□ 0.92
VARS-217ENST00000440048 ITGA5P08648 1049 aa20.82■□□□□ 0.92
VARS-217ENST00000440048 NR1H2P55055 460 aa20.82■□□□□ 0.92
VARS-217ENST00000440048 KEAP1Q14145 624 aa20.82■□□□□ 0.92
VARS-217ENST00000440048 MFSD13AQ14CX5 517 aa20.82■□□□□ 0.92
VARS-217ENST00000440048 TIMM23BQ5SRD1 257 aa20.82■□□□□ 0.92
VARS-217ENST00000440048 SEZ6L2Q6UXD5 910 aa20.82■□□□□ 0.92
VARS-217ENST00000440048 H1FNTQ75WM6 255 aaPredicted RBP20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms