RNA–Protein interactions for RNA: ENST00000439475.1

MCF2L-216, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-216ENST00000439475 KTI12Q96EK9 354 aaPredicted RBP9.25□□□□□ -0.93
MCF2L-216ENST00000439475 MPP4Q96JB8 637 aa9.25□□□□□ -0.93
MCF2L-216ENST00000439475 ZNF583Q96ND8 569 aa9.25□□□□□ -0.93
MCF2L-216ENST00000439475 OXGR1Q96P68 337 aa9.25□□□□□ -0.93
MCF2L-216ENST00000439475 TMEM43Q9BTV4 400 aa9.25□□□□□ -0.93
MCF2L-216ENST00000439475 PRR14Q9BWN1 585 aa9.25□□□□□ -0.93
MCF2L-216ENST00000439475 ASPNQ9BXN1 380 aa9.25□□□□□ -0.93
MCF2L-216ENST00000439475 LIME1Q9H400 295 aa9.25□□□□□ -0.93
MCF2L-216ENST00000439475 SH3GLB1Q9Y371 365 aa9.25□□□□□ -0.93
MCF2L-216ENST00000439475 UNC79Q9P2D8 2635 aa9.25□□□□□ -0.93
MCF2L-216ENST00000439475 ABCA4P78363 2273 aa9.24□□□□□ -0.93
MCF2L-216ENST00000439475 TRAPPC13A5PLN9 417 aa9.24□□□□□ -0.93
MCF2L-216ENST00000439475 OR5H1A6NKK0 313 aa9.24□□□□□ -0.93
MCF2L-216ENST00000439475 CPSF4LA6NMK7 179 aaKnown RBP9.24□□□□□ -0.93
MCF2L-216ENST00000439475 FTCDNL1E5RQL4 147 aa9.24□□□□□ -0.93
MCF2L-216ENST00000439475 FXYD1O00168 92 aa9.24□□□□□ -0.93
MCF2L-216ENST00000439475 DYNC1I1O14576 645 aa9.24□□□□□ -0.93
MCF2L-216ENST00000439475 GSTA4O15217 222 aa9.24□□□□□ -0.93
MCF2L-216ENST00000439475 SNX3O60493 162 aa9.24□□□□□ -0.93
MCF2L-216ENST00000439475 RAD51DO75771 328 aa9.24□□□□□ -0.93
MCF2L-216ENST00000439475 OR6A2O95222 327 aa9.24□□□□□ -0.93
MCF2L-216ENST00000439475 CD3EP07766 207 aa9.24□□□□□ -0.93
MCF2L-216ENST00000439475 MPGP29372 298 aa9.24□□□□□ -0.93
MCF2L-216ENST00000439475 PRDX6P30041 224 aa9.24□□□□□ -0.93
MCF2L-216ENST00000439475 KDELR2P33947 212 aa9.24□□□□□ -0.93
MCF2L-216ENST00000439475 PPA1Q15181 289 aa9.24□□□□□ -0.93
MCF2L-216ENST00000439475 DEFB113Q30KQ7 82 aa9.24□□□□□ -0.93
MCF2L-216ENST00000439475 TSPO2Q5TGU0 170 aa9.24□□□□□ -0.93
MCF2L-216ENST00000439475 NIPAL3Q6P499 406 aa9.24□□□□□ -0.93
MCF2L-216ENST00000439475 KLHL17Q6TDP4 642 aa9.24□□□□□ -0.93
MCF2L-216ENST00000439475 HACD2Q6Y1H2 254 aa9.24□□□□□ -0.93
MCF2L-216ENST00000439475 ZNF704Q6ZNC4 412 aaPredicted RBP9.24□□□□□ -0.93
MCF2L-216ENST00000439475 C22orf34Q6ZV56 151 aa9.24□□□□□ -0.93
MCF2L-216ENST00000439475 MICU2Q8IYU8 434 aa9.24□□□□□ -0.93
MCF2L-216ENST00000439475 DEPDC4Q8N2C3 294 aa9.24□□□□□ -0.93
MCF2L-216ENST00000439475 GPR32P1Q8NGA4 272 aa9.24□□□□□ -0.93
MCF2L-216ENST00000439475 ADAMTS16Q8TE57 1224 aa9.24□□□□□ -0.93
MCF2L-216ENST00000439475 TAAR8Q969N4 342 aa9.24□□□□□ -0.93
MCF2L-216ENST00000439475 TAMM41Q96BW9 452 aa9.24□□□□□ -0.93
MCF2L-216ENST00000439475 MUS81Q96NY9 551 aa9.24□□□□□ -0.93
MCF2L-216ENST00000439475 ZNF385AQ96PM9 386 aaKnown RBP9.24□□□□□ -0.93
MCF2L-216ENST00000439475 PTDSS2Q9BVG9 487 aa9.24□□□□□ -0.93
MCF2L-216ENST00000439475 RSPO3Q9BXY4 272 aaPredicted RBP9.24□□□□□ -0.93
MCF2L-216ENST00000439475 POLR2J2Q9GZM3 115 aaKnown RBP9.24□□□□□ -0.93
MCF2L-216ENST00000439475 POLR2J3Q9H1A7 115 aaKnown RBP9.24□□□□□ -0.93
MCF2L-216ENST00000439475 SLCO5A1Q9H2Y9 848 aa9.24□□□□□ -0.93
MCF2L-216ENST00000439475 UBTD1Q9HAC8 227 aa9.24□□□□□ -0.93
MCF2L-216ENST00000439475 SLC7A10Q9NS82 523 aa9.24□□□□□ -0.93
MCF2L-216ENST00000439475 BEX4Q9NWD9 120 aaPredicted RBP9.24□□□□□ -0.93
MCF2L-216ENST00000439475 MALT1Q9UDY8 824 aa9.24□□□□□ -0.93
MCF2L-216ENST00000439475 MAGED1Q9Y5V3 778 aaPredicted RBP9.24□□□□□ -0.93
MCF2L-216ENST00000439475 UTP20O75691 2785 aaKnown RBP9.24□□□□□ -0.93
MCF2L-216ENST00000439475 LOC102725191A0A1B0GVB3 256 aa9.23□□□□□ -0.93
MCF2L-216ENST00000439475 M0R082 166 aa9.23□□□□□ -0.93
MCF2L-216ENST00000439475 SIAH2O43255 324 aa9.23□□□□□ -0.93
MCF2L-216ENST00000439475 TPST2O60704 377 aa9.23□□□□□ -0.93
MCF2L-216ENST00000439475 SLC43A1O75387 559 aa9.23□□□□□ -0.93
MCF2L-216ENST00000439475 GMNNO75496 209 aa9.23□□□□□ -0.93
MCF2L-216ENST00000439475 MT-ATP6P00846 226 aa9.23□□□□□ -0.93
MCF2L-216ENST00000439475 HIST1H2ABP04908 130 aa9.23□□□□□ -0.93
MCF2L-216ENST00000439475 CBLP22681 906 aa9.23□□□□□ -0.93
MCF2L-216ENST00000439475 GRPRP30550 384 aa9.23□□□□□ -0.93
MCF2L-216ENST00000439475 NUDT2P50583 147 aa9.23□□□□□ -0.93
MCF2L-216ENST00000439475 TAS2R41P59536 307 aa9.23□□□□□ -0.93
MCF2L-216ENST00000439475 SELENOWP63302 87 aa9.23□□□□□ -0.93
MCF2L-216ENST00000439475 PMS2P3Q13401 168 aa9.23□□□□□ -0.93
MCF2L-216ENST00000439475 NPTX1Q15818 432 aa9.23□□□□□ -0.93
MCF2L-216ENST00000439475 LRRC23Q53EV4 343 aaPredicted RBP9.23□□□□□ -0.93
MCF2L-216ENST00000439475 NCMAPQ5T1S8 102 aa9.23□□□□□ -0.93
MCF2L-216ENST00000439475 HMBOX1Q6NT76 420 aa9.23□□□□□ -0.93
MCF2L-216ENST00000439475 KLHL24Q6TFL4 600 aa9.23□□□□□ -0.93
MCF2L-216ENST00000439475 SPNS3Q6ZMD2 512 aa9.23□□□□□ -0.93
MCF2L-216ENST00000439475 HIST3H2AQ7L7L0 130 aa9.23□□□□□ -0.93
MCF2L-216ENST00000439475 COMTD1Q86VU5 262 aa9.23□□□□□ -0.93
MCF2L-216ENST00000439475 CARM1Q86X55 608 aa9.23□□□□□ -0.93
MCF2L-216ENST00000439475 EPHX4Q8IUS5 362 aa9.23□□□□□ -0.93
MCF2L-216ENST00000439475 UEVLDQ8IX04 471 aa9.23□□□□□ -0.93
MCF2L-216ENST00000439475 SLC15A3Q8IY34 581 aa9.23□□□□□ -0.93
MCF2L-216ENST00000439475 KDM8Q8N371 416 aa9.23□□□□□ -0.93
MCF2L-216ENST00000439475 C17orf78Q8N4C9 275 aa9.23□□□□□ -0.93
MCF2L-216ENST00000439475 SCAIQ8N9R8 606 aa9.23□□□□□ -0.93
MCF2L-216ENST00000439475 ADPRHL1Q8NDY3 354 aa9.23□□□□□ -0.93
MCF2L-216ENST00000439475 C1orf162Q8NEQ5 155 aaPredicted RBP9.23□□□□□ -0.93
MCF2L-216ENST00000439475 ZNF417Q8TAU3 575 aa9.23□□□□□ -0.93
MCF2L-216ENST00000439475 HIST1H2ACQ93077 130 aa9.23□□□□□ -0.93
MCF2L-216ENST00000439475 RADILQ96JH8 1075 aa9.23□□□□□ -0.93
MCF2L-216ENST00000439475 ALPK1Q96QP1 1244 aa9.23□□□□□ -0.93
MCF2L-216ENST00000439475 ZNF587Q96SQ5 575 aaPredicted RBP9.23□□□□□ -0.93
MCF2L-216ENST00000439475 PIP5K1AQ99755 562 aa9.23□□□□□ -0.93
MCF2L-216ENST00000439475 SLC19A3Q9BZV2 496 aa9.23□□□□□ -0.93
MCF2L-216ENST00000439475 MGAT4BQ9UQ53 548 aa9.23□□□□□ -0.93
MCF2L-216ENST00000439475 RCE1Q9Y256 329 aa9.23□□□□□ -0.93
MCF2L-216ENST00000439475 AMDHD2Q9Y303 409 aa9.23□□□□□ -0.93
MCF2L-216ENST00000439475 RNF115Q9Y4L5 304 aa9.23□□□□□ -0.93
MCF2L-216ENST00000439475 ANKHD1Q8IWZ3 2542 aaKnown RBP9.23□□□□□ -0.93
MCF2L-216ENST00000439475 IGKV1D-42A0A075B6H8 117 aa9.22□□□□□ -0.93
MCF2L-216ENST00000439475 ZNF726A6NNF4 738 aa9.22□□□□□ -0.93
MCF2L-216ENST00000439475 ZNF587BE7ETH6 402 aa9.22□□□□□ -0.93
MCF2L-216ENST00000439475 ARHGEF9O43307 516 aa9.22□□□□□ -0.93
MCF2L-216ENST00000439475 TMCC2O75069 709 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms