RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 LPCAT4Q643R3 524 aa11.37□□□□□ -0.59
SCLT1-202ENST00000439369 KLHL17Q6TDP4 642 aa11.37□□□□□ -0.59
SCLT1-202ENST00000439369 ZNF620Q6ZNG0 422 aa11.37□□□□□ -0.59
SCLT1-202ENST00000439369 CHMP1BQ7LBR1 199 aa11.37□□□□□ -0.59
SCLT1-202ENST00000439369 CHERPQ8IWX8 916 aaKnown RBP11.37□□□□□ -0.59
SCLT1-202ENST00000439369 UBQLNLQ8IYU4 475 aa11.37□□□□□ -0.59
SCLT1-202ENST00000439369 GTPBP3Q969Y2 492 aaKnown RBP11.37□□□□□ -0.59
SCLT1-202ENST00000439369 SLC25A36Q96CQ1 311 aa11.37□□□□□ -0.59
SCLT1-202ENST00000439369 GPA33Q99795 319 aa11.37□□□□□ -0.59
SCLT1-202ENST00000439369 NIPSNAP1Q9BPW8 284 aa11.37□□□□□ -0.59
SCLT1-202ENST00000439369 SMURF2Q9HAU4 748 aa11.37□□□□□ -0.59
SCLT1-202ENST00000439369 GP6Q9HCN6 339 aa11.37□□□□□ -0.59
SCLT1-202ENST00000439369 IL20Q9NYY1 176 aa11.37□□□□□ -0.59
SCLT1-202ENST00000439369 MCTS1Q9ULC4 181 aaKnown RBP11.37□□□□□ -0.59
SCLT1-202ENST00000439369 RASD1Q9Y272 281 aa11.37□□□□□ -0.59
SCLT1-202ENST00000439369 CDH10Q9Y6N8 788 aa11.37□□□□□ -0.59
SCLT1-202ENST00000439369 M0R082 166 aa11.36□□□□□ -0.59
SCLT1-202ENST00000439369 PLPP3O14495 311 aa11.36□□□□□ -0.59
SCLT1-202ENST00000439369 CXCL13O43927 109 aa11.36□□□□□ -0.59
SCLT1-202ENST00000439369 PTP4A3O75365 173 aa11.36□□□□□ -0.59
SCLT1-202ENST00000439369 NDUFB2O95178 105 aa11.36□□□□□ -0.59
SCLT1-202ENST00000439369 PTNP21246 168 aa11.36□□□□□ -0.59
SCLT1-202ENST00000439369 ENPP1P22413 925 aa11.36□□□□□ -0.59
SCLT1-202ENST00000439369 VHLP40337 213 aa11.36□□□□□ -0.59
SCLT1-202ENST00000439369 EIF1AXP47813 144 aaKnown RBP11.36□□□□□ -0.59
SCLT1-202ENST00000439369 NFATC3Q12968 1075 aa11.36□□□□□ -0.59
SCLT1-202ENST00000439369 PMS2P3Q13401 168 aa11.36□□□□□ -0.59
SCLT1-202ENST00000439369 PDK3Q15120 406 aa11.36□□□□□ -0.59
SCLT1-202ENST00000439369 POU4F3Q15319 338 aa11.36□□□□□ -0.59
SCLT1-202ENST00000439369 SMARCD3Q6STE5 483 aa11.36□□□□□ -0.59
SCLT1-202ENST00000439369 GFRALQ6UXV0 394 aa11.36□□□□□ -0.59
SCLT1-202ENST00000439369 FGD2Q7Z6J4 655 aa11.36□□□□□ -0.59
SCLT1-202ENST00000439369 ADGRE4PQ86SQ3 457 aa11.36□□□□□ -0.59
SCLT1-202ENST00000439369 ST6GALNAC3Q8NDV1 305 aa11.36□□□□□ -0.59
SCLT1-202ENST00000439369 OR13C2Q8NGS9 318 aa11.36□□□□□ -0.59
SCLT1-202ENST00000439369 ZNF417Q8TAU3 575 aa11.36□□□□□ -0.59
SCLT1-202ENST00000439369 FAM57AQ8TBR7 257 aa11.36□□□□□ -0.59
SCLT1-202ENST00000439369 CPT1CQ8TCG5 803 aa11.36□□□□□ -0.59
SCLT1-202ENST00000439369 MAGEE2Q8TD90 523 aaPredicted RBP11.36□□□□□ -0.59
SCLT1-202ENST00000439369 NRG4Q8WWG1 115 aa11.36□□□□□ -0.59
SCLT1-202ENST00000439369 GPX7Q96SL4 187 aaPredicted RBP11.36□□□□□ -0.59
SCLT1-202ENST00000439369 ZNF587Q96SQ5 575 aaPredicted RBP11.36□□□□□ -0.59
SCLT1-202ENST00000439369 SLC29A1Q99808 456 aa11.36□□□□□ -0.59
SCLT1-202ENST00000439369 TACO1Q9BSH4 297 aaKnown RBP11.36□□□□□ -0.59
SCLT1-202ENST00000439369 SF3B5Q9BWJ5 86 aaKnown RBP11.36□□□□□ -0.59
SCLT1-202ENST00000439369 GABARAPL3Q9BY60 117 aa11.36□□□□□ -0.59
SCLT1-202ENST00000439369 SMPD3Q9NY59 655 aaPredicted RBP11.36□□□□□ -0.59
SCLT1-202ENST00000439369 REV1Q9UBZ9 1251 aa11.36□□□□□ -0.59
SCLT1-202ENST00000439369 CAMK2AQ9UQM7 478 aa11.36□□□□□ -0.59
SCLT1-202ENST00000439369 ZNF835Q9Y2P0 537 aa11.36□□□□□ -0.59
SCLT1-202ENST00000439369 CD8B2A6NJW9 211 aa11.35□□□□□ -0.59
SCLT1-202ENST00000439369 FIGNL2A6NMB9 653 aa11.35□□□□□ -0.59
SCLT1-202ENST00000439369 LRRN3E7EW58 273 aa11.35□□□□□ -0.59
SCLT1-202ENST00000439369 NPIPA2E9PIF3 369 aa11.35□□□□□ -0.59
SCLT1-202ENST00000439369 NPIPA3F8WFD2 350 aa11.35□□□□□ -0.59
SCLT1-202ENST00000439369 WISP2O76076 250 aa11.35□□□□□ -0.59
SCLT1-202ENST00000439369 OR6A2O95222 327 aa11.35□□□□□ -0.59
SCLT1-202ENST00000439369 OPN1LWP04000 364 aa11.35□□□□□ -0.59
SCLT1-202ENST00000439369 APEHP13798 732 aaKnown RBP11.35□□□□□ -0.59
SCLT1-202ENST00000439369 POU2F1P14859 743 aa11.35□□□□□ -0.59
SCLT1-202ENST00000439369 ABOP16442 354 aa11.35□□□□□ -0.59
SCLT1-202ENST00000439369 SLC6A6P31641 620 aa11.35□□□□□ -0.59
SCLT1-202ENST00000439369 HSPA13P48723 471 aa11.35□□□□□ -0.59
SCLT1-202ENST00000439369 SLC16A1P53985 500 aa11.35□□□□□ -0.59
SCLT1-202ENST00000439369 PUDPQ08623 228 aa11.35□□□□□ -0.59
SCLT1-202ENST00000439369 C19orf57Q0VDD7 668 aa11.35□□□□□ -0.59
SCLT1-202ENST00000439369 FHL1Q13642 323 aa11.35□□□□□ -0.59
SCLT1-202ENST00000439369 RNPS1Q15287 305 aaKnown RBP11.35□□□□□ -0.59
SCLT1-202ENST00000439369 LRRC36Q1X8D7 754 aa11.35□□□□□ -0.59
SCLT1-202ENST00000439369 PRR30Q53SZ7 412 aaPredicted RBP11.35□□□□□ -0.59
SCLT1-202ENST00000439369 ABLIM2Q6H8Q1 611 aa11.35□□□□□ -0.59
SCLT1-202ENST00000439369 Q6ZPB1 254 aaPredicted RBP11.35□□□□□ -0.59
SCLT1-202ENST00000439369 PXKQ7Z7A4 578 aa11.35□□□□□ -0.59
SCLT1-202ENST00000439369 LRRC17Q8N6Y2 441 aa11.35□□□□□ -0.59
SCLT1-202ENST00000439369 ANKK1Q8NFD2 765 aa11.35□□□□□ -0.59
SCLT1-202ENST00000439369 OR52L1Q8NGH7 329 aa11.35□□□□□ -0.59
SCLT1-202ENST00000439369 TEX47Q8TBZ9 253 aa11.35□□□□□ -0.59
SCLT1-202ENST00000439369 FANK1Q8TC84 345 aa11.35□□□□□ -0.59
SCLT1-202ENST00000439369 TUBA1CQ9BQE3 449 aa11.35□□□□□ -0.59
SCLT1-202ENST00000439369 SRXN1Q9BYN0 137 aa11.35□□□□□ -0.59
SCLT1-202ENST00000439369 RNF122Q9H9V4 155 aa11.35□□□□□ -0.59
SCLT1-202ENST00000439369 CALHM2Q9HA72 323 aa11.35□□□□□ -0.59
SCLT1-202ENST00000439369 MCCC2Q9HCC0 563 aa11.35□□□□□ -0.59
SCLT1-202ENST00000439369 GLRX2Q9NS18 164 aa11.35□□□□□ -0.59
SCLT1-202ENST00000439369 BAIAP2Q9UQB8 552 aa11.35□□□□□ -0.59
SCLT1-202ENST00000439369 NOX1Q9Y5S8 564 aa11.35□□□□□ -0.59
SCLT1-202ENST00000439369 IGKV3D-15A0A087WSY6 115 aa11.34□□□□□ -0.59
SCLT1-202ENST00000439369 CLCA1A8K7I4 914 aa11.34□□□□□ -0.59
SCLT1-202ENST00000439369 H0YC42 278 aa11.34□□□□□ -0.59
SCLT1-202ENST00000439369 PRRG2O14669 202 aa11.34□□□□□ -0.59
SCLT1-202ENST00000439369 SMAD9O15198 467 aaKnown RBP11.34□□□□□ -0.59
SCLT1-202ENST00000439369 ZZEF1O43149 2961 aa11.34□□□□□ -0.59
SCLT1-202ENST00000439369 IDH3BO43837 385 aa11.34□□□□□ -0.59
SCLT1-202ENST00000439369 CYTIPO60759 359 aa11.34□□□□□ -0.59
SCLT1-202ENST00000439369 AKR7A3O95154 331 aa11.34□□□□□ -0.59
SCLT1-202ENST00000439369 TP53P04637 393 aaPredicted RBP11.34□□□□□ -0.59
SCLT1-202ENST00000439369 P2RY4P51582 365 aa11.34□□□□□ -0.59
SCLT1-202ENST00000439369 CRISP1P54107 249 aa11.34□□□□□ -0.59
SCLT1-202ENST00000439369 TPD52P55327 224 aaPredicted RBP11.34□□□□□ -0.59
SCLT1-202ENST00000439369 HSF1Q00613 529 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms