RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 FBN1P35555 2871 aaKnown RBP6.8□□□□□ -1.32
VPS50-204ENST00000438395 OR6C65A6NJZ3 312 aa6.8□□□□□ -1.32
VPS50-204ENST00000438395 TRPC5OSA6NMA1 111 aa6.8□□□□□ -1.32
VPS50-204ENST00000438395 VSTM5A8MXK1 200 aa6.8□□□□□ -1.32
VPS50-204ENST00000438395 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.8□□□□□ -1.32
VPS50-204ENST00000438395 ATP6V1G2-DDX39BF2Z307 99 aa6.8□□□□□ -1.32
VPS50-204ENST00000438395 HMGN4O00479 90 aa6.8□□□□□ -1.32
VPS50-204ENST00000438395 FAAHO00519 579 aa6.8□□□□□ -1.32
VPS50-204ENST00000438395 RFXANKO14593 260 aa6.8□□□□□ -1.32
VPS50-204ENST00000438395 AP3D1O14617 1153 aa6.8□□□□□ -1.32
VPS50-204ENST00000438395 ITM2AO43736 263 aa6.8□□□□□ -1.32
VPS50-204ENST00000438395 BCAS1O75363 584 aaPredicted RBP6.8□□□□□ -1.32
VPS50-204ENST00000438395 AHSA1O95433 338 aa6.8□□□□□ -1.32
VPS50-204ENST00000438395 CRYAAP02489 173 aa6.8□□□□□ -1.32
VPS50-204ENST00000438395 BGNP21810 368 aa6.8□□□□□ -1.32
VPS50-204ENST00000438395 APOBEC3AP31941 199 aaPredicted RBP6.8□□□□□ -1.32
VPS50-204ENST00000438395 ETV4P43268 484 aa6.8□□□□□ -1.32
VPS50-204ENST00000438395 GZMKP49863 264 aa6.8□□□□□ -1.32
VPS50-204ENST00000438395 PDLIM4P50479 330 aa6.8□□□□□ -1.32
VPS50-204ENST00000438395 PHC1P78364 1004 aa6.8□□□□□ -1.32
VPS50-204ENST00000438395 VLDLRP98155 873 aa6.8□□□□□ -1.32
VPS50-204ENST00000438395 LOXL1Q08397 574 aaPredicted RBP6.8□□□□□ -1.32
VPS50-204ENST00000438395 FUT5Q11128 374 aa6.8□□□□□ -1.32
VPS50-204ENST00000438395 GGTLC2Q14390 218 aa6.8□□□□□ -1.32
VPS50-204ENST00000438395 CASP8Q14790 479 aa6.8□□□□□ -1.32
VPS50-204ENST00000438395 OR7A5Q15622 319 aa6.8□□□□□ -1.32
VPS50-204ENST00000438395 GABRA6Q16445 453 aa6.8□□□□□ -1.32
VPS50-204ENST00000438395 GSTA3Q16772 222 aa6.8□□□□□ -1.32
VPS50-204ENST00000438395 ZSWIM7Q19AV6 140 aa6.8□□□□□ -1.32
VPS50-204ENST00000438395 PRAMEF8Q5VWM4 474 aa6.8□□□□□ -1.32
VPS50-204ENST00000438395 PRAMEF7Q5VXH5 474 aa6.8□□□□□ -1.32
VPS50-204ENST00000438395 CYB5R2Q6BCY4 276 aa6.8□□□□□ -1.32
VPS50-204ENST00000438395 NXNQ6DKJ4 435 aa6.8□□□□□ -1.32
VPS50-204ENST00000438395 TMEM225Q6GV28 225 aa6.8□□□□□ -1.32
VPS50-204ENST00000438395 B3GLCTQ6Y288 498 aa6.8□□□□□ -1.32
VPS50-204ENST00000438395 LRRC74BQ6ZQY2 392 aa6.8□□□□□ -1.32
VPS50-204ENST00000438395 DNM1P46Q6ZS02 220 aa6.8□□□□□ -1.32
VPS50-204ENST00000438395 SPATA19Q7Z5L4 167 aa6.8□□□□□ -1.32
VPS50-204ENST00000438395 CROCCP2Q86T23 111 aa6.8□□□□□ -1.32
VPS50-204ENST00000438395 ADGRG3Q86Y34 549 aa6.8□□□□□ -1.32
VPS50-204ENST00000438395 ANKFN1Q8N957 763 aa6.8□□□□□ -1.32
VPS50-204ENST00000438395 OR9K2Q8NGE7 335 aa6.8□□□□□ -1.32
VPS50-204ENST00000438395 PNPT1Q8TCS8 783 aaKnown RBP6.8□□□□□ -1.32
VPS50-204ENST00000438395 AENQ8WTP8 325 aaKnown RBP6.8□□□□□ -1.32
VPS50-204ENST00000438395 FBXO17Q96EF6 278 aa6.8□□□□□ -1.32
VPS50-204ENST00000438395 MUS81Q96NY9 551 aa6.8□□□□□ -1.32
VPS50-204ENST00000438395 PIMREGQ9BSJ6 248 aa6.8□□□□□ -1.32
VPS50-204ENST00000438395 TMEM109Q9BVC6 243 aa6.8□□□□□ -1.32
VPS50-204ENST00000438395 SF3B5Q9BWJ5 86 aaKnown RBP6.8□□□□□ -1.32
VPS50-204ENST00000438395 KRTAP9-2Q9BYQ4 174 aa6.8□□□□□ -1.32
VPS50-204ENST00000438395 SLC38A1Q9H2H9 487 aa6.8□□□□□ -1.32
VPS50-204ENST00000438395 PCNX3Q9H6A9 2034 aa6.8□□□□□ -1.32
VPS50-204ENST00000438395 OBP2BQ9NPH6 170 aa6.8□□□□□ -1.32
VPS50-204ENST00000438395 SLC7A10Q9NS82 523 aa6.8□□□□□ -1.32
VPS50-204ENST00000438395 TMEM45AQ9NWC5 275 aa6.8□□□□□ -1.32
VPS50-204ENST00000438395 BTNL2Q9UIR0 455 aa6.8□□□□□ -1.32
VPS50-204ENST00000438395 KCNS2Q9ULS6 477 aa6.8□□□□□ -1.32
VPS50-204ENST00000438395 MOKQ9UQ07 419 aa6.8□□□□□ -1.32
VPS50-204ENST00000438395 A0A096LPE4 126 aa6.79□□□□□ -1.32
VPS50-204ENST00000438395 A0A096LPI6 279 aa6.79□□□□□ -1.32
VPS50-204ENST00000438395 A0A1W2PPZ6 126 aa6.79□□□□□ -1.32
VPS50-204ENST00000438395 TMEM72A0PK05 275 aa6.79□□□□□ -1.32
VPS50-204ENST00000438395 LIPT2A6NK58 231 aa6.79□□□□□ -1.32
VPS50-204ENST00000438395 AQP7P3A6NL99 342 aa6.79□□□□□ -1.32
VPS50-204ENST00000438395 NDUFS8O00217 210 aa6.79□□□□□ -1.32
VPS50-204ENST00000438395 KLF11O14901 512 aa6.79□□□□□ -1.32
VPS50-204ENST00000438395 GSC2O15499 205 aa6.79□□□□□ -1.32
VPS50-204ENST00000438395 PHF1O43189 567 aaPredicted RBP6.79□□□□□ -1.32
VPS50-204ENST00000438395 GPRIN2O60269 458 aa6.79□□□□□ -1.32
VPS50-204ENST00000438395 AKR7A3O95154 331 aa6.79□□□□□ -1.32
VPS50-204ENST00000438395 VAMP5O95183 116 aa6.79□□□□□ -1.32
VPS50-204ENST00000438395 GSNP06396 782 aa6.79□□□□□ -1.32
VPS50-204ENST00000438395 PGRP06401 933 aa6.79□□□□□ -1.32
VPS50-204ENST00000438395 CHRM4P08173 479 aa6.79□□□□□ -1.32
VPS50-204ENST00000438395 IDO1P14902 403 aa6.79□□□□□ -1.32
VPS50-204ENST00000438395 CREB1P16220 341 aa6.79□□□□□ -1.32
VPS50-204ENST00000438395 ZNF16P17020 682 aaPredicted RBP6.79□□□□□ -1.32
VPS50-204ENST00000438395 SRD5A1P18405 259 aa6.79□□□□□ -1.32
VPS50-204ENST00000438395 PAX7P23759 505 aa6.79□□□□□ -1.32
VPS50-204ENST00000438395 CRATP43155 626 aa6.79□□□□□ -1.32
VPS50-204ENST00000438395 CRISP3P54108 245 aa6.79□□□□□ -1.32
VPS50-204ENST00000438395 SH3BGRP55822 239 aaPredicted RBP6.79□□□□□ -1.32
VPS50-204ENST00000438395 IL1RL1Q01638 556 aa6.79□□□□□ -1.32
VPS50-204ENST00000438395 EPS8Q12929 822 aa6.79□□□□□ -1.32
VPS50-204ENST00000438395 C1DQ13901 141 aaKnown RBP6.79□□□□□ -1.32
VPS50-204ENST00000438395 CEACAM7Q14002 265 aa6.79□□□□□ -1.32
VPS50-204ENST00000438395 SLC17A1Q14916 467 aa6.79□□□□□ -1.32
VPS50-204ENST00000438395 SYPL1Q16563 259 aa6.79□□□□□ -1.32
VPS50-204ENST00000438395 IQCCQ4KMZ1 466 aa6.79□□□□□ -1.32
VPS50-204ENST00000438395 HIKESHIQ53FT3 197 aa6.79□□□□□ -1.32
VPS50-204ENST00000438395 C6orf10Q5SRN2 563 aa6.79□□□□□ -1.32
VPS50-204ENST00000438395 TSPO2Q5TGU0 170 aa6.79□□□□□ -1.32
VPS50-204ENST00000438395 WBP2NLQ6ICG8 309 aa6.79□□□□□ -1.32
VPS50-204ENST00000438395 C11orf71Q6IPW1 123 aa6.79□□□□□ -1.32
VPS50-204ENST00000438395 FAM166AQ6J272 317 aa6.79□□□□□ -1.32
VPS50-204ENST00000438395 OGFOD2Q6N063 350 aa6.79□□□□□ -1.32
VPS50-204ENST00000438395 ANKRD42Q8N9B4 389 aa6.79□□□□□ -1.32
VPS50-204ENST00000438395 GLB1L3Q8NCI6 653 aaPredicted RBP6.79□□□□□ -1.32
VPS50-204ENST00000438395 ZNF540Q8NDQ6 660 aa6.79□□□□□ -1.32
VPS50-204ENST00000438395 OR10H5Q8NGA6 315 aa6.79□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms