RNA–Protein interactions for RNA: ENST00000436336.6

CPSF4-204, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CPSF4, Length 1,738 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-204ENST00000436336 IL20RAQ9UHF4 553 aa20.68■□□□□ 0.9
CPSF4-204ENST00000436336 LHX6Q9UPM6 363 aa20.68■□□□□ 0.9
CPSF4-204ENST00000436336 DIO1P49895 249 aa20.67■□□□□ 0.9
CPSF4-204ENST00000436336 C19orf57Q0VDD7 668 aa20.67■□□□□ 0.9
CPSF4-204ENST00000436336 PLEKHN1Q494U1 663 aaPredicted RBP20.67■□□□□ 0.9
CPSF4-204ENST00000436336 CLEC12AQ5QGZ9 265 aa20.67■□□□□ 0.9
CPSF4-204ENST00000436336 C12orf73Q69YU5 71 aa20.67■□□□□ 0.9
CPSF4-204ENST00000436336 ESPNLQ6ZVH7 1005 aa20.67■□□□□ 0.9
CPSF4-204ENST00000436336 GGNQ86UU5 652 aa20.67■□□□□ 0.9
CPSF4-204ENST00000436336 NEIL3Q8TAT5 605 aa20.67■□□□□ 0.9
CPSF4-204ENST00000436336 NDEL1Q9GZM8 345 aa20.67■□□□□ 0.9
CPSF4-204ENST00000436336 ENKD1Q9H0I2 346 aa20.67■□□□□ 0.9
CPSF4-204ENST00000436336 LDAHQ9H6V9 325 aa20.67■□□□□ 0.9
CPSF4-204ENST00000436336 HSPE1-MOB4S4R3N1 261 aa20.67■□□□□ 0.9
CPSF4-204ENST00000436336 CACNA1GO43497 2377 aa20.67■□□□□ 0.9
CPSF4-204ENST00000436336 ZNF407Q9C0G0 2248 aa20.67■□□□□ 0.9
CPSF4-204ENST00000436336 M0R082 166 aa20.67■□□□□ 0.9
CPSF4-204ENST00000436336 SULT2B1O00204 365 aa20.67■□□□□ 0.9
CPSF4-204ENST00000436336 ACTL6AO96019 429 aa20.67■□□□□ 0.9
CPSF4-204ENST00000436336 CDC42P60953 191 aa20.67■□□□□ 0.9
CPSF4-204ENST00000436336 GXYLT1Q4G148 440 aa20.67■□□□□ 0.9
CPSF4-204ENST00000436336 TRILQ7L0X0 811 aa20.67■□□□□ 0.9
CPSF4-204ENST00000436336 DEPDC4Q8N2C3 294 aa20.67■□□□□ 0.9
CPSF4-204ENST00000436336 IQCF1Q8N6M8 205 aa20.67■□□□□ 0.9
CPSF4-204ENST00000436336 ZNF417Q8TAU3 575 aa20.67■□□□□ 0.9
CPSF4-204ENST00000436336 TAAR6Q96RI8 345 aa20.67■□□□□ 0.9
CPSF4-204ENST00000436336 ZNF587Q96SQ5 575 aaPredicted RBP20.67■□□□□ 0.9
CPSF4-204ENST00000436336 TEX12Q9BXU0 123 aa20.67■□□□□ 0.9
CPSF4-204ENST00000436336 ZNF71Q9NQZ8 489 aaPredicted RBP20.67■□□□□ 0.9
CPSF4-204ENST00000436336 TRGV5A0A0B4J1U4 118 aa20.66■□□□□ 0.9
CPSF4-204ENST00000436336 A0A0J9YW62 118 aa20.66■□□□□ 0.9
CPSF4-204ENST00000436336 BHLHE40O14503 412 aa20.66■□□□□ 0.9
CPSF4-204ENST00000436336 IGHG3P01860 377 aa20.66■□□□□ 0.9
CPSF4-204ENST00000436336 AQP2P41181 271 aa20.66■□□□□ 0.9
CPSF4-204ENST00000436336 STARP49675 285 aa20.66■□□□□ 0.9
CPSF4-204ENST00000436336 CLDN20P56880 219 aa20.66■□□□□ 0.9
CPSF4-204ENST00000436336 OR2B6P58173 313 aa20.66■□□□□ 0.9
CPSF4-204ENST00000436336 CSNK2A1P68400 391 aaPredicted RBP20.66■□□□□ 0.9
CPSF4-204ENST00000436336 SLC35A1P78382 337 aa20.66■□□□□ 0.9
CPSF4-204ENST00000436336 RPL18Q07020 188 aaKnown RBP20.66■□□□□ 0.9
CPSF4-204ENST00000436336 PMS2P3Q13401 168 aa20.66■□□□□ 0.9
CPSF4-204ENST00000436336 ALG10Q5BKT4 473 aa20.66■□□□□ 0.9
CPSF4-204ENST00000436336 ACSM5Q6NUN0 579 aa20.66■□□□□ 0.9
CPSF4-204ENST00000436336 CASP12Q6UXS9 341 aa20.66■□□□□ 0.9
CPSF4-204ENST00000436336 CCDC71Q8IV32 467 aaPredicted RBP20.66■□□□□ 0.9
CPSF4-204ENST00000436336 OR4Q3Q8NH05 313 aa20.66■□□□□ 0.9
CPSF4-204ENST00000436336 MOSPD2Q8NHP6 518 aa20.66■□□□□ 0.9
CPSF4-204ENST00000436336 FAM81AQ8TBF8 368 aa20.66■□□□□ 0.9
CPSF4-204ENST00000436336 PNPLA2Q96AD5 504 aa20.66■□□□□ 0.9
CPSF4-204ENST00000436336 GPX7Q96SL4 187 aaPredicted RBP20.66■□□□□ 0.9
CPSF4-204ENST00000436336 IFT27Q9BW83 186 aa20.66■□□□□ 0.9
CPSF4-204ENST00000436336 PRRG3Q9BZD7 231 aa20.66■□□□□ 0.9
CPSF4-204ENST00000436336 CHST11Q9NPF2 352 aa20.66■□□□□ 0.9
CPSF4-204ENST00000436336 TAS2R5Q9NYW4 299 aa20.66■□□□□ 0.9
CPSF4-204ENST00000436336 SEC14L4Q9UDX3 406 aa20.66■□□□□ 0.9
CPSF4-204ENST00000436336 ZMIZ1Q9ULJ6 1067 aa20.66■□□□□ 0.9
CPSF4-204ENST00000436336 BAIAP2Q9UQB8 552 aa20.66■□□□□ 0.9
CPSF4-204ENST00000436336 B3GALT5Q9Y2C3 310 aa20.66■□□□□ 0.9
CPSF4-204ENST00000436336 LIPGQ9Y5X9 500 aa20.66■□□□□ 0.9
CPSF4-204ENST00000436336 DNAJC13O75165 2243 aa20.66■□□□□ 0.9
CPSF4-204ENST00000436336 LHX2P50458 406 aa20.65■□□□□ 0.9
CPSF4-204ENST00000436336 BCL2A1Q16548 175 aa20.65■□□□□ 0.9
CPSF4-204ENST00000436336 CTU2Q2VPK5 515 aaKnown RBP20.65■□□□□ 0.9
CPSF4-204ENST00000436336 PGGHGQ32M88 737 aa20.65■□□□□ 0.9
CPSF4-204ENST00000436336 KRT80Q6KB66 452 aa20.65■□□□□ 0.9
CPSF4-204ENST00000436336 DPY19L2P2Q6ZN68 376 aa20.65■□□□□ 0.9
CPSF4-204ENST00000436336 H1FNTQ75WM6 255 aaPredicted RBP20.65■□□□□ 0.9
CPSF4-204ENST00000436336 THAP5Q7Z6K1 395 aa20.65■□□□□ 0.9
CPSF4-204ENST00000436336 LNX2Q8N448 690 aa20.65■□□□□ 0.9
CPSF4-204ENST00000436336 LRRC75AQ8NAA5 344 aa20.65■□□□□ 0.9
CPSF4-204ENST00000436336 ABTB1Q969K4 478 aaPredicted RBP20.65■□□□□ 0.9
CPSF4-204ENST00000436336 MCIDASD6RGH6 385 aa20.64■□□□□ 0.9
CPSF4-204ENST00000436336 PLPP3O14495 311 aa20.64■□□□□ 0.9
CPSF4-204ENST00000436336 EIF1AYO14602 144 aaKnown RBP20.64■□□□□ 0.9
CPSF4-204ENST00000436336 TNFSF11O14788 317 aa20.64■□□□□ 0.9
CPSF4-204ENST00000436336 SEC14L5O43304 696 aa20.64■□□□□ 0.9
CPSF4-204ENST00000436336 DNPH1O43598 174 aa20.64■□□□□ 0.9
CPSF4-204ENST00000436336 OR6A2O95222 327 aa20.64■□□□□ 0.9
CPSF4-204ENST00000436336 ADORA3P0DMS8 318 aa20.64■□□□□ 0.9
CPSF4-204ENST00000436336 RPL4P36578 427 aaKnown RBP20.64■□□□□ 0.9
CPSF4-204ENST00000436336 ISL1P61371 349 aa20.64■□□□□ 0.9
CPSF4-204ENST00000436336 IL5RAQ01344 420 aa20.64■□□□□ 0.9
CPSF4-204ENST00000436336 PDSS1Q5T2R2 415 aa20.64■□□□□ 0.9
CPSF4-204ENST00000436336 ADPRHL1Q8NDY3 354 aa20.64■□□□□ 0.9
CPSF4-204ENST00000436336 ADGRG7Q96K78 797 aa20.64■□□□□ 0.9
CPSF4-204ENST00000436336 EXO5Q9H790 373 aa20.64■□□□□ 0.9
CPSF4-204ENST00000436336 IMPAD1Q9NX62 359 aa20.64■□□□□ 0.9
CPSF4-204ENST00000436336 AKR7A3O95154 331 aa20.64■□□□□ 0.89
CPSF4-204ENST00000436336 HMGN1P05114 100 aa20.64■□□□□ 0.89
CPSF4-204ENST00000436336 ZNF708P17019 499 aa20.64■□□□□ 0.89
CPSF4-204ENST00000436336 GRK5P34947 590 aa20.64■□□□□ 0.89
CPSF4-204ENST00000436336 SUCLG1P53597 346 aaKnown RBP20.64■□□□□ 0.89
CPSF4-204ENST00000436336 ZP4Q12836 540 aa20.64■□□□□ 0.89
CPSF4-204ENST00000436336 PDK3Q15120 406 aa20.64■□□□□ 0.89
CPSF4-204ENST00000436336 ZNF239Q16600 458 aaKnown RBP20.64■□□□□ 0.89
CPSF4-204ENST00000436336 NADK2Q4G0N4 442 aa20.64■□□□□ 0.89
CPSF4-204ENST00000436336 VASNQ6EMK4 673 aa20.64■□□□□ 0.89
CPSF4-204ENST00000436336 UBQLNLQ8IYU4 475 aa20.64■□□□□ 0.89
CPSF4-204ENST00000436336 OR2V1Q8NHB1 315 aa20.64■□□□□ 0.89
CPSF4-204ENST00000436336 SLC38A2Q96QD8 506 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms